[Hub]/) : Traits : Arm predicted mass (left) : ← →

chr4:121,982,122-124,538,705

Best TWAS P=1.92e-16 · Best GWAS P=1.06e-13 conditioned to 0.0128

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	BBS7	0.19	0.21	bslmm	423	0.23	1.8e-27	-7.37	-7.5	5.2e-14	0.93	0.00	1.00	FALSE
2	CommonMind	Brain Pre-frontal Cortex	NUDT6	0.04	0.04	lasso	3	0.02	6.5e-04	5.66	5.7	1.1e-08	0.02	0.71	0.05	FALSE
3	CommonMind	Brain Pre-frontal Cortex	TMEM155	0.06	0.05	lasso	3	0.02	5.5e-04	-6.04	-5.6	2.1e-08	0.68	0.12	0.82	FALSE
4	GTEx	Adipose Subcutaneous	EXOSC9	0.07	0.00	lasso	2	0.00	4.5e-01	-5.66	5.4	7.8e-08	-0.83	0.05	0.34	FALSE
5	GTEx	Artery Tibial	FGF2	0.18	0.05	lasso	3	0.02	1.3e-02	5.64	5.9	4.2e-09	-0.01	0.08	0.09	TRUE
6	GTEx	Artery Tibial	NUDT6	0.08	0.08	lasso	5	0.05	5.6e-05	5.58	5.7	9.9e-09	0.02	0.64	0.10	FALSE
7	GTEx	Brain Cerebellum	BBS7	0.20	-0.01	enet	24	0.01	2.2e-01	-5.59	-5.7	9.7e-09	0.73	0.07	0.73	FALSE
8	GTEx	Breast Mammary Tissue	NUDT6	0.25	0.10	lasso	3	0.08	4.2e-05	5.72	5.7	9.9e-09	0.01	0.06	0.92	TRUE
9	GTEx	Breast Mammary Tissue (Male)	NUDT6	0.29	0.00	lasso	6	0.00	3.5e-01	5.52	5.6	2.2e-08	0.04	0.04	0.48	TRUE
10	GTEx	Cells EBV-transformed lymphocytes	EXOSC9	0.29	0.17	lasso	7	0.16	6.6e-06	6.71	7.3	3.2e-13	-0.68	0.24	0.72	FALSE
11	GTEx	Cells Transformed fibroblasts	BBS7	0.16	0.09	lasso	7	0.16	2.9e-12	-7.43	-7.8	5.2e-15	0.91	0.00	1.00	FALSE
12	GTEx	Colon Transverse	BBS12	0.12	0.05	enet	29	0.12	3.2e-06	0.76	5.4	8.5e-08	-0.07	0.04	0.56	TRUE
13	GTEx	Muscle Skeletal	NUDT6	0.15	0.12	lasso	3	0.11	1.1e-10	5.66	5.7	1.1e-08	0.03	0.94	0.06	FALSE
14	GTEx	Muscle Skeletal	RP11-170N16.3	0.07	0.07	lasso	3	0.06	8.8e-07	4.92	5.6	1.9e-08	0.04	0.27	0.72	FALSE
15	GTEx	Nerve Tibial	NUDT6	0.11	0.08	lasso	3	0.05	2.1e-04	5.49	5.5	4.6e-08	0.02	0.78	0.04	FALSE
16	GTEx	Skin Not Sun Exposed Suprapubic	NUDT6	0.07	0.02	lasso	6	0.03	1.5e-02	4.42	5.4	7.1e-08	0.04	0.19	0.61	TRUE
17	GTEx	Skin Sun Exposed Lower leg	NUDT6	0.11	0.08	lasso	3	0.08	6.2e-07	5.52	5.6	2.2e-08	0.03	0.92	0.05	TRUE
18	GTEx	Testis	EXOSC9	0.17	0.07	lasso	8	0.10	2.5e-05	-5.68	7.3	2.7e-13	-0.87	0.01	0.98	FALSE
19	ROSMAP	Brain Pre-frontal Cortex	EXOSC9	0.05	0.02	lasso	7	0.02	5.3e-04	4.74	5.4	6.1e-08	-0.54	0.38	0.36	FALSE
20	ROSMAP	Brain Pre-frontal Cortex	NUDT6	0.04	0.04	enet	9	0.03	2.0e-04	5.62	5.2	2.5e-07	0.03	0.56	0.24	TRUE
21	YFS	Blood	EXOSC9	0.06	0.09	bslmm	401	0.09	7.0e-28	6.58	7.1	1.4e-12	-0.63	0.44	0.56	FALSE
22	The Cancer Genome Atlas	Breast Invasive Carcinoma	EXOSC9	0.03	0.04	enet	9	0.04	2.8e-08	6.92	7.5	4.7e-14	-0.70	0.17	0.83	FALSE
23	The Cancer Genome Atlas	Breast Invasive Carcinoma	NUDT6	0.02	0.02	lasso	4	0.01	5.4e-03	5.58	5.6	2.2e-08	0.04	0.13	0.18	FALSE
24	The Cancer Genome Atlas	Colon Adenocarcinoma	BBS7	0.05	0.00	blup	47	0.02	1.9e-02	6.96	-6.8	1.0e-11	0.56	0.02	0.16	FALSE
25	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	BBS7	0.04	0.02	blup	47	0.03	1.3e-04	-5.65	-5.6	2.2e-08	0.91	0.05	0.91	FALSE
26	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	CCNA2	0.03	0.01	blup	34	0.02	1.5e-03	-7.33	8.2	1.9e-16	-0.80	0.00	0.97	TRUE
27	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	BBS7	0.04	0.04	lasso	2	0.03	6.1e-04	-7.37	-7.4	1.6e-13	1.00	0.00	1.00	FALSE
28	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	FGF2	0.06	0.04	blup	65	0.05	4.4e-06	6.14	5.5	2.9e-08	-0.03	0.01	0.99	TRUE
29	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	EXOSC9	0.03	0.02	lasso	2	0.02	1.0e-03	6.66	7.2	4.3e-13	-0.66	0.08	0.36	FALSE
30	The Cancer Genome Atlas	Prostate Adenocarcinoma	NUDT6	0.10	0.07	lasso	6	0.07	1.0e-07	5.58	5.2	1.6e-07	0.02	0.92	0.08	FALSE
31	The Cancer Genome Atlas	Thyroid Carcinoma	EXOSC9	0.04	0.05	lasso	2	0.04	7.1e-05	6.92	7.8	6.7e-15	-0.78	0.03	0.95	FALSE