[Hub]/) : Traits : Heel bone mineral density (BMD) T-score, automated (right) :

chr6:151,118,271-153,120,904

Best TWAS P=5.35e-83 · Best GWAS P=1.79e-69 conditioned to 0.00143

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ESR1 0.19 0.10 enet 36 0.10 2.2e-12 11.5 -8.9 5.8e-19 -0.03 1.00 0.00 TRUE
2 METSIM Adipose CCDC170 0.14 0.02 blup 621 0.07 6.1e-11 -2.0 -9.3 1.2e-20 0.35 0.99 0.00 TRUE
3 ROSMAP Brain Pre-frontal Cortex CCDC170 0.20 0.06 lasso 10 0.19 7.2e-24 -5.3 -5.2 2.2e-07 0.53 0.11 0.89 FALSE
4 The Cancer Genome Atlas Bladder Urothelial Carcinoma C6orf97 0.05 0.00 blup 133 0.03 1.3e-03 -17.6 -17.5 1.3e-68 0.80 0.01 0.87 TRUE
5 The Cancer Genome Atlas Breast Invasive Carcinoma C6orf97 0.01 0.01 enet 7 0.01 5.3e-03 -8.8 -16.7 2.4e-62 0.82 0.01 0.94 TRUE
6 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C6orf97 0.08 0.02 blup 133 0.07 6.2e-08 -9.5 -13.2 7.6e-40 0.68 0.02 0.98 TRUE
7 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C6orf97 0.06 0.05 lasso 3 0.08 6.9e-09 -10.4 -12.4 2.3e-35 0.58 0.22 0.76 FALSE
8 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma C6orf97 0.18 0.06 lasso 4 0.05 1.1e-03 -5.3 -6.8 8.4e-12 0.49 0.33 0.32 FALSE
9 The Cancer Genome Atlas Brain Lower Grade Glioma C6orf97 0.08 0.04 blup 133 0.09 1.2e-10 -17.6 -14.8 9.1e-50 0.78 0.00 1.00 FALSE
10 The Cancer Genome Atlas Lung Adenocarcinoma C6orf97 0.07 0.03 lasso 5 0.05 1.7e-06 -5.3 -12.2 2.3e-34 0.71 0.01 0.97 FALSE
11 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma C6orf97 0.14 0.01 blup 133 0.08 5.2e-06 -17.6 -12.2 3.2e-34 0.74 0.00 0.94 FALSE
12 The Cancer Genome Atlas Pancreatic Adenocarcinoma C6orf97 0.23 0.10 lasso 11 0.11 1.8e-05 -17.6 -19.3 5.3e-83 0.87 0.00 0.99 TRUE
13 The Cancer Genome Atlas Prostate Adenocarcinoma C6orf97 0.10 0.05 blup 133 0.06 2.6e-07 -17.6 -10.6 4.9e-26 0.72 0.00 1.00 TRUE
14 The Cancer Genome Atlas Stomach Adenocarcinoma C6orf97 0.13 0.02 blup 133 0.05 2.8e-04 -9.5 -11.4 3.1e-30 0.63 0.01 0.90 TRUE
15 The Cancer Genome Atlas Testicular Germ Cell Tumors RMND1 0.19 0.06 blup 58 0.10 1.6e-04 -4.2 5.6 2.2e-08 0.10 0.14 0.20 FALSE
16 The Cancer Genome Atlas Thyroid Carcinoma C6orf97 0.08 0.02 lasso 4 0.06 3.4e-06 -16.5 -14.7 8.7e-49 0.85 0.01 0.98 TRUE