[Hub]/) : Traits : Trunk fat percentage : ← →

chr11:65,151,449-68,077,666

Best TWAS P=4.22e-11 · Best GWAS P=4.29e-13 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	PTPRCAP	0.05	0.07	enet	12	0.07	6.0e-09	-5.2	5.3	9.2e-08	-0.29	0.14	0.86	FALSE
2	GTEx	Adipose Subcutaneous	RAD9A	0.43	0.22	lasso	6	0.23	7.1e-19	-5.6	-5.5	3.3e-08	0.18	0.03	0.97	FALSE
3	GTEx	Adipose Subcutaneous	AP003419.16	0.05	0.08	lasso	1	0.07	1.7e-06	-5.3	5.3	1.1e-07	-0.28	0.09	0.90	FALSE
4	GTEx	Adipose Visceral Omentum	GSTP1	0.11	0.12	lasso	7	0.10	6.7e-06	-5.6	5.2	1.7e-07	-0.21	0.04	0.96	FALSE
5	GTEx	Adipose Visceral Omentum	RPS6KB2	0.08	0.03	lasso	8	0.04	2.9e-03	-5.3	5.8	8.9e-09	-0.26	0.03	0.94	FALSE
6	GTEx	Adipose Visceral Omentum	PTPRCAP	0.10	0.08	enet	7	0.06	4.8e-04	-5.3	5.4	5.4e-08	-0.30	0.11	0.84	FALSE
7	GTEx	Adipose Visceral Omentum	AP003419.16	0.09	0.05	enet	8	0.04	4.6e-03	-5.3	5.6	2.4e-08	-0.28	0.02	0.94	FALSE
8	GTEx	Artery Aorta	GSTP1	0.10	0.07	enet	14	0.10	5.4e-06	-5.7	5.6	2.5e-08	-0.21	0.05	0.93	FALSE
9	GTEx	Artery Aorta	PTPRCAP	0.11	0.07	enet	9	0.08	3.6e-05	-5.3	5.2	2.1e-07	-0.28	0.04	0.94	FALSE
10	GTEx	Artery Aorta	AP003419.16	0.16	0.10	lasso	3	0.10	4.5e-06	-5.3	5.3	1.1e-07	-0.28	0.11	0.87	FALSE
11	GTEx	Artery Tibial	GSTP1	0.09	0.07	enet	8	0.11	7.4e-09	-5.6	5.2	1.7e-07	-0.20	0.04	0.96	FALSE
12	GTEx	Artery Tibial	RAD9A	0.39	0.26	lasso	2	0.24	3.5e-19	-5.6	-5.6	2.6e-08	0.18	0.03	0.97	FALSE
13	GTEx	Artery Tibial	RPS6KB2	0.10	0.10	lasso	1	0.10	5.9e-08	-5.3	5.3	8.8e-08	-0.28	0.08	0.92	FALSE
14	GTEx	Artery Tibial	PTPRCAP	0.18	0.25	lasso	7	0.24	5.9e-19	-5.2	5.2	1.5e-07	-0.28	0.18	0.82	FALSE
15	GTEx	Artery Tibial	AP003419.16	0.11	0.13	lasso	2	0.12	2.2e-09	-5.3	5.4	7.7e-08	-0.28	0.09	0.91	FALSE
16	GTEx	Brain Caudate basal ganglia	GSTP1	0.16	0.14	lasso	3	0.16	2.8e-05	4.6	5.3	8.6e-08	-0.24	0.02	0.90	FALSE
17	GTEx	Brain Caudate basal ganglia	PTPRCAP	0.23	0.19	lasso	4	0.21	1.0e-06	-5.3	5.5	3.1e-08	-0.28	0.03	0.96	FALSE
18	GTEx	Brain Cerebellar Hemisphere	GSTP1	0.25	0.15	enet	16	0.20	8.7e-06	-4.7	6.0	1.5e-09	-0.23	0.07	0.92	FALSE
19	GTEx	Brain Cerebellar Hemisphere	PTPRCAP	0.39	0.43	lasso	8	0.47	7.7e-14	-5.5	5.5	3.1e-08	-0.28	0.03	0.97	FALSE
20	GTEx	Brain Cerebellar Hemisphere	AP003419.16	0.20	0.01	lasso	4	0.05	1.7e-02	-5.4	5.6	2.6e-08	-0.21	0.03	0.44	FALSE
21	GTEx	Brain Cerebellum	NDUFV1	0.19	0.01	enet	29	0.05	1.7e-02	4.5	-5.8	6.7e-09	0.20	0.05	0.33	FALSE
22	GTEx	Brain Cerebellum	PTPRCAP	0.39	0.48	lasso	7	0.46	3.8e-15	-5.3	5.5	5.0e-08	-0.29	0.03	0.97	FALSE
23	GTEx	Brain Frontal Cortex BA9	GSTP1	0.28	0.19	lasso	5	0.16	3.8e-05	-5.6	5.4	7.9e-08	-0.20	0.04	0.92	TRUE
24	GTEx	Brain Frontal Cortex BA9	PTPRCAP	0.21	0.11	enet	15	0.15	9.6e-05	-5.3	5.7	1.4e-08	-0.29	0.03	0.95	FALSE
25	GTEx	Brain Hippocampus	PTPRCAP	0.16	0.13	lasso	4	0.18	6.2e-05	-5.5	5.5	3.7e-08	-0.26	0.02	0.86	FALSE
26	GTEx	Brain Hypothalamus	GSTP1	0.29	0.28	lasso	3	0.26	9.3e-07	-5.7	5.7	1.4e-08	-0.20	0.03	0.94	FALSE
27	GTEx	Brain Hypothalamus	PTPRCAP	0.17	0.21	lasso	4	0.19	3.1e-05	-5.3	5.5	5.0e-08	-0.29	0.04	0.89	FALSE
28	GTEx	Brain Nucleus accumbens basal ganglia	GSTP1	0.23	0.11	lasso	5	0.14	1.8e-04	-5.6	5.8	8.4e-09	-0.23	0.03	0.94	FALSE
29	GTEx	Brain Nucleus accumbens basal ganglia	PTPRCAP	0.35	0.36	lasso	7	0.38	2.7e-11	-5.3	5.3	9.9e-08	-0.29	0.10	0.90	FALSE
30	GTEx	Brain Putamen basal ganglia	PTPRCAP	0.24	0.26	lasso	4	0.22	6.2e-06	-5.3	5.3	1.1e-07	-0.28	0.06	0.90	FALSE
31	GTEx	Breast Mammary Tissue	GSTP1	0.23	0.14	lasso	5	0.13	4.7e-07	-5.4	5.1	3.1e-07	-0.20	0.05	0.95	FALSE
32	GTEx	Breast Mammary Tissue	PTPRCAP	0.18	0.26	lasso	3	0.24	2.0e-12	-5.3	5.4	7.6e-08	-0.28	0.16	0.84	FALSE
33	GTEx	Breast Mammary Tissue	AP003419.16	0.19	0.06	lasso	5	0.05	2.3e-03	-5.4	5.4	7.8e-08	-0.30	0.04	0.77	FALSE
34	GTEx	Breast Mammary Tissue (Male)	GSTP1	0.11	-0.01	lasso	2	-0.01	7.7e-01	-5.0	6.1	1.3e-09	-0.21	0.02	0.23	FALSE
35	GTEx	Breast Mammary Tissue (Male)	NDUFV1	0.11	0.05	enet	8	0.03	5.6e-02	4.6	-5.5	5.0e-08	0.26	0.05	0.35	FALSE
36	GTEx	Breast Mammary Tissue (Female)	GSTP1	0.26	0.10	lasso	1	0.09	1.2e-03	-5.4	5.4	8.1e-08	-0.20	0.04	0.53	FALSE
37	GTEx	Cells Transformed fibroblasts	RPS6KB2	0.19	0.28	lasso	3	0.27	1.7e-20	-5.3	5.4	6.3e-08	-0.28	0.12	0.88	FALSE
38	GTEx	Cells Transformed fibroblasts	AP003419.16	0.21	0.22	lasso	6	0.21	1.6e-15	-5.3	5.6	2.6e-08	-0.28	0.11	0.89	FALSE
39	GTEx	Colon Sigmoid	GSTP1	0.19	0.21	enet	11	0.19	2.7e-07	-5.6	5.3	8.6e-08	-0.18	0.04	0.96	FALSE
40	GTEx	Colon Transverse	PTPRCAP	0.14	0.06	lasso	7	0.07	3.8e-04	-5.3	5.2	2.4e-07	-0.28	0.07	0.90	FALSE
41	GTEx	Esophagus Gastroesophageal Junction	AP003419.16	0.25	0.18	lasso	16	0.18	6.7e-07	-5.3	5.2	2.3e-07	-0.28	0.12	0.87	FALSE
42	GTEx	Esophagus Mucosa	RPS6KB2	0.12	0.09	lasso	3	0.11	1.1e-07	-5.3	5.6	2.6e-08	-0.27	0.04	0.96	FALSE
43	GTEx	Esophagus Mucosa	AP003419.16	0.18	0.15	lasso	3	0.18	7.8e-12	-5.3	5.5	2.8e-08	-0.28	0.06	0.94	FALSE
44	GTEx	Esophagus Muscularis	GSTP1	0.16	0.18	lasso	3	0.16	9.1e-10	-5.4	5.5	2.9e-08	-0.20	0.08	0.92	FALSE
45	GTEx	Esophagus Muscularis	RAD9A	0.25	0.26	lasso	2	0.26	6.2e-16	-5.6	-5.2	1.9e-07	0.15	0.03	0.97	FALSE
46	GTEx	Esophagus Muscularis	PTPRCAP	0.21	0.26	lasso	4	0.26	9.2e-16	-5.2	5.3	1.3e-07	-0.28	0.17	0.83	FALSE
47	GTEx	Esophagus Muscularis	CTD-3074O7.5	0.22	0.02	enet	17	0.09	3.7e-06	-2.0	5.8	6.0e-09	-0.50	0.25	0.55	TRUE
48	GTEx	Esophagus Muscularis	AP003419.16	0.19	0.17	lasso	3	0.18	7.3e-11	-5.3	5.3	1.1e-07	-0.28	0.11	0.89	FALSE
49	GTEx	Heart Atrial Appendage	RPS6KB2	0.16	0.09	lasso	9	0.07	3.5e-04	-5.3	5.6	2.7e-08	-0.28	0.06	0.89	FALSE
50	GTEx	Heart Atrial Appendage	PTPRCAP	0.14	0.11	lasso	10	0.09	5.1e-05	-5.3	6.3	3.9e-10	-0.29	0.06	0.90	FALSE
51	GTEx	Heart Atrial Appendage	AP003419.16	0.11	0.10	lasso	5	0.12	4.4e-06	-5.3	5.3	1.4e-07	-0.28	0.06	0.93	FALSE
52	GTEx	Heart Left Ventricle	RPS6KB2	0.14	0.14	lasso	4	0.15	2.6e-08	-5.3	5.3	1.1e-07	-0.28	0.14	0.86	FALSE
53	GTEx	Heart Left Ventricle	AP003419.16	0.19	0.16	lasso	5	0.16	6.8e-09	-5.3	5.3	1.5e-07	-0.28	0.12	0.88	FALSE
54	GTEx	Liver	CDK2AP2	0.30	-0.01	lasso	7	-0.01	4.9e-01	-3.8	-5.5	3.1e-08	0.25	0.03	0.38	FALSE
55	GTEx	Muscle Skeletal	GSTP1	0.07	0.08	lasso	9	0.07	1.0e-07	-5.4	5.5	3.9e-08	-0.23	0.10	0.90	FALSE
56	GTEx	Muscle Skeletal	RPS6KB2	0.17	0.20	lasso	3	0.20	8.3e-19	-5.3	5.3	1.2e-07	-0.28	0.12	0.88	FALSE
57	GTEx	Muscle Skeletal	PTPRCAP	0.09	0.08	lasso	6	0.09	2.6e-09	-5.3	5.4	6.8e-08	-0.27	0.17	0.83	FALSE
58	GTEx	Muscle Skeletal	AP003419.16	0.19	0.21	lasso	2	0.20	1.4e-19	-5.3	5.4	8.4e-08	-0.28	0.12	0.88	FALSE
59	GTEx	Nerve Tibial	RAD9A	0.53	0.24	lasso	10	0.23	5.6e-16	-5.6	-5.7	1.2e-08	0.18	0.03	0.97	FALSE
60	GTEx	Nerve Tibial	PTPRCAP	0.33	0.38	enet	14	0.47	2.1e-37	-5.2	5.3	8.7e-08	-0.28	0.18	0.82	FALSE
61	GTEx	Ovary	PTPRCAP	0.35	0.28	enet	13	0.26	5.3e-07	-5.3	5.4	5.6e-08	-0.29	0.07	0.91	FALSE
62	GTEx	Pancreas	AP003419.16	0.11	0.05	enet	14	0.07	8.4e-04	-5.3	5.6	2.1e-08	-0.29	0.08	0.86	FALSE
63	GTEx	Pituitary	PTPRCAP	0.24	0.33	lasso	6	0.26	4.0e-07	-5.3	5.4	5.6e-08	-0.29	0.04	0.95	FALSE
64	GTEx	Skin Not Sun Exposed Suprapubic	RPS6KB2	0.11	0.00	lasso	6	0.00	2.3e-01	-4.8	5.2	2.0e-07	-0.16	0.02	0.42	FALSE
65	GTEx	Skin Not Sun Exposed Suprapubic	PTPRCAP	0.22	0.14	enet	19	0.15	1.8e-08	-5.2	5.7	1.6e-08	-0.28	0.06	0.94	FALSE
66	GTEx	Skin Not Sun Exposed Suprapubic	AP003419.16	0.15	0.08	lasso	5	0.08	6.2e-05	-5.5	6.0	2.0e-09	-0.27	0.02	0.96	FALSE
67	GTEx	Skin Sun Exposed Lower leg	AP003419.16	0.14	0.14	lasso	6	0.13	9.4e-11	-5.3	5.3	1.4e-07	-0.29	0.09	0.91	FALSE
68	GTEx	Stomach	AP003419.16	0.12	0.11	lasso	4	0.08	1.4e-04	-5.3	5.3	9.9e-08	-0.29	0.04	0.89	FALSE
69	GTEx	Testis	GSTP1	0.09	0.11	lasso	2	0.08	3.1e-04	-5.4	5.4	8.0e-08	-0.20	0.05	0.91	FALSE
70	GTEx	Testis	AIP	0.11	0.14	lasso	2	0.11	1.5e-05	-5.3	5.5	4.8e-08	-0.27	0.08	0.90	FALSE
71	GTEx	Testis	RAD9A	0.72	0.50	lasso	4	0.49	1.1e-24	-5.6	-5.6	2.4e-08	0.18	0.03	0.97	FALSE
72	GTEx	Testis	RPS6KB2	0.20	0.16	lasso	11	0.16	8.3e-08	-5.3	5.5	3.5e-08	-0.29	0.04	0.96	FALSE
73	GTEx	Testis	AP003419.16	0.22	0.18	lasso	8	0.18	1.3e-08	-5.3	5.4	6.8e-08	-0.29	0.07	0.93	FALSE
74	GTEx	Thyroid	PTPRCAP	0.17	0.19	lasso	4	0.21	1.1e-15	-5.2	5.3	1.3e-07	-0.28	0.18	0.82	FALSE
75	GTEx	Uterus	PACS1	0.21	-0.01	enet	21	0.05	3.6e-02	3.5	-5.3	1.3e-07	0.38	0.07	0.26	TRUE
76	GTEx	Uterus	PTPRCAP	0.28	0.15	lasso	5	0.15	5.5e-04	-5.4	5.7	1.2e-08	-0.29	0.02	0.83	FALSE
77	GTEx	Vagina	PTPRCAP	0.33	0.05	enet	8	0.06	2.0e-02	-5.3	5.7	1.1e-08	-0.29	0.02	0.80	FALSE
78	METSIM	Adipose	GSTP1	0.05	0.05	lasso	6	0.04	9.3e-07	-5.7	5.7	9.5e-09	-0.22	0.03	0.97	FALSE
79	METSIM	Adipose	PTPRCAP	0.03	0.02	lasso	4	0.02	1.7e-04	-5.4	5.6	2.2e-08	-0.29	0.07	0.91	FALSE
80	ROSMAP	Brain Pre-frontal Cortex	GSTP1	0.25	0.38	lasso	7	0.42	6.1e-58	-5.6	5.4	7.7e-08	-0.21	0.04	0.96	TRUE
81	ROSMAP	Brain Pre-frontal Cortex	CDK2AP2	0.03	0.02	enet	11	0.03	1.6e-04	-4.9	6.6	4.2e-11	-0.22	0.06	0.91	TRUE
82	ROSMAP	Brain Pre-frontal Cortex	RPS6KB2	0.24	0.37	lasso	5	0.37	7.2e-50	-5.2	5.2	1.9e-07	-0.28	0.17	0.82	FALSE
83	ROSMAP	Brain Pre-frontal Cortex	PTPRCAP	0.31	0.47	enet	14	0.47	2.7e-68	-5.3	5.3	1.1e-07	-0.28	0.17	0.83	FALSE
84	YFS	Blood	RPS6KB2	0.04	0.05	lasso	7	0.05	6.7e-17	-5.2	5.2	1.8e-07	-0.28	0.17	0.83	FALSE
85	The Cancer Genome Atlas	Breast Invasive Carcinoma	RPS6KB2	0.05	0.06	lasso	3	0.06	1.1e-12	-5.5	5.5	4.2e-08	-0.29	0.01	0.99	FALSE
86	The Cancer Genome Atlas	Colon Adenocarcinoma	RPS6KB2	0.11	0.12	lasso	6	0.10	1.2e-06	-5.3	5.3	1.2e-07	-0.28	0.02	0.98	FALSE
87	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CNIH2	0.03	0.00	enet	4	0.02	6.4e-03	-4.6	5.2	1.8e-07	-0.58	0.06	0.12	FALSE
88	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	RPS6KB2	0.09	0.16	enet	9	0.15	2.1e-16	-5.3	5.3	1.3e-07	-0.28	0.02	0.98	FALSE
89	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	GSTP1	0.04	0.05	lasso	5	0.04	1.7e-03	-5.6	5.7	1.3e-08	-0.19	0.01	0.94	FALSE
90	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	PTPRCAP	0.05	0.04	enet	3	0.03	1.2e-02	-5.4	5.7	1.2e-08	-0.27	0.01	0.78	FALSE
91	The Cancer Genome Atlas	Brain Lower Grade Glioma	GSTP1	0.11	0.08	enet	5	0.07	7.2e-09	-5.6	5.5	4.2e-08	-0.20	0.01	0.99	FALSE
92	The Cancer Genome Atlas	Lung Adenocarcinoma	RPS6KB2	0.05	0.07	lasso	4	0.06	6.2e-08	-5.5	5.6	2.5e-08	-0.29	0.01	0.99	FALSE
93	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	RPS6KB2	0.05	0.05	lasso	6	0.04	1.2e-05	-5.3	5.4	7.7e-08	-0.28	0.02	0.98	FALSE
94	The Cancer Genome Atlas	Prostate Adenocarcinoma	PTPRCAP	0.08	0.10	lasso	2	0.10	7.8e-11	-5.2	5.2	1.5e-07	-0.28	0.02	0.98	FALSE
95	The Cancer Genome Atlas	Prostate Adenocarcinoma	RPS6KB2	0.09	0.13	lasso	6	0.13	7.1e-14	-5.3	5.4	6.6e-08	-0.26	0.01	0.98	FALSE
96	The Cancer Genome Atlas	Soft Tissue Sarcoma	RPS6KB2	0.05	0.04	lasso	2	0.04	2.1e-03	-5.3	5.3	1.1e-07	-0.28	0.01	0.94	FALSE
97	The Cancer Genome Atlas	Stomach Adenocarcinoma	RPS6KB2	0.10	0.11	lasso	4	0.10	8.6e-08	-5.3	5.3	1.3e-07	-0.28	0.02	0.98	TRUE
98	The Cancer Genome Atlas	Testicular Germ Cell Tumors	RPS6KB2	0.12	0.06	blup	35	0.05	5.4e-03	-5.5	6.1	1.4e-09	-0.28	0.01	0.81	FALSE
99	The Cancer Genome Atlas	Testicular Germ Cell Tumors	TBC1D10C	0.12	0.05	lasso	5	0.03	3.0e-02	-5.3	5.3	1.2e-07	-0.28	0.01	0.80	FALSE
100	The Cancer Genome Atlas	Thyroid Carcinoma	NDUFV1	0.03	0.00	blup	43	0.01	6.7e-02	-4.9	-5.4	7.7e-08	0.21	0.01	0.89	FALSE