[Hub]/) : Traits : Forced expiratory volume in 1-second (FEV1), Best measure :

chr1:25,475,418-27,595,862

Best TWAS P=3.97e-12 · Best GWAS P=3.45e-12 conditioned to 0.264

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Cells Transformed fibroblasts DHDDS 0.13 0.09 lasso 4 0.08 1.0e-06 5.0 -5.2 1.8e-07 -0.25 0.98 0.00 FALSE
2 GTEx Esophagus Mucosa DHDDS 0.11 0.06 lasso 4 0.04 6.6e-04 -6.2 -6.9 4.2e-12 -0.25 0.30 0.48 TRUE
3 GTEx Esophagus Mucosa PDIK1L 0.10 0.09 lasso 6 0.09 8.8e-07 6.3 -6.4 1.4e-10 -0.83 0.03 0.97 FALSE
4 GTEx Nerve Tibial PDIK1L 0.09 0.01 enet 10 0.03 2.2e-03 6.4 -6.4 1.7e-10 -0.63 0.09 0.88 FALSE
5 GTEx Pancreas CNKSR1 0.20 0.03 enet 20 0.04 7.3e-03 6.3 -5.7 1.5e-08 -0.48 0.09 0.32 FALSE
6 GTEx Pituitary CNKSR1 0.38 0.16 lasso 7 0.15 1.4e-04 5.3 -6.1 8.3e-10 -0.67 0.17 0.51 FALSE
7 GTEx Skin Not Sun Exposed Suprapubic CNKSR1 0.15 0.10 lasso 7 0.09 1.0e-05 5.3 -6.3 3.3e-10 -0.65 0.40 0.58 FALSE
8 GTEx Skin Not Sun Exposed Suprapubic PDIK1L 0.22 0.05 enet 37 0.11 8.3e-07 6.3 -5.8 7.9e-09 -0.74 0.07 0.93 FALSE
9 GTEx Skin Sun Exposed Lower leg PDIK1L 0.14 0.05 enet 23 0.12 3.1e-10 6.3 -5.9 4.4e-09 -0.71 0.10 0.90 FALSE
10 GTEx Thyroid CNKSR1 0.10 0.04 lasso 7 0.03 2.1e-03 6.2 -6.6 3.8e-11 -0.57 0.06 0.92 FALSE
11 GTEx Thyroid SEPN1 0.10 0.03 lasso 3 0.04 7.0e-04 -3.7 -5.5 4.1e-08 -0.32 0.86 0.04 FALSE
12 METSIM Adipose RPS6KA1 0.04 0.01 bslmm 367 0.03 3.9e-05 5.2 5.1 2.7e-07 0.46 0.80 0.06 FALSE
13 The Cancer Genome Atlas Bladder Urothelial Carcinoma TRIM63 0.03 0.02 blup 33 0.02 4.6e-03 6.4 6.9 4.0e-12 0.86 0.02 0.69 FALSE
14 The Cancer Genome Atlas Breast Invasive Carcinoma PDIK1L 0.02 0.01 blup 37 0.02 6.1e-05 6.3 -5.4 5.9e-08 -0.72 0.02 0.94 FALSE
15 The Cancer Genome Atlas Breast Invasive Carcinoma TRIM63 0.15 0.16 lasso 2 0.16 2.3e-32 6.4 6.4 1.8e-10 0.80 0.06 0.94 FALSE
16 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma TRIM63 0.14 0.15 lasso 1 0.14 2.2e-07 6.3 6.3 2.7e-10 0.80 0.05 0.94 FALSE
17 The Cancer Genome Atlas Colon Adenocarcinoma TRIM63 0.08 0.10 lasso 4 0.10 3.7e-06 6.4 6.8 1.5e-11 0.89 0.01 0.99 FALSE
18 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma PDIK1L 0.02 0.02 blup 37 0.02 2.8e-03 6.3 -6.2 4.8e-10 -0.74 0.01 0.83 FALSE
19 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma SLC30A2 0.03 0.02 lasso 3 0.01 1.1e-02 5.3 -6.4 2.1e-10 -0.79 0.01 0.93 FALSE
20 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma TRIM63 0.11 0.11 enet 4 0.12 9.0e-14 6.4 5.7 9.6e-09 0.79 0.06 0.94 FALSE
21 The Cancer Genome Atlas Brain Lower Grade Glioma PDIK1L 0.03 0.01 blup 37 0.02 2.6e-03 6.1 -5.7 1.2e-08 -0.64 0.01 0.54 FALSE
22 The Cancer Genome Atlas Brain Lower Grade Glioma TRIM63 0.29 0.33 enet 20 0.33 2.5e-38 6.4 6.9 4.0e-12 0.83 0.06 0.94 TRUE
23 The Cancer Genome Atlas Lung Adenocarcinoma TRIM63 0.14 0.20 enet 7 0.21 9.4e-24 6.3 6.7 2.6e-11 0.90 0.06 0.94 FALSE
24 The Cancer Genome Atlas Lung Squamous Cell Carcinoma PDIK1L 0.02 0.00 blup 37 0.02 1.2e-03 2.8 -6.0 1.5e-09 -0.79 0.02 0.73 FALSE
25 The Cancer Genome Atlas Lung Squamous Cell Carcinoma TRIM63 0.16 0.11 lasso 1 0.10 2.0e-11 6.4 6.4 2.1e-10 0.80 0.06 0.94 FALSE
26 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TRIM63 0.14 0.18 lasso 7 0.15 3.0e-10 6.3 6.4 1.4e-10 0.86 0.02 0.98 FALSE
27 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma RPS6KA1 0.11 0.05 lasso 6 0.07 8.0e-04 -5.8 6.6 5.6e-11 0.14 0.01 0.87 FALSE
28 The Cancer Genome Atlas Prostate Adenocarcinoma PDIK1L 0.03 0.03 blup 37 0.02 7.0e-03 -2.6 -5.1 2.6e-07 -0.67 0.03 0.26 FALSE
29 The Cancer Genome Atlas Prostate Adenocarcinoma SH3BGRL3 0.05 0.03 lasso 2 0.03 9.3e-04 5.4 6.1 7.9e-10 0.45 0.00 0.94 FALSE
30 The Cancer Genome Atlas Rectum Adenocarcinoma TRIM63 0.28 0.22 lasso 3 0.20 1.7e-05 5.3 6.1 9.2e-10 0.74 0.03 0.84 FALSE
31 The Cancer Genome Atlas Thyroid Carcinoma TRIM63 0.18 0.26 enet 7 0.26 3.0e-25 6.3 6.6 4.5e-11 0.84 0.07 0.93 FALSE
32 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma TRIM63 0.19 0.07 blup 33 0.14 1.3e-04 6.4 6.3 2.7e-10 0.84 0.01 0.98 FALSE