[Hub]/) : Traits : Blood Red Count :

chr10:89,997,495-92,230,837

Best TWAS P=4.17e-15 · Best GWAS P=2.81e-12 conditioned to 0.422

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex FAS 0.57 0.54 enet 20 0.59 4.8e-89 6.9 6.8 1.2e-11 -0.02 0.00 1.00 FALSE
2 CommonMind Brain Pre-frontal Cortex FLJ37201 0.19 0.14 lasso 3 0.14 8.4e-17 -6.9 6.9 4.7e-12 -0.92 0.00 1.00 FALSE
3 GTEx Adipose Subcutaneous FAS 0.34 0.16 enet 22 0.25 1.1e-20 -5.9 -6.5 6.4e-11 0.05 0.03 0.97 FALSE
4 GTEx Artery Tibial KIF20B 0.05 0.02 enet 8 0.02 7.0e-03 5.5 -6.6 4.5e-11 0.16 0.16 0.63 FALSE
5 GTEx Brain Caudate basal ganglia FAS 0.72 0.47 enet 9 0.40 9.9e-13 -5.9 6.8 1.1e-11 -0.01 0.01 0.99 FALSE
6 GTEx Brain Cortex FAS 0.45 0.25 lasso 5 0.25 1.3e-07 6.9 5.7 9.4e-09 -0.01 0.00 1.00 FALSE
7 GTEx Brain Hippocampus FAS 0.72 0.29 enet 45 0.34 1.0e-08 6.9 6.6 3.7e-11 -0.01 0.00 0.98 FALSE
8 GTEx Brain Nucleus accumbens basal ganglia FAS 0.38 0.20 enet 36 0.24 3.4e-07 -5.9 6.8 1.1e-11 -0.03 0.01 0.98 FALSE
9 GTEx Brain Putamen basal ganglia RP11-399O19.9 0.40 0.17 lasso 3 0.20 2.2e-05 6.9 6.0 2.3e-09 0.00 0.01 0.98 FALSE
10 GTEx Breast Mammary Tissue (Female) FAS 0.25 0.19 lasso 6 0.15 3.3e-05 6.3 -6.5 9.1e-11 0.03 0.01 0.98 FALSE
11 GTEx Esophagus Muscularis FAS 0.20 0.06 enet 31 0.05 5.0e-04 6.3 -5.4 5.9e-08 0.02 0.00 0.99 FALSE
12 GTEx Muscle Skeletal FAS 0.20 0.07 lasso 10 0.07 1.1e-07 -5.9 -6.2 6.5e-10 0.02 0.01 0.99 FALSE
13 GTEx Nerve Tibial FAS 0.24 0.14 lasso 5 0.18 1.7e-12 6.9 -6.8 1.1e-11 0.02 0.00 1.00 FALSE
14 GTEx Skin Sun Exposed Lower leg FAS 0.12 0.01 lasso 7 0.02 3.8e-03 -3.8 -5.2 2.1e-07 0.00 0.01 0.99 FALSE
15 GTEx Testis KIF20B 0.13 0.10 lasso 5 0.09 5.9e-05 5.8 -5.9 3.8e-09 0.30 0.70 0.18 FALSE
16 GTEx Testis PANK1 0.24 0.12 lasso 4 0.07 7.6e-04 5.6 5.7 9.9e-09 -0.33 0.25 0.30 FALSE
17 METSIM Adipose FAS 0.28 0.21 enet 13 0.28 3.9e-42 6.9 -5.9 4.5e-09 0.02 0.00 1.00 FALSE
18 NTR Blood ACTA2 0.04 0.04 lasso 3 0.04 4.9e-12 6.9 -6.9 4.6e-12 0.02 0.00 1.00 FALSE
19 NTR Blood FAS 0.04 0.03 enet 20 0.03 7.9e-10 6.9 -6.2 5.0e-10 0.01 0.00 1.00 FALSE
20 ROSMAP Brain Pre-frontal Cortex FAS 0.47 0.42 enet 30 0.48 2.5e-70 6.9 6.2 4.0e-10 -0.01 0.00 1.00 FALSE
21 YFS Blood ACTA2 0.71 0.69 enet 55 0.72 0.0e+00 6.9 -7.0 2.2e-12 0.03 0.00 1.00 TRUE
22 YFS Blood FAS 0.14 0.07 bslmm 548 0.10 5.5e-32 -5.9 -6.6 3.7e-11 0.05 0.03 0.97 FALSE
23 The Cancer Genome Atlas Bladder Urothelial Carcinoma FLJ37201 0.08 0.04 blup 41 0.06 1.8e-05 -3.9 5.5 3.0e-08 -0.66 0.18 0.81 FALSE
24 The Cancer Genome Atlas Breast Invasive Carcinoma FLJ37201 0.19 0.11 enet 9 0.10 6.2e-20 -6.9 6.7 2.7e-11 -0.90 0.00 1.00 FALSE
25 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma FLJ37201 0.09 0.09 enet 5 0.07 1.7e-04 -3.9 5.9 4.1e-09 -0.66 0.05 0.82 FALSE
26 The Cancer Genome Atlas Colon Adenocarcinoma KIF20B 0.16 0.09 blup 75 0.11 9.5e-07 -3.9 -5.8 4.8e-09 0.58 0.39 0.56 FALSE
27 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma FLJ37201 0.04 0.02 enet 15 0.01 2.1e-02 -3.9 5.8 7.6e-09 -0.72 0.02 0.84 FALSE
28 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma KIF20B 0.05 0.03 lasso 5 0.02 7.4e-04 -6.9 -5.7 1.3e-08 0.85 0.00 0.98 FALSE
29 The Cancer Genome Atlas Brain Lower Grade Glioma FAS 0.03 0.03 enet 3 0.03 6.1e-04 4.2 5.7 1.2e-08 -0.01 0.01 0.98 FALSE
30 The Cancer Genome Atlas Lung Adenocarcinoma FAS 0.03 0.00 blup 87 0.01 3.0e-02 -2.0 -5.5 4.7e-08 0.09 0.01 0.31 FALSE
31 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma FLJ37201 0.14 0.08 lasso 2 0.08 3.9e-06 -6.9 6.9 6.7e-12 -0.90 0.00 1.00 FALSE
32 The Cancer Genome Atlas Prostate Adenocarcinoma FAS 0.05 0.01 blup 87 0.02 1.6e-03 5.8 5.5 3.1e-08 -0.06 0.01 0.98 FALSE
33 The Cancer Genome Atlas Prostate Adenocarcinoma KIF20B 0.03 0.02 blup 75 0.01 1.0e-02 5.3 -5.2 2.3e-07 0.20 0.13 0.10 FALSE
34 The Cancer Genome Atlas Prostate Adenocarcinoma PANK1 0.05 0.02 blup 83 0.03 8.9e-04 -2.9 -6.2 6.6e-10 0.68 0.02 0.81 FALSE
35 The Cancer Genome Atlas Rectum Adenocarcinoma PANK1 0.18 0.05 blup 83 0.10 2.1e-03 -6.8 -5.2 1.8e-07 0.74 0.01 0.64 FALSE
36 The Cancer Genome Atlas Testicular Germ Cell Tumors FLJ37201 0.21 0.06 enet 4 0.08 1.0e-03 -6.9 7.8 4.2e-15 -0.81 0.00 0.81 TRUE
37 The Cancer Genome Atlas Thyroid Carcinoma KIF20B 0.05 0.02 enet 6 0.03 1.0e-03 -6.9 -7.6 2.5e-14 0.79 0.00 0.96 FALSE
38 The Cancer Genome Atlas Thyroid Carcinoma PANK1 0.04 0.05 lasso 2 0.03 2.6e-04 -6.9 -6.9 6.4e-12 0.90 0.00 0.98 FALSE