Best TWAS P=5.78e-110 · Best GWAS P=1.32e-111 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | PPP1R13B | 0.04 | 0.02 | enet | 14 | 0.02 | 1.3e-03 | 6.76 | -7.2 | 5.9e-13 | 0.25 | 0.36 | 0.16 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | TRMT61A | 0.06 | 0.03 | lasso | 3 | 0.04 | 6.6e-06 | 10.45 | -17.2 | 1.1e-66 | 0.78 | 0.05 | 0.94 | FALSE |
3 | GTEx | Adipose Subcutaneous | MARK3 | 0.12 | 0.05 | lasso | 3 | 0.06 | 2.5e-05 | -22.38 | -21.0 | 1.4e-97 | 0.95 | 0.01 | 0.99 | FALSE |
4 | GTEx | Adipose Subcutaneous | PPP1R13B | 0.04 | 0.02 | lasso | 2 | 0.01 | 4.1e-02 | 6.03 | -6.8 | 8.4e-12 | 0.25 | 0.25 | 0.11 | FALSE |
5 | GTEx | Adipose Subcutaneous | ZFYVE21 | 0.13 | 0.03 | enet | 25 | 0.04 | 5.0e-04 | 6.29 | 9.8 | 1.3e-22 | -0.41 | 0.59 | 0.15 | FALSE |
6 | GTEx | Adipose Subcutaneous | KLC1 | 0.05 | 0.03 | lasso | 3 | 0.03 | 1.8e-03 | 8.56 | 14.8 | 2.2e-49 | -0.65 | 0.26 | 0.11 | FALSE |
7 | GTEx | Adipose Subcutaneous | XRCC3 | 0.09 | 0.08 | lasso | 5 | 0.07 | 3.8e-06 | 8.35 | 8.9 | 4.4e-19 | -0.36 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Subcutaneous | APOPT1 | 0.06 | 0.02 | lasso | 5 | 0.02 | 8.2e-03 | 8.49 | -10.6 | 4.7e-26 | 0.44 | 0.38 | 0.13 | FALSE |
9 | GTEx | Adipose Subcutaneous | RP11-73M18.8 | 0.14 | 0.19 | lasso | 4 | 0.20 | 6.4e-16 | 8.49 | 5.4 | 8.4e-08 | -0.19 | 1.00 | 0.00 | FALSE |
10 | GTEx | Adipose Subcutaneous | RP11-73M18.6 | 0.08 | 0.05 | lasso | 4 | 0.05 | 3.7e-05 | 7.01 | -7.6 | 2.4e-14 | 0.42 | 0.77 | 0.07 | FALSE |
11 | GTEx | Adipose Visceral Omentum | KLC1 | 0.06 | 0.02 | lasso | 2 | 0.00 | 2.2e-01 | -14.35 | 14.1 | 3.7e-45 | -0.65 | 0.14 | 0.11 | FALSE |
12 | GTEx | Adipose Visceral Omentum | RP11-73M18.8 | 0.16 | 0.07 | lasso | 5 | 0.10 | 1.1e-05 | 7.43 | -8.5 | 1.3e-17 | 0.43 | 0.75 | 0.04 | FALSE |
13 | GTEx | Adrenal Gland | KLC1 | 0.15 | 0.03 | lasso | 3 | 0.06 | 4.6e-03 | 7.92 | 14.7 | 3.9e-49 | -0.65 | 0.05 | 0.67 | FALSE |
14 | GTEx | Adrenal Gland | CKB | 0.18 | 0.00 | enet | 16 | 0.02 | 6.9e-02 | 7.92 | 9.3 | 9.4e-21 | -0.38 | 0.06 | 0.19 | FALSE |
15 | GTEx | Adrenal Gland | RP11-73M18.8 | 0.16 | 0.09 | lasso | 4 | 0.06 | 3.2e-03 | 7.80 | -6.9 | 5.6e-12 | 0.37 | 0.51 | 0.02 | FALSE |
16 | GTEx | Artery Aorta | ZFYVE21 | 0.10 | 0.09 | lasso | 4 | 0.08 | 2.9e-05 | 7.12 | 6.7 | 1.6e-11 | -0.23 | 0.25 | 0.18 | FALSE |
17 | GTEx | Artery Aorta | KLC1 | 0.10 | 0.14 | lasso | 3 | 0.14 | 6.1e-08 | -14.37 | 14.2 | 9.8e-46 | -0.67 | 0.94 | 0.04 | FALSE |
18 | GTEx | Artery Aorta | TRMT61A | 0.14 | 0.07 | lasso | 5 | 0.12 | 6.4e-07 | -21.93 | -19.4 | 8.1e-84 | 0.83 | 0.03 | 0.96 | FALSE |
19 | GTEx | Artery Coronary | APOPT1 | 0.19 | 0.02 | lasso | 5 | 0.05 | 1.2e-02 | 7.04 | -12.7 | 1.0e-36 | 0.54 | 0.10 | 0.06 | FALSE |
20 | GTEx | Artery Tibial | ZFYVE21 | 0.11 | 0.09 | lasso | 1 | 0.08 | 8.0e-07 | -14.39 | 14.4 | 6.1e-47 | -0.69 | 0.96 | 0.02 | FALSE |
21 | GTEx | Artery Tibial | KLC1 | 0.11 | 0.08 | lasso | 3 | 0.08 | 1.1e-06 | -14.35 | 14.7 | 8.6e-49 | -0.69 | 0.88 | 0.02 | FALSE |
22 | GTEx | Artery Tibial | XRCC3 | 0.06 | 0.08 | lasso | 3 | 0.03 | 1.4e-03 | 6.84 | 9.7 | 3.2e-22 | -0.38 | 0.88 | 0.03 | FALSE |
23 | GTEx | Artery Tibial | TDRD9 | 0.15 | 0.06 | enet | 15 | 0.02 | 9.7e-03 | -4.80 | -7.8 | 4.5e-15 | 0.27 | 0.87 | 0.06 | FALSE |
24 | GTEx | Artery Tibial | TRMT61A | 0.07 | 0.07 | lasso | 3 | 0.06 | 2.4e-05 | -21.93 | -21.3 | 1.6e-100 | 0.96 | 0.02 | 0.98 | FALSE |
25 | GTEx | Artery Tibial | RP11-73M18.8 | 0.09 | 0.06 | lasso | 4 | 0.09 | 7.4e-08 | 8.49 | 8.3 | 1.3e-16 | -0.34 | 1.00 | 0.00 | FALSE |
26 | GTEx | Artery Tibial | RP11-73M18.6 | 0.05 | 0.03 | lasso | 2 | 0.02 | 4.7e-03 | 8.49 | 7.7 | 1.5e-14 | -0.30 | 0.26 | 0.03 | FALSE |
27 | GTEx | Brain Caudate basal ganglia | RP11-45P15.4 | 0.37 | 0.17 | lasso | 5 | 0.14 | 8.8e-05 | 4.57 | -5.9 | 3.2e-09 | 0.18 | 0.28 | 0.06 | TRUE |
28 | GTEx | Brain Cortex | XRCC3 | 0.12 | 0.02 | lasso | 4 | 0.01 | 1.7e-01 | 6.24 | 8.1 | 6.2e-16 | -0.30 | 0.18 | 0.06 | FALSE |
29 | GTEx | Brain Frontal Cortex BA9 | APOPT1 | 0.17 | 0.07 | lasso | 3 | 0.08 | 4.6e-03 | 13.49 | -16.3 | 1.6e-59 | 0.69 | 0.15 | 0.24 | FALSE |
30 | GTEx | Brain Nucleus accumbens basal ganglia | TDRD9 | 0.23 | 0.02 | lasso | 3 | 0.05 | 1.5e-02 | 6.26 | -7.5 | 7.1e-14 | 0.29 | 0.09 | 0.10 | FALSE |
31 | GTEx | Brain Nucleus accumbens basal ganglia | RP11-45P15.4 | 0.34 | 0.07 | enet | 22 | 0.24 | 3.6e-07 | 5.41 | -11.2 | 4.4e-29 | 0.49 | 0.18 | 0.57 | TRUE |
32 | GTEx | Brain Putamen basal ganglia | APOPT1 | 0.22 | 0.00 | lasso | 10 | 0.01 | 1.5e-01 | 8.63 | -5.8 | 5.5e-09 | 0.27 | 0.09 | 0.12 | FALSE |
33 | GTEx | Breast Mammary Tissue | MARK3 | 0.12 | 0.11 | lasso | 2 | 0.08 | 3.9e-05 | -22.05 | -22.0 | 1.0e-107 | 0.99 | 0.03 | 0.95 | FALSE |
34 | GTEx | Breast Mammary Tissue | KLC1 | 0.12 | 0.02 | enet | 26 | 0.07 | 2.9e-04 | 6.26 | 11.7 | 2.0e-31 | -0.49 | 0.85 | 0.04 | FALSE |
35 | GTEx | Breast Mammary Tissue | TDRD9 | 0.29 | 0.00 | enet | 32 | 0.11 | 3.1e-06 | 0.81 | -6.5 | 6.4e-11 | 0.16 | 0.07 | 0.10 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | MARK3 | 0.08 | 0.00 | enet | 9 | -0.01 | 7.2e-01 | -22.07 | -20.0 | 3.3e-89 | 0.87 | 0.03 | 0.34 | FALSE |
37 | GTEx | Breast Mammary Tissue (Male) | KLC1 | 0.21 | 0.00 | enet | 74 | 0.04 | 4.9e-02 | 8.78 | 6.1 | 1.1e-09 | -0.24 | 0.14 | 0.09 | FALSE |
38 | GTEx | Breast Mammary Tissue (Male) | RP11-73M18.8 | 0.22 | 0.12 | lasso | 4 | 0.08 | 7.3e-03 | 8.78 | 6.0 | 2.4e-09 | -0.18 | 0.33 | 0.05 | FALSE |
39 | GTEx | Breast Mammary Tissue (Female) | KLC1 | 0.09 | 0.00 | lasso | 2 | 0.00 | 2.4e-01 | 8.56 | 8.4 | 4.6e-17 | -0.35 | 0.09 | 0.09 | FALSE |
40 | GTEx | Cells EBV-transformed lymphocytes | PPP1R13B | 0.15 | 0.08 | lasso | 4 | 0.07 | 2.2e-03 | 6.22 | -6.3 | 2.7e-10 | 0.27 | 0.43 | 0.04 | FALSE |
41 | GTEx | Cells EBV-transformed lymphocytes | BAG5 | 0.16 | 0.22 | enet | 9 | 0.23 | 4.4e-08 | 8.45 | -7.9 | 2.5e-15 | 0.36 | 0.50 | 0.06 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | ZFYVE21 | 0.10 | 0.03 | lasso | 4 | 0.11 | 1.1e-08 | -4.94 | 9.8 | 7.3e-23 | -0.54 | 0.09 | 0.84 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | KLC1 | 0.16 | 0.11 | enet | 17 | 0.10 | 3.1e-08 | 8.49 | 10.8 | 2.6e-27 | -0.46 | 0.98 | 0.02 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | APOPT1 | 0.14 | 0.12 | lasso | 3 | 0.10 | 6.4e-08 | -14.41 | -13.9 | 6.7e-44 | 0.66 | 0.99 | 0.01 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | RP11-45P15.4 | 0.18 | 0.02 | lasso | 3 | 0.08 | 1.2e-06 | -1.60 | -5.3 | 1.1e-07 | 0.12 | 0.14 | 0.03 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | RP11-73M18.8 | 0.17 | 0.08 | enet | 15 | 0.10 | 3.1e-08 | 5.53 | -6.0 | 1.5e-09 | 0.38 | 1.00 | 0.00 | FALSE |
47 | GTEx | Cells Transformed fibroblasts | RP11-73M18.6 | 0.07 | 0.02 | lasso | 5 | 0.00 | 1.3e-01 | 6.14 | -7.3 | 3.6e-13 | 0.39 | 0.13 | 0.12 | FALSE |
48 | GTEx | Colon Transverse | ZFYVE21 | 0.12 | 0.00 | lasso | 4 | 0.00 | 4.7e-01 | 7.88 | 8.7 | 2.3e-18 | -0.28 | 0.08 | 0.49 | FALSE |
49 | GTEx | Colon Transverse | KLC1 | 0.16 | 0.01 | lasso | 7 | 0.00 | 1.9e-01 | 8.57 | 13.6 | 2.7e-42 | -0.61 | 0.08 | 0.47 | FALSE |
50 | GTEx | Colon Transverse | XRCC3 | 0.13 | 0.14 | lasso | 4 | 0.11 | 1.0e-05 | 8.00 | 8.3 | 9.1e-17 | -0.34 | 0.94 | 0.00 | FALSE |
51 | GTEx | Colon Transverse | BAG5 | 0.14 | 0.05 | lasso | 10 | 0.02 | 4.8e-02 | 8.65 | 9.3 | 1.6e-20 | -0.34 | 0.31 | 0.04 | FALSE |
52 | GTEx | Esophagus Gastroesophageal Junction | PPP1R13B | 0.09 | 0.08 | lasso | 2 | 0.05 | 7.9e-03 | 7.12 | -7.2 | 8.9e-13 | 0.25 | 0.27 | 0.11 | FALSE |
53 | GTEx | Esophagus Gastroesophageal Junction | RP11-73M18.8 | 0.14 | 0.07 | enet | 10 | 0.10 | 2.4e-04 | 8.49 | 8.7 | 4.5e-18 | -0.35 | 0.62 | 0.02 | FALSE |
54 | GTEx | Esophagus Mucosa | KLC1 | 0.17 | 0.09 | lasso | 5 | 0.12 | 1.6e-08 | 7.92 | 8.9 | 5.7e-19 | -0.39 | 0.98 | 0.00 | FALSE |
55 | GTEx | Esophagus Mucosa | XRCC3 | 0.12 | 0.15 | lasso | 2 | 0.13 | 4.4e-09 | 7.92 | 7.9 | 2.2e-15 | -0.34 | 1.00 | 0.00 | TRUE |
56 | GTEx | Esophagus Muscularis | PPP1R13B | 0.12 | 0.07 | lasso | 5 | 0.07 | 3.9e-05 | 6.05 | -6.9 | 5.1e-12 | 0.24 | 1.00 | 0.00 | FALSE |
57 | GTEx | Esophagus Muscularis | ZFYVE21 | 0.11 | 0.06 | lasso | 5 | 0.05 | 5.7e-04 | -15.20 | 12.7 | 9.6e-37 | -0.62 | 0.29 | 0.53 | FALSE |
58 | GTEx | Esophagus Muscularis | KLC1 | 0.07 | 0.01 | enet | 10 | 0.02 | 2.6e-02 | -14.41 | 12.4 | 4.3e-35 | -0.55 | 0.14 | 0.35 | FALSE |
59 | GTEx | Lung | MARK3 | 0.06 | 0.02 | lasso | 3 | 0.01 | 6.6e-02 | -22.05 | -21.0 | 4.6e-98 | 0.96 | 0.03 | 0.92 | FALSE |
60 | GTEx | Lung | CKB | 0.07 | 0.01 | lasso | 2 | 0.01 | 3.4e-02 | -14.35 | -19.9 | 8.9e-88 | 0.91 | 0.02 | 0.94 | FALSE |
61 | GTEx | Lung | RP11-73M18.8 | 0.11 | 0.08 | lasso | 2 | 0.05 | 1.0e-04 | 6.14 | -5.9 | 3.1e-09 | 0.32 | 0.70 | 0.08 | FALSE |
62 | GTEx | Muscle Skeletal | ZFYVE21 | 0.10 | 0.05 | lasso | 2 | 0.03 | 3.3e-04 | -14.41 | 14.6 | 1.9e-48 | -0.67 | 0.60 | 0.07 | FALSE |
63 | GTEx | Muscle Skeletal | KLC1 | 0.11 | 0.07 | lasso | 7 | 0.08 | 3.3e-08 | -14.37 | 14.5 | 1.3e-47 | -0.65 | 1.00 | 0.00 | FALSE |
64 | GTEx | Muscle Skeletal | XRCC3 | 0.06 | 0.04 | enet | 13 | 0.03 | 1.3e-03 | 7.88 | 6.2 | 6.4e-10 | -0.21 | 0.74 | 0.01 | FALSE |
65 | GTEx | Muscle Skeletal | APOPT1 | 0.14 | 0.21 | enet | 10 | 0.22 | 6.7e-21 | -15.20 | 16.5 | 3.3e-61 | -0.75 | 1.00 | 0.00 | FALSE |
66 | GTEx | Muscle Skeletal | RP11-73M18.8 | 0.11 | 0.14 | lasso | 7 | 0.13 | 8.4e-13 | 5.91 | 7.8 | 6.2e-15 | -0.33 | 1.00 | 0.00 | FALSE |
67 | GTEx | Nerve Tibial | ZFYVE21 | 0.08 | 0.02 | enet | 12 | 0.03 | 2.8e-03 | -14.35 | 9.2 | 3.8e-20 | -0.49 | 0.09 | 0.32 | FALSE |
68 | GTEx | Nerve Tibial | KLC1 | 0.07 | 0.00 | enet | 22 | 0.01 | 8.5e-02 | 10.88 | 9.6 | 6.8e-22 | -0.42 | 0.23 | 0.29 | FALSE |
69 | GTEx | Nerve Tibial | XRCC3 | 0.08 | 0.06 | lasso | 3 | 0.05 | 3.5e-04 | 8.49 | 8.9 | 7.6e-19 | -0.34 | 0.93 | 0.01 | FALSE |
70 | GTEx | Nerve Tibial | TRMT61A | 0.10 | 0.00 | lasso | 5 | 0.01 | 1.0e-01 | 8.27 | -9.5 | 1.5e-21 | 0.48 | 0.20 | 0.52 | FALSE |
71 | GTEx | Nerve Tibial | APOPT1 | 0.10 | 0.08 | lasso | 5 | 0.06 | 7.8e-05 | 8.63 | -8.6 | 1.1e-17 | 0.36 | 0.78 | 0.04 | FALSE |
72 | GTEx | Nerve Tibial | RP11-73M18.8 | 0.08 | 0.13 | lasso | 4 | 0.10 | 7.4e-08 | 8.49 | 7.1 | 1.5e-12 | -0.27 | 0.99 | 0.00 | FALSE |
73 | GTEx | Ovary | EIF5 | 0.42 | 0.01 | lasso | 7 | 0.10 | 2.2e-03 | -0.46 | -9.4 | 5.8e-21 | 0.40 | 0.08 | 0.10 | FALSE |
74 | GTEx | Pituitary | MARK3 | 0.21 | 0.27 | enet | 8 | 0.25 | 4.9e-07 | -22.07 | -21.7 | 1.0e-104 | 0.98 | 0.04 | 0.94 | FALSE |
75 | GTEx | Pituitary | RP11-73M18.8 | 0.23 | 0.17 | lasso | 2 | 0.13 | 3.6e-04 | 8.49 | 8.4 | 4.6e-17 | -0.33 | 0.15 | 0.05 | FALSE |
76 | GTEx | Prostate | MARK3 | 0.18 | 0.22 | enet | 11 | 0.20 | 8.0e-06 | -22.05 | -21.6 | 9.5e-104 | 0.97 | 0.04 | 0.92 | FALSE |
77 | GTEx | Prostate | TDRD9 | 0.27 | 0.14 | lasso | 10 | 0.13 | 4.8e-04 | -4.97 | -5.8 | 6.2e-09 | 0.20 | 0.10 | 0.09 | FALSE |
78 | GTEx | Prostate | RP11-73M18.8 | 0.15 | 0.29 | lasso | 1 | 0.25 | 5.2e-07 | 7.92 | 7.9 | 2.4e-15 | -0.34 | 0.43 | 0.04 | FALSE |
79 | GTEx | Skin Not Sun Exposed Suprapubic | MARK3 | 0.16 | 0.10 | lasso | 3 | 0.10 | 6.7e-06 | -21.96 | -21.1 | 1.4e-98 | 0.96 | 0.02 | 0.97 | FALSE |
80 | GTEx | Skin Not Sun Exposed Suprapubic | KLC1 | 0.11 | 0.09 | lasso | 4 | 0.10 | 4.1e-06 | 6.29 | 10.4 | 2.4e-25 | -0.36 | 0.71 | 0.07 | FALSE |
81 | GTEx | Skin Not Sun Exposed Suprapubic | XRCC3 | 0.14 | 0.03 | lasso | 14 | 0.03 | 1.3e-02 | 7.92 | 10.9 | 1.9e-27 | -0.42 | 0.73 | 0.08 | FALSE |
82 | GTEx | Skin Not Sun Exposed Suprapubic | CKB | 0.28 | 0.26 | lasso | 4 | 0.25 | 6.4e-14 | -15.00 | -15.3 | 1.1e-52 | 0.71 | 0.98 | 0.02 | FALSE |
83 | GTEx | Skin Sun Exposed Lower leg | MARK3 | 0.10 | 0.09 | enet | 13 | 0.08 | 7.5e-07 | -22.38 | -21.5 | 1.5e-102 | 0.95 | 0.02 | 0.98 | FALSE |
84 | GTEx | Skin Sun Exposed Lower leg | EIF5 | 0.06 | 0.03 | lasso | 4 | 0.07 | 2.9e-06 | 4.07 | -11.8 | 2.5e-32 | 0.53 | 0.25 | 0.39 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | KLC1 | 0.06 | 0.09 | enet | 19 | 0.08 | 2.2e-07 | 8.49 | 11.5 | 8.6e-31 | -0.52 | 0.81 | 0.16 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | XRCC3 | 0.09 | 0.10 | enet | 16 | 0.09 | 6.3e-08 | 8.62 | 8.6 | 8.6e-18 | -0.30 | 1.00 | 0.00 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | TDRD9 | 0.11 | 0.03 | enet | 26 | 0.03 | 1.6e-03 | -4.78 | -6.7 | 1.6e-11 | 0.22 | 0.78 | 0.11 | TRUE |
88 | GTEx | Skin Sun Exposed Lower leg | CKB | 0.43 | 0.32 | enet | 16 | 0.34 | 5.9e-29 | -15.00 | -16.7 | 5.8e-63 | 0.76 | 1.00 | 0.00 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | BAG5 | 0.06 | 0.05 | lasso | 1 | 0.06 | 1.8e-05 | 8.27 | -8.3 | 1.3e-16 | 0.40 | 0.76 | 0.01 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | RP11-45P15.4 | 0.10 | 0.04 | enet | 18 | 0.07 | 1.5e-06 | -1.66 | -5.7 | 1.5e-08 | 0.19 | 0.58 | 0.04 | TRUE |
91 | GTEx | Small Intestine Terminal Ileum | ZFYVE21 | 0.16 | 0.10 | lasso | 2 | 0.13 | 7.7e-04 | 6.87 | 7.5 | 6.4e-14 | -0.27 | 0.11 | 0.08 | FALSE |
92 | GTEx | Spleen | KLC1 | 0.15 | 0.05 | lasso | 3 | 0.03 | 6.4e-02 | 13.49 | 13.0 | 8.0e-39 | -0.53 | 0.09 | 0.15 | FALSE |
93 | GTEx | Stomach | MARK3 | 0.10 | 0.09 | lasso | 2 | 0.04 | 4.5e-03 | -22.07 | -22.3 | 5.8e-110 | 0.98 | 0.03 | 0.90 | TRUE |
94 | GTEx | Stomach | TRMT61A | 0.12 | 0.11 | lasso | 5 | 0.08 | 1.2e-04 | -22.07 | -22.1 | 6.2e-108 | 0.99 | 0.10 | 0.82 | FALSE |
95 | GTEx | Testis | ZFYVE21 | 0.11 | 0.14 | lasso | 2 | 0.11 | 1.4e-05 | -14.41 | 14.4 | 4.5e-47 | -0.69 | 0.41 | 0.35 | FALSE |
96 | GTEx | Testis | KLC1 | 0.17 | 0.17 | lasso | 2 | 0.15 | 4.4e-07 | 7.92 | 8.1 | 4.5e-16 | -0.32 | 0.88 | 0.01 | FALSE |
97 | GTEx | Testis | XRCC3 | 0.17 | 0.10 | enet | 4 | 0.08 | 2.1e-04 | 5.58 | -6.5 | 8.6e-11 | 0.35 | 0.48 | 0.03 | FALSE |
98 | GTEx | Testis | APOPT1 | 0.13 | 0.07 | enet | 21 | 0.12 | 8.4e-06 | 7.03 | 13.9 | 3.8e-44 | -0.67 | 0.22 | 0.66 | FALSE |
99 | GTEx | Testis | RP11-73M18.8 | 0.16 | 0.12 | lasso | 4 | 0.12 | 4.0e-06 | 7.92 | 6.0 | 2.4e-09 | -0.22 | 0.83 | 0.01 | FALSE |
100 | GTEx | Thyroid | MARK3 | 0.38 | 0.48 | lasso | 4 | 0.48 | 2.8e-41 | -22.07 | -22.1 | 5.8e-108 | 0.99 | 0.87 | 0.13 | FALSE |
101 | GTEx | Thyroid | PPP1R13B | 0.08 | 0.06 | enet | 17 | 0.04 | 2.8e-04 | 6.84 | 5.6 | 2.5e-08 | -0.17 | 0.85 | 0.01 | FALSE |
102 | GTEx | Thyroid | KLC1 | 0.12 | 0.03 | enet | 22 | 0.03 | 3.6e-03 | 7.96 | 11.1 | 1.7e-28 | -0.47 | 0.40 | 0.14 | FALSE |
103 | GTEx | Thyroid | XRCC3 | 0.12 | 0.07 | lasso | 6 | 0.05 | 1.3e-04 | 6.14 | -5.4 | 7.8e-08 | 0.29 | 0.53 | 0.02 | FALSE |
104 | GTEx | Thyroid | TRMT61A | 0.11 | 0.03 | lasso | 4 | 0.02 | 1.2e-02 | 9.41 | -8.0 | 1.2e-15 | 0.42 | 0.56 | 0.08 | FALSE |
105 | GTEx | Thyroid | APOPT1 | 0.11 | 0.12 | lasso | 1 | 0.10 | 1.9e-08 | 8.35 | -8.3 | 6.9e-17 | 0.36 | 1.00 | 0.00 | FALSE |
106 | GTEx | Whole Blood | KLC1 | 0.16 | 0.13 | lasso | 3 | 0.11 | 3.6e-10 | 7.92 | 7.4 | 1.0e-13 | -0.31 | 1.00 | 0.00 | FALSE |
107 | GTEx | Whole Blood | XRCC3 | 0.08 | 0.12 | lasso | 3 | 0.10 | 1.3e-09 | 7.92 | 7.3 | 3.3e-13 | -0.30 | 1.00 | 0.00 | FALSE |
108 | METSIM | Adipose | BAG5 | 0.06 | 0.07 | lasso | 3 | 0.07 | 4.5e-10 | 8.45 | -9.0 | 2.5e-19 | 0.43 | 1.00 | 0.00 | FALSE |
109 | METSIM | Adipose | KLC1 | 0.06 | 0.04 | enet | 22 | 0.04 | 7.7e-07 | 8.49 | 5.8 | 4.9e-09 | -0.24 | 0.97 | 0.01 | FALSE |
110 | METSIM | Adipose | MARK3 | 0.03 | 0.02 | lasso | 6 | 0.03 | 6.3e-05 | 8.36 | -14.3 | 1.6e-46 | 0.63 | 0.77 | 0.20 | FALSE |
111 | METSIM | Adipose | TDRD9 | 0.08 | 0.04 | lasso | 10 | 0.06 | 1.9e-09 | 8.63 | -11.9 | 1.5e-32 | 0.43 | 0.58 | 0.41 | FALSE |
112 | NTR | Blood | BAG5 | 0.02 | 0.00 | lasso | 5 | 0.01 | 6.3e-03 | -15.20 | 16.2 | 1.1e-58 | -0.74 | 0.24 | 0.49 | FALSE |
113 | NTR | Blood | KLC1 | 0.04 | 0.02 | blup | 393 | 0.04 | 8.2e-12 | 7.92 | 7.1 | 1.7e-12 | -0.26 | 1.00 | 0.00 | FALSE |
114 | YFS | Blood | KLC1 | 0.01 | 0.01 | blup | 389 | 0.01 | 1.0e-03 | -15.40 | 16.7 | 1.5e-62 | -0.76 | 0.13 | 0.65 | FALSE |
115 | YFS | Blood | MARK3 | 0.04 | 0.04 | lasso | 3 | 0.04 | 1.6e-12 | 8.11 | 8.1 | 4.4e-16 | -0.46 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Breast Invasive Carcinoma | BAG5 | 0.01 | 0.02 | lasso | 3 | 0.01 | 7.6e-04 | 7.21 | -10.9 | 1.2e-27 | 0.53 | 0.09 | 0.60 | FALSE |
117 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C14orf153 | 0.05 | 0.02 | lasso | 4 | 0.02 | 8.0e-05 | -15.20 | -16.2 | 2.8e-59 | 0.75 | 0.12 | 0.82 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CKB | 0.06 | 0.03 | lasso | 3 | 0.03 | 2.5e-06 | -14.93 | -15.1 | 2.7e-51 | 0.71 | 0.40 | 0.51 | FALSE |
119 | The Cancer Genome Atlas | Colon Adenocarcinoma | C14orf153 | 0.07 | 0.05 | lasso | 4 | 0.04 | 1.5e-03 | -16.36 | -15.8 | 2.8e-56 | 0.71 | 0.04 | 0.46 | FALSE |
120 | The Cancer Genome Atlas | Colon Adenocarcinoma | TDRD9 | 0.11 | 0.06 | enet | 9 | 0.06 | 3.3e-04 | -4.78 | -5.6 | 2.5e-08 | 0.15 | 0.09 | 0.32 | FALSE |
121 | The Cancer Genome Atlas | Glioblastoma Multiforme | C14orf153 | 0.14 | 0.01 | blup | 40 | 0.03 | 3.5e-02 | -15.20 | -18.1 | 1.9e-73 | 0.83 | 0.01 | 0.52 | FALSE |
122 | The Cancer Genome Atlas | Glioblastoma Multiforme | MARK3 | 0.12 | 0.05 | blup | 64 | 0.07 | 3.3e-03 | -21.96 | -21.9 | 4.9e-106 | 0.95 | 0.01 | 0.66 | FALSE |
123 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | BAG5 | 0.06 | 0.02 | blup | 30 | 0.03 | 1.4e-04 | 6.54 | -15.5 | 2.8e-54 | 0.71 | 0.02 | 0.94 | FALSE |
124 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MARK3 | 0.07 | 0.03 | blup | 64 | 0.06 | 5.5e-07 | -15.00 | -18.0 | 8.3e-73 | 0.81 | 0.02 | 0.98 | FALSE |
125 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | XRCC3 | 0.03 | 0.04 | enet | 3 | 0.04 | 6.1e-05 | 7.92 | 8.0 | 1.1e-15 | -0.33 | 0.70 | 0.10 | FALSE |
126 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | XRCC3 | 0.06 | 0.07 | lasso | 4 | 0.05 | 4.6e-04 | 8.00 | 5.8 | 5.8e-09 | -0.23 | 0.10 | 0.04 | FALSE |
127 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C14orf153 | 0.04 | 0.01 | blup | 38 | 0.03 | 6.2e-04 | 8.56 | -15.3 | 1.1e-52 | 0.67 | 0.10 | 0.14 | TRUE |
128 | The Cancer Genome Atlas | Lung Adenocarcinoma | C14orf153 | 0.06 | 0.02 | blup | 38 | 0.04 | 2.4e-05 | -15.20 | -16.6 | 8.5e-62 | 0.73 | 0.05 | 0.82 | FALSE |
129 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | BAG5 | 0.03 | 0.03 | lasso | 1 | 0.02 | 9.5e-04 | 7.80 | -7.8 | 6.3e-15 | 0.42 | 0.14 | 0.19 | FALSE |
130 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C14orf153 | 0.05 | 0.05 | blup | 40 | 0.04 | 8.6e-06 | -16.32 | -17.0 | 3.9e-65 | 0.78 | 0.37 | 0.55 | FALSE |
131 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CKB | 0.03 | 0.00 | blup | 34 | 0.02 | 1.4e-03 | 8.36 | -18.1 | 1.4e-73 | 0.79 | 0.02 | 0.64 | FALSE |
132 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TRMT61A | 0.02 | 0.00 | blup | 34 | 0.01 | 6.2e-02 | 8.45 | -17.4 | 7.0e-68 | 0.80 | 0.01 | 0.74 | FALSE |
133 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | C14orf153 | 0.15 | 0.03 | blup | 37 | 0.03 | 1.6e-02 | 8.49 | -8.8 | 1.6e-18 | 0.38 | 0.03 | 0.12 | FALSE |
134 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | BAG5 | 0.08 | 0.09 | lasso | 2 | 0.08 | 3.7e-04 | -22.07 | -22.0 | 1.4e-107 | 0.98 | 0.00 | 0.97 | FALSE |
135 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | C14orf153 | 0.11 | 0.11 | lasso | 3 | 0.10 | 1.1e-04 | -16.36 | -16.3 | 2.1e-59 | 0.72 | 0.06 | 0.72 | FALSE |
136 | The Cancer Genome Atlas | Prostate Adenocarcinoma | BAG5 | 0.04 | 0.05 | lasso | 2 | 0.04 | 9.1e-05 | 8.45 | -8.4 | 2.8e-17 | 0.40 | 0.78 | 0.02 | FALSE |
137 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C14orf153 | 0.09 | 0.08 | blup | 38 | 0.09 | 6.2e-10 | -16.36 | -18.4 | 1.3e-75 | 0.82 | 0.04 | 0.96 | FALSE |
138 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CKB | 0.07 | 0.09 | blup | 32 | 0.10 | 1.1e-10 | 13.49 | -15.1 | 1.0e-51 | 0.63 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MARK3 | 0.07 | 0.06 | enet | 7 | 0.08 | 1.0e-08 | -14.93 | -19.2 | 3.1e-82 | 0.88 | 0.03 | 0.97 | FALSE |
140 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TRMT61A | 0.03 | 0.01 | blup | 32 | 0.01 | 1.4e-02 | -21.93 | -18.7 | 7.0e-78 | 0.84 | 0.01 | 0.62 | FALSE |
141 | The Cancer Genome Atlas | Prostate Adenocarcinoma | XRCC3 | 0.02 | 0.01 | blup | 46 | 0.01 | 3.0e-02 | 5.67 | 5.4 | 5.7e-08 | -0.18 | 0.06 | 0.06 | FALSE |
142 | The Cancer Genome Atlas | Rectum Adenocarcinoma | BAG5 | 0.17 | -0.01 | blup | 32 | 0.02 | 1.3e-01 | 10.45 | -15.8 | 1.5e-56 | 0.76 | 0.01 | 0.44 | FALSE |
143 | The Cancer Genome Atlas | Soft Tissue Sarcoma | TDRD9 | 0.10 | 0.02 | blup | 74 | 0.02 | 3.9e-02 | -4.80 | -5.5 | 5.0e-08 | 0.15 | 0.05 | 0.13 | FALSE |
144 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | ZFYVE21 | 0.34 | -0.01 | lasso | 7 | 0.07 | 8.0e-03 | 7.02 | 5.3 | 9.0e-08 | -0.35 | 0.01 | 0.19 | FALSE |
145 | The Cancer Genome Atlas | Stomach Adenocarcinoma | BAG5 | 0.18 | 0.04 | blup | 30 | 0.05 | 1.4e-04 | 8.27 | -10.4 | 2.3e-25 | 0.44 | 0.06 | 0.11 | FALSE |
146 | The Cancer Genome Atlas | Stomach Adenocarcinoma | C14orf153 | 0.20 | 0.05 | lasso | 2 | 0.04 | 8.8e-04 | 13.49 | -16.2 | 3.9e-59 | 0.67 | 0.02 | 0.69 | FALSE |
147 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | C14orf153 | 0.20 | 0.07 | blup | 38 | 0.07 | 1.5e-03 | 6.54 | -11.4 | 2.6e-30 | 0.56 | 0.02 | 0.09 | FALSE |
148 | The Cancer Genome Atlas | Thyroid Carcinoma | KLC1 | 0.04 | 0.01 | blup | 82 | 0.03 | 5.4e-04 | 8.63 | 12.5 | 7.6e-36 | -0.52 | 0.14 | 0.10 | FALSE |
149 | The Cancer Genome Atlas | Thyroid Carcinoma | MARK3 | 0.10 | 0.03 | blup | 61 | 0.03 | 4.0e-04 | -15.00 | -14.0 | 1.2e-44 | 0.68 | 0.01 | 0.59 | TRUE |
150 | The Cancer Genome Atlas | Thyroid Carcinoma | PPP1R13B | 0.04 | 0.04 | lasso | 2 | 0.03 | 7.9e-04 | 8.70 | 8.5 | 1.4e-17 | -0.29 | 0.35 | 0.04 | FALSE |