[Hub]/) : Traits : Arm predicted mass (right) : ← →

chr19:9,637,688-11,459,260

Best TWAS P=1.95e-14 · Best GWAS P=2.11e-14 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex S1PR2 0.07 0.02 bslmm 369 0.03 5.3e-05 -4.7 5.3 1.5e-07 0.31 0.32 0.14 FALSE
2 GTEx Esophagus Mucosa SLC44A2 0.13 0.00 lasso 6 0.02 1.4e-02 4.7 -5.7 1.5e-08 -0.46 0.07 0.57 FALSE
3 GTEx Esophagus Mucosa ILF3-AS1 0.11 0.00 lasso 4 0.00 2.5e-01 7.5 -6.1 8.7e-10 -0.77 0.02 0.87 FALSE
4 GTEx Muscle Skeletal SLC44A2 0.19 0.18 lasso 5 0.19 5.1e-18 6.2 6.8 1.4e-11 0.79 0.82 0.18 FALSE
5 GTEx Nerve Tibial ILF3-AS1 0.14 0.04 lasso 3 0.08 3.8e-06 7.5 -6.3 3.1e-10 -0.77 0.01 0.98 FALSE
6 GTEx Testis PDE4A 0.20 0.02 enet 39 0.04 6.4e-03 5.4 6.0 2.2e-09 0.06 0.06 0.04 TRUE
7 GTEx Vagina CTD-2369P2.2 0.50 -0.01 lasso 9 0.01 2.0e-01 4.8 5.4 7.3e-08 0.01 0.22 0.11 TRUE
8 GTEx Whole Blood CTD-2369P2.8 0.12 0.11 lasso 3 0.10 9.2e-10 6.4 6.9 6.0e-12 0.06 0.97 0.03 TRUE
9 The Cancer Genome Atlas Breast Invasive Carcinoma S1PR2 0.02 0.00 blup 32 0.01 1.5e-02 -5.0 5.4 5.8e-08 0.04 0.00 0.36 TRUE
10 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma FDX1L 0.06 0.02 lasso 3 0.04 2.4e-05 -4.3 -5.3 9.6e-08 -0.04 0.11 0.44 FALSE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LOC147727 0.13 0.02 blup 28 0.04 7.2e-05 7.5 -5.8 6.0e-09 -0.76 0.01 0.90 FALSE
12 The Cancer Genome Atlas Brain Lower Grade Glioma FDX1L 0.06 0.00 blup 53 0.02 5.1e-03 -4.3 -6.1 1.2e-09 0.05 0.01 0.37 FALSE
13 The Cancer Genome Atlas Brain Lower Grade Glioma LOC147727 0.07 0.02 lasso 2 0.02 5.4e-03 7.5 -7.7 1.9e-14 -0.99 0.01 0.86 TRUE
14 The Cancer Genome Atlas Thyroid Carcinoma SLC44A2 0.32 0.22 enet 14 0.25 3.8e-24 7.0 5.5 4.8e-08 0.85 0.30 0.70 FALSE