[Hub]/) : Traits : Height :

chr17:36,211,659-39,048,774

Best TWAS P=2.47e-50 · Best GWAS P=2.91e-56 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous PSMB3 0.11 0.01 enet 8 0.03 2.7e-03 -10.69 -7.9 2.9e-15 0.03 0.01 0.95 FALSE
2 GTEx Adipose Subcutaneous PIP4K2B 0.15 0.07 lasso 5 0.07 2.2e-06 -14.71 -14.2 8.9e-46 0.07 0.00 1.00 FALSE
3 GTEx Adipose Subcutaneous MSL1 0.15 0.12 lasso 2 0.12 3.9e-10 12.24 -12.3 1.7e-34 0.29 1.00 0.00 FALSE
4 GTEx Adipose Visceral Omentum PSMB3 0.14 0.01 enet 9 0.03 1.2e-02 -2.49 -6.8 1.2e-11 0.02 0.08 0.49 FALSE
5 GTEx Adipose Visceral Omentum RAPGEFL1 0.50 0.35 enet 18 0.36 1.3e-19 -4.25 -6.1 9.8e-10 0.23 1.00 0.00 TRUE
6 GTEx Adrenal Gland SNORD124 0.22 0.01 lasso 6 0.02 4.8e-02 -8.45 8.9 5.4e-19 -0.54 0.04 0.17 FALSE
7 GTEx Artery Aorta PSMB3 0.23 0.17 enet 26 0.22 2.1e-12 -14.71 -13.1 4.8e-39 0.05 0.00 1.00 TRUE
8 GTEx Artery Aorta PIP4K2B 0.31 0.03 enet 42 0.10 2.6e-06 -0.74 -8.0 1.9e-15 0.05 0.04 0.94 FALSE
9 GTEx Artery Aorta PGAP3 0.13 0.04 lasso 3 0.10 5.3e-06 -5.19 -5.5 3.2e-08 0.05 0.78 0.01 TRUE
10 GTEx Artery Tibial PSMB3 0.10 0.02 enet 12 0.03 1.2e-03 -14.71 -12.3 1.2e-34 0.06 0.00 1.00 TRUE
11 GTEx Artery Tibial PIP4K2B 0.37 0.16 enet 49 0.22 2.1e-17 -14.71 -12.3 6.3e-35 0.04 0.00 1.00 FALSE
12 GTEx Artery Tibial MSL1 0.19 0.14 lasso 2 0.15 4.9e-12 12.24 -12.4 4.3e-35 0.25 1.00 0.00 FALSE
13 GTEx Brain Cortex MED24 0.36 0.03 enet 27 0.09 2.2e-03 -5.62 6.6 3.1e-11 -0.10 0.08 0.07 TRUE
14 GTEx Breast Mammary Tissue RAPGEFL1 0.37 0.22 lasso 5 0.22 2.0e-11 -4.25 -5.6 2.7e-08 0.20 1.00 0.00 FALSE
15 GTEx Breast Mammary Tissue ORMDL3 0.17 0.04 enet 27 0.06 7.2e-04 -3.34 -6.5 8.3e-11 0.22 0.46 0.10 FALSE
16 GTEx Breast Mammary Tissue MSL1 0.20 0.06 lasso 6 0.07 2.2e-04 12.24 -10.8 2.2e-27 0.18 0.40 0.14 FALSE
17 GTEx Breast Mammary Tissue (Female) MSL1 0.09 0.00 enet 9 0.03 5.8e-02 12.24 -10.1 8.9e-24 0.08 0.03 0.08 TRUE
18 GTEx Cells Transformed fibroblasts STARD3 0.08 0.01 enet 18 0.01 3.3e-02 -5.22 -5.4 5.4e-08 0.03 0.32 0.06 TRUE
19 GTEx Colon Transverse MSL1 0.18 0.11 lasso 3 0.05 2.1e-03 12.24 -12.5 9.2e-36 0.28 0.23 0.04 TRUE
20 GTEx Esophagus Mucosa CWC25 0.11 0.07 enet 7 0.05 1.5e-04 -7.89 -8.9 5.3e-19 0.02 0.32 0.55 FALSE
21 GTEx Esophagus Mucosa LINC00672 0.13 0.00 enet 28 0.00 8.3e-01 2.85 7.2 5.9e-13 -0.08 0.05 0.16 FALSE
22 GTEx Esophagus Muscularis FBXL20 0.04 0.03 lasso 3 0.02 1.2e-02 -6.60 5.8 7.9e-09 -0.03 0.35 0.04 FALSE
23 GTEx Esophagus Muscularis MSL1 0.25 0.18 lasso 8 0.22 1.7e-13 12.07 -11.4 3.1e-30 0.22 1.00 0.00 FALSE
24 GTEx Heart Left Ventricle RAPGEFL1 0.38 0.26 lasso 6 0.24 8.1e-13 -4.65 -5.3 1.1e-07 0.16 1.00 0.00 FALSE
25 GTEx Heart Left Ventricle PGAP3 0.17 0.14 lasso 5 0.12 4.3e-07 -5.22 -5.2 2.4e-07 0.03 0.98 0.00 TRUE
26 GTEx Lung RAPGEFL1 0.43 0.08 enet 10 0.19 1.2e-14 -4.65 -5.5 3.5e-08 0.21 1.00 0.00 FALSE
27 GTEx Nerve Tibial MSL1 0.33 0.25 lasso 4 0.24 6.3e-17 12.24 -12.5 7.1e-36 0.27 1.00 0.00 FALSE
28 GTEx Pituitary CWC25 0.30 0.00 enet 18 0.07 7.4e-03 -9.36 -8.4 3.6e-17 0.02 0.08 0.25 FALSE
29 GTEx Pituitary MSL1 0.40 0.27 lasso 7 0.24 1.3e-06 9.93 -11.1 1.1e-28 0.25 0.20 0.22 TRUE
30 GTEx Pituitary RP5-906A24.2 0.34 0.00 lasso 4 0.04 3.0e-02 -1.35 -7.2 4.7e-13 0.16 0.05 0.08 TRUE
31 GTEx Skin Not Sun Exposed Suprapubic MSL1 0.18 0.15 lasso 4 0.15 2.1e-08 12.24 -12.0 6.0e-33 0.30 0.90 0.02 FALSE
32 GTEx Skin Sun Exposed Lower leg MSL1 0.08 0.04 lasso 2 0.05 8.1e-05 9.05 -11.4 4.8e-30 0.19 0.52 0.03 FALSE
33 GTEx Testis PSMB3 0.30 0.24 lasso 4 0.21 8.9e-10 -14.71 -14.8 1.7e-49 0.07 0.00 1.00 FALSE
34 GTEx Testis PIP4K2B 0.22 0.00 enet 19 0.03 1.9e-02 -9.36 8.8 9.3e-19 0.02 0.04 0.39 FALSE
35 GTEx Testis MSL1 0.23 0.05 enet 9 0.15 2.9e-07 12.24 -8.3 8.3e-17 0.28 0.33 0.09 TRUE
36 GTEx Thyroid CWC25 0.12 0.10 lasso 2 0.08 1.2e-06 -6.38 -6.3 3.1e-10 0.02 0.82 0.13 FALSE
37 GTEx Thyroid RAPGEFL1 0.57 0.41 lasso 10 0.41 1.0e-33 -4.65 -5.2 1.8e-07 0.17 1.00 0.00 TRUE
38 GTEx Thyroid THRA 0.06 0.01 lasso 4 0.00 3.5e-01 -6.28 5.6 2.2e-08 -0.05 0.09 0.03 FALSE
39 METSIM Adipose CWC25 0.05 0.02 enet 40 0.03 1.3e-05 -5.41 5.8 7.9e-09 -0.10 0.48 0.06 TRUE
40 METSIM Adipose LINC00672 0.07 0.01 bslmm 351 0.01 9.1e-03 4.47 9.8 1.3e-22 -0.13 0.04 0.54 FALSE
41 METSIM Adipose MSL1 0.12 0.06 lasso 10 0.06 1.8e-09 12.24 -12.2 2.0e-34 0.29 0.99 0.00 FALSE
42 METSIM Adipose PIP4K2B 0.06 0.01 blup 360 0.02 7.0e-04 -5.90 -8.9 4.5e-19 0.06 0.01 0.98 FALSE
43 METSIM Adipose PSMB3 0.04 0.02 lasso 5 0.01 2.3e-03 -12.49 -11.0 3.0e-28 0.01 0.14 0.31 FALSE
44 NTR Blood GSDMA 0.11 0.05 enet 34 0.04 2.8e-14 2.62 5.2 1.8e-07 -0.18 1.00 0.00 TRUE
45 NTR Blood PIP4K2B 0.02 0.01 lasso 3 0.01 6.4e-04 -14.71 14.0 1.4e-44 -0.09 0.00 1.00 FALSE
46 YFS Blood PSMB3 0.14 0.11 enet 31 0.16 7.2e-49 -14.50 -11.4 3.8e-30 0.05 0.00 1.00 FALSE
47 The Cancer Genome Atlas Bladder Urothelial Carcinoma PIP4K2B 0.07 0.01 blup 50 0.04 2.5e-04 -7.21 -6.8 1.3e-11 0.04 0.03 0.18 FALSE
48 The Cancer Genome Atlas Bladder Urothelial Carcinoma PSMB3 0.04 0.00 blup 37 0.02 6.7e-03 -5.90 -10.0 1.7e-23 0.05 0.01 0.63 FALSE
49 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma PIP4K2B 0.04 0.01 blup 56 0.03 6.3e-04 -14.50 -12.0 3.4e-33 0.11 0.00 0.92 FALSE
50 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma STARD3 0.03 0.04 enet 5 0.02 8.2e-04 -5.92 -5.9 4.4e-09 0.04 0.54 0.30 TRUE
51 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma PIP4K2B 0.07 0.01 enet 12 0.02 4.3e-03 -9.36 -10.3 6.1e-25 0.00 0.03 0.29 TRUE
52 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma PSMB3 0.14 0.05 blup 42 0.05 8.9e-07 -14.50 -12.7 4.7e-37 0.06 0.00 1.00 FALSE
53 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma PSMB3 0.12 0.02 enet 14 0.05 1.3e-03 -12.06 -11.1 1.3e-28 0.07 0.00 0.74 FALSE
54 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma RAPGEFL1 0.13 0.02 enet 9 0.06 4.3e-04 9.90 -10.8 2.9e-27 0.38 0.01 0.73 TRUE
55 The Cancer Genome Atlas Brain Lower Grade Glioma IGFBP4 0.04 0.02 blup 38 0.03 5.9e-04 -15.80 -10.5 9.8e-26 0.80 0.00 0.97 TRUE
56 The Cancer Genome Atlas Brain Lower Grade Glioma RAPGEFL1 0.12 0.04 lasso 4 0.06 1.3e-07 -4.61 -5.3 1.1e-07 0.14 0.96 0.00 FALSE
57 The Cancer Genome Atlas Liver Hepatocellular Carcinoma PCGF2 0.11 0.00 blup 37 0.03 1.0e-02 -11.97 5.9 2.9e-09 -0.01 0.01 0.05 FALSE
58 The Cancer Genome Atlas Lung Adenocarcinoma FBXL20 0.04 0.01 blup 72 0.01 7.6e-03 -6.59 6.2 4.4e-10 -0.05 0.01 0.56 FALSE
59 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RPL23 0.10 0.00 enet 19 0.04 2.0e-03 -8.40 -7.6 2.7e-14 0.02 0.01 0.62 FALSE
60 The Cancer Genome Atlas Prostate Adenocarcinoma PIP4K2B 0.05 0.04 blup 56 0.05 5.3e-06 -12.06 -14.0 2.4e-44 0.10 0.00 0.99 FALSE
61 The Cancer Genome Atlas Prostate Adenocarcinoma PSMB3 0.11 0.07 blup 42 0.07 9.4e-08 -14.71 -10.0 9.3e-24 0.06 0.00 1.00 TRUE
62 The Cancer Genome Atlas Rectum Adenocarcinoma CDK12 0.17 0.00 blup 44 0.05 2.5e-02 -4.60 -5.3 1.5e-07 0.01 0.01 0.25 FALSE
63 The Cancer Genome Atlas Soft Tissue Sarcoma PCGF2 0.18 0.05 blup 36 0.11 7.3e-07 -2.50 7.6 2.1e-14 -0.10 0.08 0.84 TRUE
64 The Cancer Genome Atlas Testicular Germ Cell Tumors PSMB3 0.12 0.09 lasso 3 0.06 3.0e-03 -14.50 -14.9 2.5e-50 0.08 0.00 0.93 TRUE
65 The Cancer Genome Atlas Thyroid Carcinoma PSMB3 0.05 0.06 lasso 1 0.05 2.4e-05 -14.71 -14.7 5.7e-49 0.07 0.00 1.00 FALSE