[Hub]/) : Traits : Lung FEV1/FVC ratio :

chr3:56,341,514-58,613,378

Best TWAS P=2.11e-25 · Best GWAS P=5.84e-26 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex DNAH12 0.07 0.07 lasso 3 0.07 2.1e-09 6.79 6.4 1.4e-10 0.56 1.00 0.00 FALSE
2 GTEx Colon Sigmoid RP11-755B10.4 0.20 0.17 lasso 5 0.16 3.3e-06 -3.86 -5.5 4.4e-08 -0.31 0.52 0.18 FALSE
3 GTEx Esophagus Muscularis SLMAP 0.06 0.05 lasso 4 0.05 5.2e-04 10.53 10.4 2.1e-25 0.97 0.02 0.96 TRUE
4 GTEx Muscle Skeletal RP11-755B10.4 0.08 0.03 lasso 6 0.06 2.5e-06 -3.80 -5.5 3.9e-08 -0.40 0.94 0.02 FALSE
5 METSIM Adipose APPL1 0.04 0.00 blup 416 0.02 2.1e-04 -0.81 -5.2 1.9e-07 -0.22 0.08 0.04 FALSE
6 METSIM Adipose DNAH12 0.03 0.03 lasso 3 0.02 1.4e-03 7.19 7.2 6.2e-13 0.67 0.61 0.22 FALSE
7 ROSMAP Brain Pre-frontal Cortex ARF4 0.12 0.15 lasso 7 0.16 1.4e-19 -4.96 -5.7 1.3e-08 -0.32 1.00 0.00 FALSE
8 ROSMAP Brain Pre-frontal Cortex DNAH12 0.04 0.00 blup 448 0.02 1.0e-03 6.51 7.6 2.2e-14 0.42 0.18 0.09 FALSE
9 The Cancer Genome Atlas Breast Invasive Carcinoma ASB14 0.05 0.03 enet 7 0.03 3.7e-07 -4.70 -5.5 3.5e-08 -0.24 0.99 0.00 FALSE
10 The Cancer Genome Atlas Breast Invasive Carcinoma SLMAP 0.01 0.01 blup 86 0.01 9.1e-03 10.42 9.8 1.8e-22 0.96 0.02 0.84 FALSE
11 The Cancer Genome Atlas Esophageal Carcinoma FAM116A 0.13 0.05 lasso 2 0.09 7.7e-04 5.25 5.4 6.8e-08 0.56 0.02 0.18 FALSE
12 The Cancer Genome Atlas Glioblastoma Multiforme CCDC66 0.19 0.02 enet 14 0.12 1.7e-04 -3.55 5.4 6.9e-08 -0.05 0.00 0.24 TRUE
13 The Cancer Genome Atlas Brain Lower Grade Glioma SPATA12 0.04 0.02 blup 70 0.03 4.4e-04 6.37 -5.9 3.1e-09 -0.35 0.01 0.91 FALSE
14 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma PDE12 0.05 0.02 lasso 2 0.02 1.2e-02 7.14 6.2 4.7e-10 0.64 0.01 0.88 FALSE
15 The Cancer Genome Atlas Thyroid Carcinoma PDE12 0.04 0.02 blup 39 0.02 2.7e-03 6.71 6.5 9.1e-11 0.61 0.03 0.87 FALSE