[Hub]/) : Traits : Trunk fat-free mass : ← →

chr5:41,211,789-44,208,409

Best TWAS P=9.85e-25 · Best GWAS P=8.02e-27 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
18	YFS	Blood	CCDC152	0.07	0.06	enet	16	0.06	2.0e-19	10.0	10.3	9.8e-25	0.47	0.80	0.20	TRUE
23	The Cancer Genome Atlas	Prostate Adenocarcinoma	GHR	0.12	0.11	enet	6	0.13	2.5e-13	-7.8	-8.7	2.2e-18	-0.26	1.00	0.00	TRUE
11	GTEx	Esophagus Muscularis	CCDC152	0.13	0.09	lasso	8	0.10	7.9e-07	8.8	8.6	7.4e-18	0.48	0.80	0.17	TRUE
20	The Cancer Genome Atlas	Breast Invasive Carcinoma	SEPP1	0.01	0.00	enet	7	0.01	1.5e-03	9.6	-7.9	4.1e-15	-0.39	0.02	0.56	TRUE
12	GTEx	Nerve Tibial	CCDC152	0.16	0.06	enet	25	0.06	2.9e-05	9.9	6.3	2.3e-10	0.19	0.84	0.10	TRUE
9	GTEx	Brain Frontal Cortex BA9	GHR	0.14	0.02	lasso	9	0.06	9.9e-03	7.7	-5.7	1.4e-08	-0.31	0.13	0.05	TRUE
16	ROSMAP	Brain Pre-frontal Cortex	C5orf51	0.03	0.01	bslmm	298	0.02	1.9e-03	-3.6	5.5	3.1e-08	0.12	0.20	0.37	TRUE
19	The Cancer Genome Atlas	Breast Invasive Carcinoma	CCDC152	0.14	0.02	blup	40	0.03	2.5e-06	9.3	-5.5	4.7e-08	-0.38	0.13	0.70	TRUE
8	GTEx	Brain Caudate basal ganglia	C5orf34	0.14	-0.01	enet	14	0.00	3.3e-01	3.5	5.4	5.5e-08	0.07	0.02	0.11	TRUE
25	The Cancer Genome Atlas	Thyroid Carcinoma	MGC42105	0.04	0.01	blup	63	0.01	4.3e-02	-4.1	-5.3	9.7e-08	-0.10	0.00	0.08	TRUE
2	CommonMind	Brain Pre-frontal Cortex	SEPP1	0.06	0.00	blup	330	0.04	1.9e-05	-2.0	-5.3	1.2e-07	-0.35	0.39	0.03	TRUE
10	GTEx	Breast Mammary Tissue (Female)	SEPP1	0.15	0.00	enet	29	0.02	1.0e-01	-2.3	-5.2	1.5e-07	-0.23	0.07	0.07	TRUE
3	GTEx	Adipose Subcutaneous	CCDC152	0.09	0.04	lasso	4	0.02	6.4e-03	10.0	10.0	1.2e-23	0.46	0.74	0.17	FALSE
21	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CCDC152	0.06	0.06	blup	40	0.07	1.6e-08	9.2	-10.0	1.5e-23	-0.43	0.03	0.97	FALSE
14	GTEx	Thyroid	CCDC152	0.10	0.07	lasso	4	0.04	4.2e-04	9.9	9.9	3.3e-23	0.45	0.72	0.14	FALSE
17	ROSMAP	Brain Pre-frontal Cortex	SEPP1	0.18	0.19	lasso	11	0.21	1.3e-26	9.3	-9.9	4.0e-23	-0.48	0.82	0.18	FALSE
6	GTEx	Artery Coronary	CCDC152	0.20	0.13	lasso	2	0.12	7.7e-05	9.9	9.9	4.2e-23	0.46	0.59	0.17	FALSE
22	The Cancer Genome Atlas	Prostate Adenocarcinoma	CCDC152	0.15	0.12	lasso	6	0.12	1.0e-12	9.6	-9.7	4.4e-22	-0.46	0.15	0.85	FALSE
4	GTEx	Adipose Visceral Omentum	CCDC152	0.09	0.06	lasso	9	0.05	1.9e-03	9.9	9.4	7.2e-21	0.45	0.17	0.06	FALSE
24	The Cancer Genome Atlas	Prostate Adenocarcinoma	SEPP1	0.06	0.02	blup	38	0.04	5.2e-05	8.8	-9.3	1.2e-20	-0.40	0.13	0.83	FALSE
5	GTEx	Artery Aorta	CCDC152	0.31	0.24	lasso	8	0.24	2.5e-13	9.9	9.1	1.2e-19	0.45	0.85	0.15	FALSE
7	GTEx	Artery Tibial	CCDC152	0.22	0.17	enet	35	0.18	1.8e-14	9.9	8.0	1.1e-15	0.43	0.85	0.15	FALSE
13	GTEx	Stomach	SERBP1P6	0.12	0.03	enet	16	0.01	6.7e-02	-4.6	7.8	4.4e-15	0.24	0.09	0.09	FALSE
1	CommonMind	Brain Pre-frontal Cortex	GHR	0.25	0.07	bslmm	382	0.13	2.6e-15	-7.3	7.3	3.6e-13	0.20	0.97	0.03	FALSE
15	ROSMAP	Brain Pre-frontal Cortex	CCDC152	0.20	0.09	lasso	10	0.09	5.2e-12	3.0	6.1	1.1e-09	0.17	1.00	0.00	FALSE