[Hub]/) : Traits : Headache pain in last month : ← →

chr12:109,739,011-111,873,167

Best TWAS P=2.45e-10 · Best GWAS P=2.55e-10 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ANAPC7 0.09 0.02 blup 232 0.04 3.3e-06 -3.1 -5.4 5.3e-08 0.48 0.20 0.22 FALSE
2 CommonMind Brain Pre-frontal Cortex ATP2A2 0.03 0.02 lasso 4 0.02 4.9e-03 -5.4 -5.5 4.4e-08 0.89 0.05 0.74 FALSE
3 GTEx Adipose Subcutaneous FAM216A 0.04 0.01 lasso 3 0.00 1.4e-01 -5.9 6.3 2.4e-10 -0.95 0.02 0.84 TRUE
4 GTEx Adipose Visceral Omentum FAM216A 0.09 0.03 lasso 3 0.03 7.6e-03 -5.8 5.8 5.0e-09 -0.98 0.04 0.79 FALSE
5 GTEx Artery Tibial ATP2A2 0.11 0.00 enet 26 0.03 1.4e-03 -5.8 5.6 1.8e-08 -0.54 0.05 0.36 FALSE
6 GTEx Esophagus Muscularis PPTC7 0.10 0.07 enet 10 0.07 2.6e-05 -5.9 -5.8 5.9e-09 0.97 0.02 0.98 FALSE
7 GTEx Skin Not Sun Exposed Suprapubic FAM216A 0.11 0.09 lasso 2 0.06 3.2e-04 -5.5 5.4 5.2e-08 -0.91 0.03 0.94 FALSE
8 GTEx Skin Sun Exposed Lower leg FAM216A 0.03 0.01 lasso 4 0.00 6.5e-01 -5.8 5.6 2.4e-08 -0.96 0.09 0.59 FALSE
9 YFS Blood ANAPC7 0.02 0.01 blup 228 0.01 8.0e-05 -5.7 -5.2 2.7e-07 0.93 0.05 0.95 FALSE
10 YFS Blood ANKRD13A 0.01 0.00 bslmm 297 0.00 1.1e-02 3.1 -5.6 1.7e-08 0.26 0.17 0.02 TRUE
11 YFS Blood HVCN1 0.01 0.01 bslmm 214 0.01 4.0e-03 -4.0 5.1 2.7e-07 -0.90 0.06 0.90 FALSE
12 YFS Blood PPP1CC 0.02 0.02 enet 14 0.02 1.1e-06 -6.2 -5.9 4.5e-09 0.91 0.02 0.98 FALSE
13 The Cancer Genome Atlas Breast Invasive Carcinoma C12orf24 0.02 0.02 lasso 2 0.01 4.8e-04 -5.7 5.7 9.6e-09 -0.97 0.00 1.00 FALSE
14 The Cancer Genome Atlas Prostate Adenocarcinoma VPS29 0.05 0.04 lasso 3 0.05 1.5e-05 -5.7 -5.3 1.5e-07 0.92 0.00 0.99 FALSE