[Hub]/) : Traits : Trunk fat percentage : ← →

chr11:63,295,034-64,761,779

Best TWAS P=2.56e-09 · Best GWAS P=1.02e-08 conditioned to 0.0599

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Visceral Omentum TRPT1 0.16 0.05 lasso 5 0.04 3.0e-03 -4.8 -5.4 6.3e-08 0.60 0.08 0.43 FALSE
2 GTEx Colon Transverse TRPT1 0.24 0.20 lasso 5 0.17 1.6e-08 -5.2 -5.1 2.9e-07 0.56 0.06 0.94 FALSE
3 GTEx Esophagus Mucosa PLCB3 0.28 0.24 lasso 6 0.23 1.1e-15 -5.7 5.2 2.4e-07 -0.94 0.00 1.00 FALSE
4 GTEx Esophagus Muscularis TRPT1 0.20 0.12 enet 18 0.15 2.3e-09 -5.0 -5.1 3.0e-07 0.67 0.09 0.91 FALSE
5 ROSMAP Brain Pre-frontal Cortex KCNK4 0.14 0.12 bslmm 334 0.11 3.0e-14 -5.3 -5.5 4.2e-08 0.96 0.00 1.00 FALSE
6 ROSMAP Brain Pre-frontal Cortex TEX40 0.25 0.23 lasso 3 0.23 2.5e-29 -5.7 5.7 1.4e-08 -1.00 0.00 1.00 FALSE
7 ROSMAP Brain Pre-frontal Cortex RP11-783K16.10 0.07 0.05 lasso 6 0.06 9.6e-08 -5.7 5.6 2.7e-08 -0.99 0.00 1.00 FALSE
8 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C11orf20 0.06 0.03 lasso 3 0.02 7.2e-04 -5.6 5.4 5.3e-08 -0.94 0.00 0.98 FALSE
9 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C11orf20 0.07 0.07 lasso 4 0.07 6.4e-08 -5.7 5.7 1.2e-08 -1.00 0.00 1.00 FALSE
10 The Cancer Genome Atlas Lung Squamous Cell Carcinoma C11orf20 0.04 0.03 lasso 2 0.03 4.2e-04 -5.3 5.3 1.4e-07 -0.96 0.00 0.99 FALSE
11 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma VEGFB 0.04 0.04 blup 47 0.02 8.9e-03 -5.1 6.0 2.6e-09 -0.75 0.02 0.60 TRUE
12 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma VEGFB 0.09 0.10 lasso 7 0.07 1.0e-03 -5.2 5.2 1.6e-07 -0.59 0.03 0.69 FALSE
13 The Cancer Genome Atlas Thyroid Carcinoma PRDX5 0.05 0.04 lasso 3 0.02 1.6e-03 -5.7 5.7 1.2e-08 -0.98 0.00 0.94 FALSE