[Hub]/) : Traits : Mouth/teeth dental problems: Mouth ulcers :

chr3:158,296,916-161,490,079

Best TWAS P=4.94e-19 · Best GWAS P=7.11e-162 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex IFT80 0.08 0.06 enet 35 0.06 1.5e-07 -5.04 6.4 1.7e-10 0.16 1.00 0.00 TRUE
2 CommonMind Brain Pre-frontal Cortex SCHIP1 0.15 0.12 bslmm 624 0.12 6.9e-14 -4.84 6.1 8.3e-10 0.19 1.00 0.00 TRUE
3 CommonMind Brain Pre-frontal Cortex TRIM59 0.03 0.01 blup 379 0.01 3.1e-02 -4.65 6.2 7.5e-10 0.10 0.60 0.01 TRUE
4 GTEx Brain Cortex IFT80 0.15 0.09 lasso 3 0.04 2.5e-02 7.27 8.9 4.9e-19 0.27 0.27 0.08 TRUE
5 GTEx Brain Frontal Cortex BA9 PPM1L 0.18 0.13 enet 23 0.07 6.5e-03 -4.85 -5.2 1.6e-07 -0.09 0.23 0.28 TRUE
6 GTEx Liver KRT8P12 0.21 0.02 enet 14 0.14 1.2e-04 0.99 6.2 5.6e-10 0.16 0.06 0.18 TRUE
7 GTEx Testis KPNA4 0.14 0.04 enet 21 0.06 1.7e-03 4.34 7.7 1.4e-14 0.19 0.63 0.02 TRUE
8 METSIM Adipose IFT80 0.03 0.00 blup 397 0.01 1.8e-02 7.28 8.4 3.1e-17 0.26 0.11 0.03 FALSE
9 YFS Blood KPNA4 0.02 0.02 lasso 6 0.01 6.7e-05 5.36 5.2 1.9e-07 0.20 0.58 0.03 TRUE
10 The Cancer Genome Atlas Breast Invasive Carcinoma TRIM59 0.01 0.01 blup 41 0.01 7.8e-04 7.27 6.9 5.2e-12 0.19 0.00 0.96 TRUE
11 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma SMC4 0.04 0.03 lasso 3 0.02 9.9e-04 7.20 6.7 1.9e-11 0.23 0.00 0.98 FALSE
12 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma TRIM59 0.05 0.08 lasso 2 0.09 9.4e-11 -5.05 5.3 1.2e-07 0.12 1.00 0.00 FALSE
13 The Cancer Genome Atlas Brain Lower Grade Glioma IFT80 0.03 0.02 blup 94 0.02 3.1e-03 7.20 6.2 6.1e-10 0.15 0.21 0.34 FALSE
14 The Cancer Genome Atlas Brain Lower Grade Glioma IL12A 0.08 0.07 enet 14 0.07 1.1e-08 9.23 8.1 4.5e-16 0.33 1.00 0.00 TRUE
15 The Cancer Genome Atlas Brain Lower Grade Glioma TRIM59 0.04 0.01 blup 41 0.02 7.0e-04 -4.42 5.8 7.2e-09 0.17 0.07 0.75 TRUE
16 The Cancer Genome Atlas Lung Adenocarcinoma TRIM59 0.02 0.01 blup 41 0.01 1.4e-02 5.36 5.5 3.1e-08 0.13 0.05 0.26 FALSE
17 The Cancer Genome Atlas Lung Squamous Cell Carcinoma SMC4 0.04 0.01 blup 43 0.02 1.3e-03 7.27 5.4 8.4e-08 0.14 0.00 0.83 FALSE
18 The Cancer Genome Atlas Thyroid Carcinoma TRIM59 0.02 0.02 blup 41 0.02 8.0e-03 -5.05 5.3 8.7e-08 0.10 0.08 0.19 FALSE