[Hub]/) : Traits : Height : →

chr1:752,566-4,471,434

Best TWAS P=5.19e-25 · Best GWAS P=3.71e-28 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	RER1	0.06	0.00	blup	359	0.01	8.1e-03	1.88	-8.8	1.1e-18	-0.28	0.04	0.16	TRUE
2	CommonMind	Brain Pre-frontal Cortex	TNFRSF14	0.05	0.00	blup	372	0.02	1.5e-03	10.06	8.3	1.3e-16	0.39	0.07	0.14	FALSE
3	GTEx	Adipose Subcutaneous	C1orf86	0.15	0.05	enet	10	0.04	2.0e-04	-7.84	-6.4	1.7e-10	-0.37	0.43	0.03	TRUE
4	GTEx	Adipose Subcutaneous	RP11-181G12.2	0.09	0.07	lasso	1	0.05	1.3e-04	-7.84	7.8	4.5e-15	0.47	0.50	0.34	FALSE
5	GTEx	Adipose Visceral Omentum	RP11-345P4.6	0.40	0.24	enet	28	0.20	1.8e-10	3.94	7.5	8.6e-14	0.19	1.00	0.00	TRUE
6	GTEx	Artery Aorta	RP11-181G12.2	0.12	0.04	enet	12	0.05	6.3e-04	9.61	7.7	1.4e-14	0.44	0.26	0.33	FALSE
7	GTEx	Artery Aorta	RP11-54O7.17	0.28	0.28	lasso	3	0.30	3.8e-17	5.75	-5.5	3.9e-08	0.01	0.02	0.98	FALSE
8	GTEx	Artery Tibial	RP11-181G12.2	0.09	0.02	enet	37	0.03	2.8e-03	-7.84	6.4	2.0e-10	0.41	0.06	0.59	TRUE
9	GTEx	Brain Cerebellum	C1orf86	0.26	0.18	lasso	5	0.16	1.4e-05	-7.84	-5.8	7.1e-09	-0.44	0.09	0.07	FALSE
10	GTEx	Brain Cortex	PLCH2	0.27	0.03	enet	17	0.04	2.6e-02	-0.61	-6.4	1.8e-10	-0.38	0.04	0.28	TRUE
11	GTEx	Breast Mammary Tissue (Male)	ATAD3C	0.14	-0.01	enet	35	0.01	1.7e-01	5.49	-5.6	1.8e-08	0.02	0.03	0.10	FALSE
12	GTEx	Breast Mammary Tissue (Female)	B3GALT6	0.19	0.16	lasso	5	0.12	2.2e-04	5.53	-5.5	3.2e-08	0.02	0.04	0.37	FALSE
13	GTEx	Breast Mammary Tissue (Female)	SLC35E2B	0.11	0.01	enet	22	0.09	9.1e-04	-1.39	5.5	3.6e-08	0.34	0.03	0.28	FALSE
14	GTEx	Breast Mammary Tissue (Female)	MRPL20	0.18	-0.01	enet	10	0.00	4.5e-01	5.53	6.0	2.5e-09	-0.03	0.03	0.14	TRUE
15	GTEx	Cells Transformed fibroblasts	AGRN	0.12	0.01	enet	15	0.05	2.0e-04	-1.85	-6.5	1.1e-10	0.02	0.01	0.74	TRUE
16	GTEx	Cells Transformed fibroblasts	MRPL20	0.12	0.11	lasso	2	0.08	8.0e-07	5.83	5.9	4.4e-09	-0.08	0.02	0.98	FALSE
17	GTEx	Cells Transformed fibroblasts	RP11-54O7.14	0.13	0.02	enet	13	0.05	1.5e-04	-3.82	-5.8	7.4e-09	0.00	0.01	0.82	FALSE
18	GTEx	Esophagus Gastroesophageal Junction	RP11-181G12.2	0.16	0.02	enet	18	0.01	1.1e-01	10.03	10.3	5.2e-25	0.62	0.07	0.42	TRUE
19	GTEx	Esophagus Mucosa	RP11-54O7.17	0.16	0.17	lasso	4	0.16	1.3e-10	5.75	-5.8	6.9e-09	0.00	0.02	0.98	FALSE
20	GTEx	Esophagus Muscularis	RP11-181G12.2	0.23	0.14	lasso	4	0.19	1.0e-11	9.61	10.2	1.6e-24	0.61	0.96	0.04	FALSE
21	GTEx	Heart Left Ventricle	CEP104	0.19	0.04	lasso	4	0.05	1.2e-03	4.14	-5.5	3.2e-08	-0.07	0.18	0.07	TRUE
22	GTEx	Lung	AL590822.2	0.09	0.00	lasso	3	0.00	2.0e-01	7.92	9.4	3.8e-21	0.53	0.07	0.23	TRUE
23	GTEx	Lung	RP11-54O7.17	0.10	0.13	lasso	2	0.11	5.9e-09	5.75	-5.6	2.3e-08	0.00	0.02	0.98	FALSE
24	GTEx	Muscle Skeletal	C1orf86	0.20	0.16	lasso	4	0.15	8.0e-15	-7.84	-7.9	3.9e-15	-0.47	1.00	0.00	FALSE
25	GTEx	Muscle Skeletal	RP11-181G12.2	0.12	0.13	enet	8	0.14	7.6e-14	-7.84	8.7	3.8e-18	0.57	1.00	0.00	FALSE
26	GTEx	Nerve Tibial	RP11-181G12.2	0.24	0.22	lasso	5	0.21	3.7e-15	-7.84	8.1	6.7e-16	0.49	1.00	0.00	FALSE
27	GTEx	Nerve Tibial	RP11-54O7.17	0.16	0.16	lasso	3	0.15	7.3e-11	5.75	-5.7	1.1e-08	0.01	0.02	0.98	FALSE
28	GTEx	Pancreas	MRPL20	0.28	0.21	lasso	2	0.20	1.2e-08	5.83	5.8	5.1e-09	-0.08	0.01	0.98	FALSE
29	GTEx	Pancreas	RP11-54O7.17	0.24	0.22	lasso	3	0.18	2.9e-08	5.75	-5.7	9.7e-09	0.00	0.02	0.98	FALSE
30	GTEx	Skin Not Sun Exposed Suprapubic	RP11-54O7.17	0.23	0.10	enet	16	0.14	3.1e-08	3.68	-5.9	2.9e-09	0.02	0.29	0.70	FALSE
31	GTEx	Testis	C1orf86	0.34	0.23	enet	16	0.19	1.2e-08	-7.84	-6.8	1.2e-11	-0.46	0.99	0.00	FALSE
32	GTEx	Thyroid	PRKCZ	0.16	0.03	lasso	4	0.08	1.9e-06	-7.20	-9.8	1.7e-22	-0.44	0.28	0.04	FALSE
33	GTEx	Thyroid	FAM213B	0.10	0.00	enet	36	0.00	7.9e-01	-1.01	-6.3	3.4e-10	-0.04	0.11	0.03	FALSE
34	GTEx	Thyroid	RP11-181G12.2	0.21	0.05	enet	54	0.08	1.7e-06	7.96	-6.8	9.7e-12	-0.28	0.10	0.04	FALSE
35	GTEx	Thyroid	RP11-54O7.17	0.25	0.19	enet	15	0.18	4.0e-14	5.73	-5.3	8.7e-08	0.00	0.02	0.98	FALSE
36	METSIM	Adipose	B3GALT6	0.15	0.14	bslmm	227	0.14	1.2e-19	3.79	-5.2	2.0e-07	0.02	0.89	0.11	FALSE
37	METSIM	Adipose	MRPL20	0.13	0.11	lasso	5	0.10	9.7e-15	5.83	5.8	6.9e-09	-0.08	0.01	0.99	FALSE
38	METSIM	Adipose	TNFRSF14	0.07	0.05	blup	373	0.05	1.9e-07	0.91	6.5	7.1e-11	0.30	0.97	0.02	TRUE
39	METSIM	Adipose	TNFRSF18	0.09	0.10	lasso	7	0.09	1.8e-13	4.83	-5.3	1.3e-07	0.03	0.81	0.19	FALSE
40	ROSMAP	Brain Pre-frontal Cortex	SSU72	0.05	0.01	blup	277	0.02	3.1e-03	4.49	5.7	1.6e-08	0.01	0.06	0.41	FALSE
41	ROSMAP	Brain Pre-frontal Cortex	PUSL1	0.10	0.06	lasso	3	0.06	9.9e-08	5.67	-5.6	2.3e-08	0.08	0.07	0.93	FALSE
42	ROSMAP	Brain Pre-frontal Cortex	B3GALT6	0.04	0.02	lasso	3	0.02	7.8e-04	4.27	-5.5	2.8e-08	0.01	0.05	0.91	FALSE
43	ROSMAP	Brain Pre-frontal Cortex	MRPL20	0.16	0.15	enet	9	0.16	7.4e-20	5.67	5.8	6.7e-09	-0.07	0.04	0.96	FALSE
44	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	C1orf86	0.03	0.02	blup	49	0.01	1.3e-02	10.05	9.1	7.9e-20	0.60	0.07	0.27	TRUE
45	The Cancer Genome Atlas	Prostate Adenocarcinoma	C1orf86	0.04	0.02	lasso	5	0.02	1.5e-03	10.05	8.0	1.1e-15	0.53	0.06	0.17	FALSE
46	The Cancer Genome Atlas	Thyroid Carcinoma	AGRN	0.05	0.00	blup	40	0.03	1.5e-03	5.73	-6.3	2.6e-10	0.00	0.00	0.81	FALSE
47	The Cancer Genome Atlas	Thyroid Carcinoma	PRKCZ	0.12	0.03	enet	6	0.02	9.0e-03	8.00	-7.7	1.0e-14	-0.26	0.57	0.06	FALSE