[Hub]/) : Traits : Standing height : ← →

chr4:121,982,122-124,538,705

Best TWAS P=3.23e-18 · Best GWAS P=2.12e-15 conditioned to 0.622

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
23	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	CCNA2	0.03	0.01	blup	34	0.02	1.5e-03	-7.9	8.7	3.2e-18	-0.80	0.00	0.97	TRUE
12	GTEx	Colon Transverse	BBS12	0.12	0.05	enet	29	0.12	3.2e-06	-2.0	7.2	4.1e-13	-0.07	0.05	0.46	TRUE
5	GTEx	Brain Cerebellar Hemisphere	NUDT6	0.32	0.07	enet	16	0.16	5.0e-05	-4.7	-5.2	2.0e-07	0.03	0.20	0.10	TRUE
11	GTEx	Cells Transformed fibroblasts	BBS7	0.16	0.09	lasso	7	0.16	2.9e-12	-7.9	-8.5	1.5e-17	0.91	0.00	1.00	FALSE
19	The Cancer Genome Atlas	Breast Invasive Carcinoma	EXOSC9	0.03	0.04	enet	9	0.04	2.8e-08	6.9	8.1	5.4e-16	-0.70	0.35	0.65	FALSE
1	CommonMind	Brain Pre-frontal Cortex	BBS7	0.19	0.21	bslmm	423	0.23	1.8e-27	-7.9	-8.0	1.1e-15	0.93	0.00	1.00	FALSE
26	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	EXOSC9	0.03	0.02	lasso	2	0.02	1.0e-03	7.4	8.0	1.2e-15	-0.66	0.07	0.40	FALSE
27	The Cancer Genome Atlas	Thyroid Carcinoma	EXOSC9	0.04	0.05	lasso	2	0.04	7.1e-05	6.9	7.9	2.0e-15	-0.78	0.03	0.94	FALSE
10	GTEx	Cells EBV-transformed lymphocytes	EXOSC9	0.29	0.17	lasso	7	0.16	6.6e-06	7.2	7.9	2.9e-15	-0.68	0.17	0.81	FALSE
24	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	BBS7	0.04	0.04	lasso	2	0.03	6.1e-04	-7.9	-7.9	3.2e-15	1.00	0.00	1.00	FALSE
16	GTEx	Testis	EXOSC9	0.17	0.07	lasso	8	0.10	2.5e-05	-6.0	7.8	4.1e-15	-0.87	0.01	0.98	FALSE
18	YFS	Blood	EXOSC9	0.06	0.09	bslmm	401	0.09	7.0e-28	7.5	7.4	1.1e-13	-0.63	0.10	0.90	FALSE
21	The Cancer Genome Atlas	Colon Adenocarcinoma	BBS7	0.05	0.00	blup	47	0.02	1.9e-02	6.9	-6.9	3.8e-12	0.56	0.02	0.14	FALSE
17	ROSMAP	Brain Pre-frontal Cortex	EXOSC9	0.05	0.02	lasso	7	0.02	5.3e-04	6.6	6.9	6.4e-12	-0.54	0.42	0.30	FALSE
6	GTEx	Brain Cerebellum	BBS7	0.20	-0.01	enet	24	0.01	2.2e-01	-6.0	-6.6	4.7e-11	0.73	0.07	0.73	FALSE
25	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	FGF2	0.06	0.04	blup	65	0.05	4.4e-06	6.8	6.5	1.1e-10	-0.03	0.00	0.99	FALSE
7	GTEx	Breast Mammary Tissue	NUDT6	0.25	0.10	lasso	3	0.08	4.2e-05	6.2	6.3	3.4e-10	0.01	0.05	0.93	FALSE
2	CommonMind	Brain Pre-frontal Cortex	TMEM155	0.06	0.05	lasso	3	0.02	5.5e-04	-6.5	-6.1	1.1e-09	0.68	0.12	0.82	FALSE
22	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	BBS7	0.04	0.02	blup	47	0.03	1.3e-04	-6.0	-6.1	1.1e-09	0.91	0.05	0.91	FALSE
3	GTEx	Adipose Subcutaneous	EXOSC9	0.07	0.00	lasso	2	0.00	4.5e-01	-6.1	6.0	1.6e-09	-0.83	0.05	0.34	FALSE
8	GTEx	Breast Mammary Tissue (Male)	NUDT6	0.29	0.00	lasso	6	0.00	3.5e-01	5.5	5.9	3.1e-09	0.04	0.03	0.50	FALSE
15	GTEx	Skin Sun Exposed Lower leg	NUDT6	0.11	0.08	lasso	3	0.08	6.2e-07	5.5	5.5	3.5e-08	0.03	0.90	0.07	FALSE
9	GTEx	Breast Mammary Tissue (Female)	NUDT6	0.30	-0.01	enet	30	0.00	2.6e-01	6.6	5.5	4.0e-08	-0.03	0.03	0.33	FALSE
14	GTEx	Skin Not Sun Exposed Suprapubic	NUDT6	0.07	0.02	lasso	6	0.03	1.5e-02	4.5	5.4	5.7e-08	0.04	0.11	0.76	FALSE
13	GTEx	Muscle Skeletal	RP11-170N16.3	0.07	0.07	lasso	3	0.06	8.8e-07	4.8	5.3	8.6e-08	0.04	0.46	0.52	FALSE
4	GTEx	Brain Cerebellar Hemisphere	BBS7	0.27	0.05	lasso	3	0.08	4.7e-03	-6.0	-5.3	9.1e-08	0.61	0.08	0.34	FALSE
20	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	CCNA2	0.11	-0.01	enet	14	0.02	4.4e-02	1.5	5.2	1.8e-07	-0.56	0.00	0.28	FALSE