[Hub]/) : Traits : Mean time to correctly identify matches : ← →

chr5:111,499,732-112,950,045

Best TWAS P=1.16e-10 · Best GWAS P=1.97e-10 conditioned to 0.0892

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	SRP19	0.08	0.06	lasso	5	0.07	1.3e-08	5.0	-5.4	6.6e-08	-0.70	0.34	0.66	FALSE
2	GTEx	Adipose Visceral Omentum	REEP5	0.09	0.05	lasso	5	0.02	4.9e-02	5.8	5.6	2.2e-08	0.69	0.10	0.75	FALSE
3	GTEx	Artery Aorta	REEP5	0.17	0.07	lasso	13	0.10	4.2e-06	6.2	6.4	1.2e-10	0.85	0.05	0.95	TRUE
4	GTEx	Artery Tibial	REEP5	0.17	0.12	lasso	5	0.13	3.0e-10	5.5	5.1	2.7e-07	0.63	0.63	0.37	FALSE
5	GTEx	Cells Transformed fibroblasts	CTC-487M23.5	0.07	0.03	lasso	3	0.03	2.9e-03	-6.1	-6.0	1.5e-09	-0.82	0.04	0.88	FALSE
6	GTEx	Colon Transverse	REEP5	0.12	0.14	lasso	2	0.14	4.4e-07	5.7	5.7	1.2e-08	0.72	0.26	0.73	FALSE
7	GTEx	Esophagus Gastroesophageal Junction	REEP5	0.18	0.03	lasso	3	0.03	3.7e-02	5.5	5.5	4.4e-08	0.81	0.04	0.88	FALSE
8	GTEx	Esophagus Mucosa	REEP5	0.19	0.10	lasso	5	0.09	1.5e-06	5.5	5.3	1.3e-07	0.75	0.15	0.80	FALSE
9	GTEx	Esophagus Muscularis	REEP5	0.18	0.09	lasso	4	0.14	5.9e-09	5.7	5.7	1.2e-08	0.75	0.27	0.73	FALSE
10	GTEx	Nerve Tibial	REEP5	0.16	0.13	lasso	3	0.10	9.2e-08	5.5	5.3	9.9e-08	0.64	0.60	0.40	FALSE
11	GTEx	Nerve Tibial	XBP1P1	0.06	0.05	lasso	2	0.04	6.1e-04	4.9	5.7	1.2e-08	0.87	0.06	0.88	FALSE
12	GTEx	Skin Not Sun Exposed Suprapubic	CTC-487M23.5	0.10	0.06	lasso	3	0.05	6.7e-04	5.6	5.9	3.7e-09	0.73	0.12	0.69	FALSE
13	GTEx	Skin Not Sun Exposed Suprapubic	CTC-487M23.7	0.08	0.09	enet	7	0.10	3.9e-06	5.6	6.0	1.7e-09	0.80	0.14	0.82	FALSE
14	GTEx	Skin Sun Exposed Lower leg	REEP5	0.08	0.05	lasso	4	0.03	1.9e-03	4.7	5.2	2.5e-07	0.69	0.33	0.64	FALSE
15	GTEx	Skin Sun Exposed Lower leg	CTC-487M23.5	0.17	0.07	lasso	6	0.06	7.7e-06	5.6	5.8	6.2e-09	0.69	0.30	0.70	FALSE
16	GTEx	Skin Sun Exposed Lower leg	CTC-487M23.7	0.06	0.07	lasso	1	0.04	2.4e-04	5.6	5.6	1.9e-08	0.64	0.14	0.82	FALSE
17	GTEx	Testis	REEP5	0.22	0.14	lasso	5	0.14	6.6e-07	5.7	6.0	1.7e-09	0.75	0.13	0.86	FALSE
18	NTR	Blood	REEP5	0.03	0.04	lasso	9	0.04	3.3e-12	6.2	6.3	2.7e-10	0.81	0.03	0.97	FALSE
19	The Cancer Genome Atlas	Brain Lower Grade Glioma	SRP19	0.05	0.04	lasso	3	0.04	3.7e-05	5.6	-5.6	2.8e-08	-0.69	0.15	0.83	FALSE
20	The Cancer Genome Atlas	Prostate Adenocarcinoma	SRP19	0.05	0.05	lasso	1	0.05	4.5e-06	5.5	-5.5	3.4e-08	-0.77	0.23	0.71	FALSE
21	The Cancer Genome Atlas	Soft Tissue Sarcoma	SRP19	0.07	0.03	lasso	4	0.02	2.4e-02	5.5	-5.5	4.8e-08	-0.77	0.05	0.33	FALSE
22	The Cancer Genome Atlas	Stomach Adenocarcinoma	REEP5	0.03	0.02	blup	47	0.03	4.1e-03	4.7	5.8	6.9e-09	0.75	0.04	0.40	FALSE
23	The Cancer Genome Atlas	Thyroid Carcinoma	APC	0.02	0.02	enet	5	0.02	4.2e-03	-6.2	6.4	1.7e-10	0.91	0.03	0.87	FALSE