[Hub]/) : Traits : Arm predicted mass (left) :

chr16:88,074,533-90,172,696

Best TWAS P=7.73e-13 · Best GWAS P=1.77e-13 conditioned to 0.00104

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CTU2 0.10 0.07 lasso 5 0.08 4.0e-10 -4.7 5.4 7.3e-08 -0.43 1.00 0.00 FALSE
2 CommonMind Brain Pre-frontal Cortex SPG7 0.14 0.06 blup 445 0.10 3.2e-12 5.7 -5.7 1.5e-08 -0.02 0.01 0.99 FALSE
3 GTEx Artery Aorta RPL13 0.19 0.20 lasso 5 0.17 1.7e-09 5.4 -6.0 1.6e-09 0.05 0.02 0.98 FALSE
4 GTEx Breast Mammary Tissue RPL13 0.09 0.05 enet 7 0.04 5.3e-03 6.3 -6.1 8.1e-10 0.00 0.02 0.94 FALSE
5 GTEx Cells Transformed fibroblasts RPL13 0.10 0.08 enet 8 0.09 3.7e-07 4.9 -6.2 7.8e-10 0.09 0.03 0.97 FALSE
6 GTEx Cells Transformed fibroblasts RP11-104N10.1 0.07 0.10 lasso 2 0.08 8.3e-07 -5.2 -5.2 1.9e-07 -0.17 0.60 0.39 FALSE
7 GTEx Colon Sigmoid RPL13 0.17 0.18 lasso 1 0.16 3.1e-06 5.4 -5.4 8.1e-08 0.08 0.02 0.98 FALSE
8 GTEx Colon Sigmoid CDK10 0.37 0.12 lasso 8 0.22 2.2e-08 3.7 -5.6 1.7e-08 -0.21 0.46 0.24 FALSE
9 GTEx Colon Sigmoid RP11-104N10.1 0.14 0.00 lasso 2 0.02 8.3e-02 -5.4 -5.5 3.6e-08 -0.17 0.10 0.21 FALSE
10 GTEx Colon Transverse RPL13 0.23 0.17 lasso 4 0.16 3.7e-08 6.2 -7.2 7.7e-13 0.01 0.01 0.99 TRUE
11 GTEx Esophagus Muscularis RPL13 0.17 0.12 lasso 3 0.11 2.4e-07 6.2 -6.4 1.7e-10 0.06 0.01 0.99 FALSE
12 GTEx Muscle Skeletal RPL13 0.10 0.09 lasso 5 0.10 3.3e-10 5.4 -5.7 1.2e-08 0.08 0.02 0.98 FALSE
13 GTEx Muscle Skeletal SPG7 0.24 0.22 lasso 5 0.23 8.9e-23 -5.2 -6.2 4.8e-10 -0.11 0.62 0.38 FALSE
14 GTEx Nerve Tibial RPL13 0.10 0.07 lasso 3 0.07 2.0e-05 5.8 -5.4 7.2e-08 0.09 0.04 0.96 FALSE
15 GTEx Skin Not Sun Exposed Suprapubic RPL13 0.16 0.15 lasso 4 0.15 2.0e-08 5.8 -5.9 4.3e-09 0.09 0.04 0.96 FALSE
16 GTEx Skin Not Sun Exposed Suprapubic RP11-104N10.1 0.11 0.04 lasso 4 0.03 5.2e-03 -5.4 -5.3 1.1e-07 -0.13 0.13 0.49 FALSE
17 GTEx Skin Sun Exposed Lower leg RPL13 0.11 0.13 enet 7 0.12 1.7e-10 5.1 -5.3 1.1e-07 0.06 0.10 0.90 FALSE
18 GTEx Skin Sun Exposed Lower leg SPG7 0.09 0.05 lasso 2 0.03 1.5e-03 6.2 -5.9 2.8e-09 0.08 0.02 0.98 FALSE
19 GTEx Testis RPL13 0.25 0.22 lasso 5 0.21 1.6e-09 5.4 -5.4 6.2e-08 0.09 0.03 0.97 FALSE
20 GTEx Testis RP5-1142A6.2 0.21 0.13 lasso 4 0.12 7.2e-06 -6.0 -6.9 5.1e-12 0.60 0.15 0.34 TRUE
21 GTEx Thyroid RPL13 0.13 0.05 enet 10 0.06 1.4e-05 5.9 -6.8 7.7e-12 -0.02 0.02 0.98 FALSE
22 GTEx Whole Blood SPG7 0.06 0.05 lasso 3 0.05 3.9e-05 5.8 -6.5 1.1e-10 0.01 0.05 0.92 FALSE
23 GTEx Whole Blood CTD-2555A7.3 0.10 0.00 lasso 5 0.01 1.0e-01 2.8 5.5 4.0e-08 -0.19 0.12 0.16 TRUE
24 METSIM Adipose RPL13 0.05 0.05 enet 5 0.05 1.0e-07 5.9 -5.8 4.8e-09 0.07 0.02 0.98 FALSE
25 YFS Blood SPG7 0.08 0.11 lasso 6 0.11 6.9e-34 -5.3 -5.4 5.3e-08 -0.18 0.57 0.43 FALSE
26 The Cancer Genome Atlas Bladder Urothelial Carcinoma SPG7 0.05 0.03 lasso 3 0.03 1.8e-03 5.7 -5.7 1.6e-08 0.08 0.02 0.84 FALSE
27 The Cancer Genome Atlas Esophageal Carcinoma RPL13 0.14 0.07 lasso 3 0.04 2.6e-02 5.7 -5.9 3.2e-09 0.07 0.01 0.80 FALSE
28 The Cancer Genome Atlas Glioblastoma Multiforme SNAI3 0.19 0.06 enet 7 0.12 1.6e-04 2.6 -5.1 3.0e-07 0.44 0.00 0.86 FALSE
29 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma SPG7 0.05 0.05 lasso 5 0.05 1.9e-06 5.7 -5.8 7.9e-09 0.08 0.04 0.96 FALSE
30 The Cancer Genome Atlas Brain Lower Grade Glioma SPG7 0.03 0.02 blup 58 0.03 4.1e-04 4.9 -6.4 1.4e-10 -0.01 0.03 0.70 FALSE
31 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RPL13 0.03 0.01 blup 41 0.02 8.5e-03 5.7 -6.4 1.8e-10 0.01 0.02 0.71 FALSE
32 The Cancer Genome Atlas Pancreatic Adenocarcinoma SPG7 0.11 0.09 lasso 2 0.08 2.5e-04 6.1 -6.1 9.7e-10 0.07 0.02 0.95 FALSE
33 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma CDK10 0.20 0.02 enet 15 0.08 5.3e-04 3.0 -5.4 5.3e-08 -0.08 0.00 0.00 TRUE
34 The Cancer Genome Atlas Stomach Adenocarcinoma RPL13 0.04 0.03 blup 41 0.03 2.2e-03 5.4 -6.5 9.5e-11 0.06 0.02 0.86 FALSE