Best TWAS P=7.09e-11 · Best GWAS P=5.6e-14 conditioned to 2.2e-05
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Brain Cerebellum | CEP41 | 0.24 | 0.13 | enet | 20 | 0.13 | 0.00015 | -4.0 | -5.9 | 4.2e-09 | -0.04 | 0.16 | 0.07 | TRUE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | ZC3HC1 | 0.04 | 0.01 | blup | 48 | 0.02 | 0.00814 | -5.6 | -6.5 | 7.1e-11 | -0.59 | 0.02 | 0.19 | TRUE |