Best TWAS P=1.51e-55 · Best GWAS P=2.74e-67 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CCBL2 | 0.58 | 0.68 | lasso | 7 | 0.69 | 1.4e-117 | -13.27 | 14.0 | 1.4e-44 | -0.66 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | GBP3 | 0.64 | 0.69 | lasso | 6 | 0.69 | 1.4e-115 | -6.71 | 6.9 | 4.3e-12 | -0.16 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | RBMXL1 | 0.06 | 0.00 | lasso | 3 | 0.03 | 1.7e-04 | -8.37 | 6.9 | 6.8e-12 | -0.13 | 0.12 | 0.03 | FALSE |
4 | GTEx | Adipose Subcutaneous | GBP3 | 0.50 | 0.35 | lasso | 4 | 0.34 | 8.0e-29 | -6.71 | 7.3 | 3.6e-13 | -0.16 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | CCBL2 | 0.26 | 0.21 | enet | 15 | 0.23 | 1.2e-18 | -13.39 | 15.0 | 1.4e-50 | -0.62 | 1.00 | 0.00 | TRUE |
6 | GTEx | Adipose Subcutaneous | RBMXL1 | 0.10 | 0.02 | lasso | 8 | 0.02 | 1.4e-02 | -6.71 | 7.8 | 7.8e-15 | -0.18 | 0.13 | 0.09 | FALSE |
7 | GTEx | Adipose Visceral Omentum | PKN2 | 0.09 | 0.04 | enet | 8 | 0.05 | 1.2e-03 | -13.09 | -12.9 | 4.0e-38 | 0.63 | 0.36 | 0.25 | FALSE |
8 | GTEx | Adipose Visceral Omentum | GBP3 | 0.32 | 0.27 | enet | 10 | 0.30 | 5.7e-16 | -6.71 | 6.9 | 6.5e-12 | -0.15 | 1.00 | 0.00 | TRUE |
9 | GTEx | Adipose Visceral Omentum | CCBL2 | 0.21 | 0.10 | enet | 7 | 0.15 | 5.2e-08 | -13.25 | 14.8 | 9.6e-50 | -0.67 | 0.85 | 0.13 | FALSE |
10 | GTEx | Adrenal Gland | GBP3 | 0.43 | 0.40 | lasso | 4 | 0.38 | 8.1e-15 | -6.71 | 6.8 | 7.6e-12 | -0.16 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adrenal Gland | CCBL2 | 0.18 | 0.13 | enet | 46 | 0.14 | 1.4e-05 | -13.90 | 12.6 | 3.8e-36 | -0.51 | 0.16 | 0.78 | FALSE |
12 | GTEx | Artery Aorta | GBP3 | 0.59 | 0.48 | lasso | 5 | 0.48 | 7.5e-30 | -6.71 | 6.7 | 2.0e-11 | -0.15 | 1.00 | 0.00 | FALSE |
13 | GTEx | Artery Aorta | CCBL2 | 0.29 | 0.20 | enet | 24 | 0.24 | 1.5e-13 | -13.25 | 14.6 | 2.2e-48 | -0.63 | 0.98 | 0.02 | FALSE |
14 | GTEx | Artery Coronary | GBP3 | 0.51 | 0.46 | lasso | 3 | 0.45 | 1.1e-16 | -6.71 | 6.4 | 1.6e-10 | -0.14 | 1.00 | 0.00 | FALSE |
15 | GTEx | Artery Coronary | CCBL2 | 0.29 | 0.19 | enet | 5 | 0.14 | 1.6e-05 | -13.87 | 13.8 | 2.8e-43 | -0.68 | 0.67 | 0.15 | FALSE |
16 | GTEx | Artery Tibial | GBP3 | 0.68 | 0.49 | lasso | 7 | 0.52 | 1.8e-47 | -6.71 | 7.0 | 3.3e-12 | -0.13 | 1.00 | 0.00 | FALSE |
17 | GTEx | Artery Tibial | CCBL2 | 0.30 | 0.24 | lasso | 8 | 0.29 | 4.9e-23 | -13.27 | 15.6 | 1.4e-54 | -0.67 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Tibial | RBMXL1 | 0.06 | 0.06 | enet | 16 | 0.05 | 1.1e-04 | 7.45 | 9.8 | 1.2e-22 | -0.25 | 0.80 | 0.02 | FALSE |
19 | GTEx | Brain Caudate basal ganglia | GBP3 | 0.22 | 0.29 | lasso | 3 | 0.30 | 3.4e-09 | -7.04 | 7.2 | 8.9e-13 | -0.12 | 0.88 | 0.01 | FALSE |
20 | GTEx | Brain Caudate basal ganglia | CCBL2 | 0.27 | 0.21 | enet | 30 | 0.29 | 7.0e-09 | -13.33 | 12.2 | 2.3e-34 | -0.58 | 0.86 | 0.09 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | GBP3 | 0.46 | 0.19 | lasso | 3 | 0.18 | 2.2e-05 | -7.04 | 7.0 | 2.4e-12 | -0.12 | 0.78 | 0.01 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | CCBL2 | 0.31 | 0.18 | lasso | 5 | 0.23 | 1.7e-06 | -13.09 | 15.6 | 6.3e-55 | -0.80 | 0.17 | 0.79 | FALSE |
23 | GTEx | Brain Cerebellum | CCBL2 | 0.39 | 0.30 | enet | 23 | 0.33 | 1.7e-10 | -13.17 | 14.5 | 2.1e-47 | -0.60 | 0.70 | 0.29 | FALSE |
24 | GTEx | Brain Cortex | CCBL2 | 0.59 | 0.39 | enet | 13 | 0.37 | 3.0e-11 | -13.09 | 13.9 | 5.8e-44 | -0.68 | 0.95 | 0.05 | FALSE |
25 | GTEx | Brain Frontal Cortex BA9 | CCBL2 | 0.47 | 0.38 | enet | 25 | 0.48 | 1.5e-14 | -13.25 | 13.8 | 4.7e-43 | -0.66 | 0.96 | 0.04 | FALSE |
26 | GTEx | Brain Hippocampus | GBP3 | 0.54 | 0.45 | lasso | 5 | 0.48 | 5.9e-13 | -7.04 | 6.7 | 1.7e-11 | -0.08 | 0.92 | 0.02 | FALSE |
27 | GTEx | Brain Hippocampus | CCBL2 | 0.39 | 0.27 | lasso | 5 | 0.13 | 5.1e-04 | -13.39 | -13.1 | 2.8e-39 | 0.60 | 0.21 | 0.28 | FALSE |
28 | GTEx | Brain Hypothalamus | GBP3 | 0.24 | 0.40 | lasso | 2 | 0.37 | 1.6e-09 | -6.56 | 6.7 | 1.9e-11 | -0.15 | 0.85 | 0.02 | FALSE |
29 | GTEx | Brain Hypothalamus | CCBL2 | 0.34 | 0.00 | enet | 34 | 0.13 | 6.4e-04 | -13.39 | 12.9 | 4.5e-38 | -0.46 | 0.21 | 0.26 | FALSE |
30 | GTEx | Brain Nucleus accumbens basal ganglia | GBP3 | 0.26 | 0.36 | lasso | 5 | 0.36 | 1.5e-10 | -6.56 | 7.2 | 6.6e-13 | -0.15 | 0.98 | 0.00 | FALSE |
31 | GTEx | Brain Nucleus accumbens basal ganglia | CCBL2 | 0.38 | 0.44 | enet | 20 | 0.32 | 2.1e-09 | -13.46 | 15.1 | 1.7e-51 | -0.72 | 0.74 | 0.26 | FALSE |
32 | GTEx | Brain Putamen basal ganglia | CCBL2 | 0.35 | 0.26 | enet | 21 | 0.25 | 1.2e-06 | -13.33 | 14.1 | 4.8e-45 | -0.61 | 0.34 | 0.50 | FALSE |
33 | GTEx | Breast Mammary Tissue | GBP3 | 0.58 | 0.40 | enet | 20 | 0.44 | 6.3e-25 | -6.56 | 8.1 | 6.6e-16 | -0.18 | 1.00 | 0.00 | FALSE |
34 | GTEx | Breast Mammary Tissue | CCBL2 | 0.15 | 0.11 | lasso | 5 | 0.09 | 1.8e-05 | -13.27 | 13.3 | 1.7e-40 | -0.65 | 0.73 | 0.23 | FALSE |
35 | GTEx | Breast Mammary Tissue (Male) | GBP3 | 0.41 | 0.30 | lasso | 6 | 0.34 | 9.3e-09 | -7.04 | 7.5 | 9.2e-14 | -0.13 | 0.81 | 0.07 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | CCBL2 | 0.14 | 0.03 | lasso | 2 | 0.02 | 8.8e-02 | -13.27 | 13.3 | 3.5e-40 | -0.64 | 0.05 | 0.30 | FALSE |
37 | GTEx | Breast Mammary Tissue (Female) | GBP3 | 0.24 | 0.21 | lasso | 3 | 0.26 | 3.3e-08 | -6.56 | 7.7 | 1.2e-14 | -0.16 | 0.83 | 0.01 | FALSE |
38 | GTEx | Breast Mammary Tissue (Female) | CCBL2 | 0.09 | 0.05 | lasso | 2 | 0.04 | 2.4e-02 | -0.68 | 8.7 | 3.4e-18 | -0.44 | 0.04 | 0.28 | FALSE |
39 | GTEx | Cells EBV-transformed lymphocytes | GBP3 | 0.36 | 0.33 | enet | 10 | 0.38 | 2.0e-13 | -6.71 | 6.1 | 1.1e-09 | -0.09 | 1.00 | 0.00 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | GBP3 | 0.74 | 0.67 | enet | 12 | 0.71 | 5.9e-74 | -6.71 | 6.5 | 6.4e-11 | -0.14 | 1.00 | 0.00 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | CCBL2 | 0.65 | 0.61 | enet | 32 | 0.67 | 6.1e-67 | -13.27 | 14.5 | 2.4e-47 | -0.66 | 1.00 | 0.00 | FALSE |
42 | GTEx | Colon Sigmoid | GBP3 | 0.33 | 0.38 | enet | 10 | 0.34 | 7.7e-13 | -6.71 | 6.7 | 2.0e-11 | -0.13 | 1.00 | 0.00 | FALSE |
43 | GTEx | Colon Sigmoid | CCBL2 | 0.22 | 0.12 | enet | 4 | 0.09 | 5.2e-04 | -13.17 | 13.3 | 1.9e-40 | -0.64 | 0.40 | 0.26 | FALSE |
44 | GTEx | Colon Transverse | PKN2 | 0.23 | 0.08 | lasso | 7 | 0.08 | 1.0e-04 | 7.17 | 11.7 | 9.8e-32 | -0.69 | 0.19 | 0.76 | FALSE |
45 | GTEx | Colon Transverse | GBP3 | 0.47 | 0.38 | lasso | 5 | 0.40 | 1.3e-20 | -6.56 | 7.1 | 1.4e-12 | -0.17 | 1.00 | 0.00 | FALSE |
46 | GTEx | Colon Transverse | CCBL2 | 0.30 | 0.19 | lasso | 8 | 0.26 | 1.2e-12 | -13.33 | 14.7 | 3.9e-49 | -0.66 | 0.98 | 0.02 | FALSE |
47 | GTEx | Esophagus Gastroesophageal Junction | GBP3 | 0.17 | 0.33 | lasso | 2 | 0.30 | 1.7e-11 | -6.71 | 6.7 | 1.7e-11 | -0.15 | 1.00 | 0.00 | FALSE |
48 | GTEx | Esophagus Gastroesophageal Junction | CCBL2 | 0.27 | 0.20 | enet | 33 | 0.18 | 4.4e-07 | -13.17 | 10.0 | 1.6e-23 | -0.51 | 0.77 | 0.05 | FALSE |
49 | GTEx | Esophagus Mucosa | GBP3 | 0.41 | 0.34 | enet | 8 | 0.36 | 4.1e-25 | -6.71 | 7.6 | 3.6e-14 | -0.15 | 1.00 | 0.00 | FALSE |
50 | GTEx | Esophagus Mucosa | CCBL2 | 0.35 | 0.19 | enet | 27 | 0.30 | 2.7e-20 | -13.27 | 14.0 | 1.8e-44 | -0.55 | 0.83 | 0.17 | FALSE |
51 | GTEx | Esophagus Mucosa | RBMXL1 | 0.16 | 0.13 | lasso | 6 | 0.16 | 5.1e-11 | 7.45 | 6.8 | 1.4e-11 | -0.13 | 1.00 | 0.00 | FALSE |
52 | GTEx | Esophagus Muscularis | GBP3 | 0.19 | 0.24 | lasso | 4 | 0.24 | 7.3e-15 | -6.56 | 6.7 | 3.0e-11 | -0.15 | 1.00 | 0.00 | FALSE |
53 | GTEx | Esophagus Muscularis | CCBL2 | 0.25 | 0.29 | enet | 18 | 0.28 | 1.6e-17 | -13.39 | 14.3 | 2.8e-46 | -0.67 | 1.00 | 0.00 | FALSE |
54 | GTEx | Heart Atrial Appendage | GBP3 | 0.22 | 0.24 | lasso | 4 | 0.23 | 1.0e-10 | -6.71 | 7.5 | 7.9e-14 | -0.18 | 1.00 | 0.00 | FALSE |
55 | GTEx | Heart Atrial Appendage | CCBL2 | 0.30 | 0.20 | enet | 11 | 0.15 | 3.4e-07 | -13.39 | 13.7 | 7.2e-43 | -0.66 | 0.99 | 0.00 | FALSE |
56 | GTEx | Heart Left Ventricle | GBP3 | 0.08 | 0.13 | lasso | 2 | 0.08 | 6.7e-05 | -6.71 | 6.8 | 1.1e-11 | -0.15 | 0.50 | 0.04 | FALSE |
57 | GTEx | Liver | GBP3 | 0.27 | 0.31 | lasso | 5 | 0.34 | 3.9e-10 | -6.71 | 6.8 | 1.1e-11 | -0.15 | 0.84 | 0.04 | FALSE |
58 | GTEx | Lung | GBP3 | 0.40 | 0.32 | lasso | 3 | 0.33 | 1.1e-25 | -6.71 | 6.6 | 3.1e-11 | -0.15 | 1.00 | 0.00 | FALSE |
59 | GTEx | Lung | CCBL2 | 0.15 | 0.13 | enet | 13 | 0.17 | 4.8e-13 | -13.24 | 14.7 | 4.9e-49 | -0.62 | 0.93 | 0.07 | FALSE |
60 | GTEx | Muscle Skeletal | GBP3 | 0.35 | 0.22 | enet | 13 | 0.26 | 7.4e-25 | -6.71 | 7.8 | 4.8e-15 | -0.16 | 1.00 | 0.00 | FALSE |
61 | GTEx | Muscle Skeletal | CCBL2 | 0.12 | 0.15 | enet | 9 | 0.16 | 5.4e-15 | -13.39 | 13.4 | 6.5e-41 | -0.65 | 1.00 | 0.00 | FALSE |
62 | GTEx | Nerve Tibial | GBP3 | 0.45 | 0.43 | enet | 8 | 0.46 | 4.4e-36 | -6.71 | 7.6 | 3.0e-14 | -0.16 | 1.00 | 0.00 | FALSE |
63 | GTEx | Nerve Tibial | CCBL2 | 0.42 | 0.33 | enet | 38 | 0.38 | 3.4e-28 | -13.27 | 14.2 | 6.4e-46 | -0.64 | 1.00 | 0.00 | FALSE |
64 | GTEx | Ovary | GBP3 | 0.41 | 0.32 | lasso | 1 | 0.33 | 7.0e-09 | -6.71 | 6.7 | 1.9e-11 | -0.15 | 0.67 | 0.06 | FALSE |
65 | GTEx | Pancreas | GBP3 | 0.39 | 0.26 | enet | 32 | 0.28 | 2.4e-12 | -6.71 | 9.1 | 1.0e-19 | -0.28 | 1.00 | 0.00 | FALSE |
66 | GTEx | Pancreas | CCBL2 | 0.26 | 0.21 | lasso | 4 | 0.23 | 5.3e-10 | -13.09 | 14.1 | 3.7e-45 | -0.56 | 0.67 | 0.28 | FALSE |
67 | GTEx | Pituitary | GBP3 | 0.30 | 0.15 | lasso | 4 | 0.20 | 1.1e-05 | -6.04 | 6.9 | 5.6e-12 | -0.14 | 0.22 | 0.05 | TRUE |
68 | GTEx | Pituitary | CCBL2 | 0.45 | 0.30 | lasso | 2 | 0.26 | 2.7e-07 | -13.09 | 13.9 | 3.9e-44 | -0.67 | 0.79 | 0.15 | FALSE |
69 | GTEx | Prostate | GBP3 | 0.29 | 0.32 | lasso | 2 | 0.30 | 3.7e-08 | -6.71 | 6.8 | 1.2e-11 | -0.15 | 0.78 | 0.02 | FALSE |
70 | GTEx | Skin Not Sun Exposed Suprapubic | GBP3 | 0.49 | 0.35 | lasso | 9 | 0.34 | 1.2e-19 | -6.71 | 7.0 | 1.8e-12 | -0.15 | 1.00 | 0.00 | FALSE |
71 | GTEx | Skin Not Sun Exposed Suprapubic | CCBL2 | 0.25 | 0.00 | enet | 27 | 0.08 | 4.2e-05 | -6.56 | 10.6 | 3.9e-26 | -0.31 | 0.38 | 0.11 | FALSE |
72 | GTEx | Skin Sun Exposed Lower leg | GBP3 | 0.25 | 0.20 | lasso | 11 | 0.17 | 3.7e-14 | -6.71 | 6.9 | 3.9e-12 | -0.16 | 1.00 | 0.00 | FALSE |
73 | GTEx | Skin Sun Exposed Lower leg | CCBL2 | 0.18 | 0.09 | enet | 12 | 0.17 | 4.0e-14 | -13.46 | 15.0 | 4.9e-51 | -0.60 | 0.94 | 0.06 | FALSE |
74 | GTEx | Skin Sun Exposed Lower leg | RBMXL1 | 0.09 | 0.06 | lasso | 6 | 0.08 | 6.9e-07 | 7.45 | 8.0 | 9.2e-16 | -0.14 | 0.99 | 0.00 | TRUE |
75 | GTEx | Small Intestine Terminal Ileum | PKN2 | 0.26 | 0.34 | lasso | 5 | 0.23 | 7.0e-06 | -12.22 | 12.1 | 9.3e-34 | -0.72 | 0.53 | 0.16 | FALSE |
76 | GTEx | Small Intestine Terminal Ileum | GBP3 | 0.40 | 0.40 | lasso | 5 | 0.37 | 3.2e-09 | -6.56 | 7.3 | 2.6e-13 | -0.15 | 0.77 | 0.04 | FALSE |
77 | GTEx | Spleen | GBP3 | 0.37 | 0.32 | lasso | 4 | 0.32 | 5.2e-09 | -6.76 | 7.5 | 7.1e-14 | -0.13 | 0.96 | 0.00 | FALSE |
78 | GTEx | Stomach | GBP3 | 0.27 | 0.18 | lasso | 5 | 0.16 | 4.6e-08 | -6.56 | 6.6 | 3.5e-11 | -0.13 | 0.99 | 0.00 | FALSE |
79 | GTEx | Stomach | CCBL2 | 0.16 | 0.08 | lasso | 4 | 0.15 | 9.0e-08 | -13.33 | 15.7 | 1.5e-55 | -0.79 | 0.21 | 0.77 | TRUE |
80 | GTEx | Testis | GBP3 | 0.21 | 0.14 | lasso | 4 | 0.16 | 8.8e-08 | -6.76 | 6.3 | 2.1e-10 | -0.08 | 0.85 | 0.01 | FALSE |
81 | GTEx | Testis | CCBL2 | 0.47 | 0.56 | lasso | 5 | 0.57 | 1.2e-30 | -13.33 | 13.4 | 9.5e-41 | -0.65 | 1.00 | 0.00 | FALSE |
82 | GTEx | Thyroid | GBP3 | 0.48 | 0.39 | lasso | 7 | 0.40 | 5.8e-33 | -6.56 | 6.4 | 1.2e-10 | -0.13 | 1.00 | 0.00 | FALSE |
83 | GTEx | Thyroid | CCBL2 | 0.22 | 0.15 | enet | 22 | 0.22 | 9.8e-17 | -13.09 | 15.2 | 2.7e-52 | -0.62 | 1.00 | 0.00 | FALSE |
84 | GTEx | Thyroid | RBMXL1 | 0.09 | 0.02 | enet | 19 | 0.04 | 2.7e-04 | -6.71 | 13.9 | 5.5e-44 | -0.54 | 0.14 | 0.58 | FALSE |
85 | GTEx | Vagina | GBP3 | 0.42 | 0.49 | enet | 18 | 0.49 | 6.5e-13 | -6.71 | 9.6 | 1.3e-21 | -0.27 | 0.89 | 0.08 | FALSE |
86 | GTEx | Whole Blood | GBP3 | 0.17 | 0.09 | lasso | 3 | 0.07 | 6.2e-07 | -6.71 | 6.8 | 7.7e-12 | -0.17 | 0.99 | 0.00 | FALSE |
87 | GTEx | Whole Blood | CCBL2 | 0.08 | 0.07 | lasso | 3 | 0.06 | 3.1e-06 | -13.27 | 13.3 | 3.1e-40 | -0.65 | 0.74 | 0.22 | FALSE |
88 | METSIM | Adipose | CCBL2 | 0.27 | 0.14 | lasso | 6 | 0.18 | 6.4e-27 | -13.39 | 14.4 | 4.2e-47 | -0.69 | 1.00 | 0.00 | FALSE |
89 | METSIM | Adipose | GBP3 | 0.39 | 0.36 | lasso | 3 | 0.35 | 2.4e-55 | -6.71 | 6.7 | 1.9e-11 | -0.15 | 1.00 | 0.00 | FALSE |
90 | NTR | Blood | GBP3 | 0.13 | 0.10 | lasso | 7 | 0.10 | 1.4e-29 | -6.95 | 6.8 | 9.4e-12 | -0.12 | 1.00 | 0.00 | FALSE |
91 | ROSMAP | Brain Pre-frontal Cortex | GBP3 | 0.40 | 0.41 | lasso | 4 | 0.41 | 2.0e-56 | -6.56 | 6.9 | 4.3e-12 | -0.15 | 1.00 | 0.00 | FALSE |
92 | ROSMAP | Brain Pre-frontal Cortex | CCBL2 | 0.43 | 0.56 | enet | 31 | 0.56 | 1.1e-87 | -13.39 | 14.6 | 4.4e-48 | -0.70 | 1.00 | 0.00 | FALSE |
93 | ROSMAP | Brain Pre-frontal Cortex | RBMXL1 | 0.05 | 0.05 | lasso | 3 | 0.04 | 4.4e-06 | -8.35 | 9.1 | 1.1e-19 | -0.19 | 0.97 | 0.00 | FALSE |
94 | YFS | Blood | CCBL2 | 0.10 | 0.05 | bslmm | 366 | 0.08 | 2.8e-26 | -13.46 | 11.8 | 4.4e-32 | -0.41 | 1.00 | 0.00 | FALSE |
95 | YFS | Blood | GBP1 | 0.02 | 0.01 | bslmm | 349 | 0.01 | 1.4e-04 | -1.00 | -7.0 | 2.4e-12 | 0.41 | 0.46 | 0.46 | FALSE |
96 | YFS | Blood | GBP3 | 0.42 | 0.43 | lasso | 5 | 0.43 | 3.8e-156 | -6.71 | 6.9 | 5.9e-12 | -0.14 | 1.00 | 0.00 | FALSE |
97 | YFS | Blood | GBP4 | 0.06 | 0.03 | enet | 25 | 0.05 | 2.1e-16 | -5.96 | 6.0 | 2.5e-09 | -0.14 | 1.00 | 0.00 | FALSE |
98 | YFS | Blood | GTF2B | 0.01 | 0.00 | lasso | 3 | 0.01 | 2.3e-04 | -14.85 | -13.6 | 2.6e-42 | 0.72 | 0.22 | 0.26 | FALSE |
99 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CCBL2 | 0.14 | 0.09 | enet | 12 | 0.10 | 1.5e-08 | -13.17 | 12.7 | 1.1e-36 | -0.58 | 1.00 | 0.00 | FALSE |
100 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | GBP3 | 0.40 | 0.31 | lasso | 4 | 0.30 | 1.7e-25 | -6.56 | 6.3 | 2.7e-10 | -0.14 | 1.00 | 0.00 | FALSE |
101 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | GBP7 | 0.31 | 0.13 | lasso | 5 | 0.11 | 1.4e-09 | 5.75 | 5.8 | 7.0e-09 | -0.14 | 0.01 | 0.99 | FALSE |
102 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CCBL2 | 0.20 | 0.36 | lasso | 5 | 0.36 | 1.7e-78 | -13.24 | 13.4 | 1.0e-40 | -0.65 | 1.00 | 0.00 | FALSE |
103 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GBP3 | 0.44 | 0.42 | enet | 9 | 0.43 | 2.3e-97 | -6.56 | 6.2 | 4.4e-10 | -0.14 | 1.00 | 0.00 | TRUE |
104 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GBP7 | 0.09 | 0.09 | lasso | 4 | 0.08 | 7.9e-17 | 5.65 | 5.5 | 4.5e-08 | -0.11 | 0.02 | 0.98 | FALSE |
105 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PKN2 | 0.02 | 0.01 | enet | 5 | 0.01 | 2.3e-03 | -13.78 | -13.5 | 8.9e-42 | 0.76 | 0.09 | 0.17 | FALSE |
106 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | CCBL2 | 0.09 | 0.08 | blup | 61 | 0.07 | 3.6e-04 | -13.27 | 11.9 | 2.0e-32 | -0.58 | 0.29 | 0.59 | FALSE |
107 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | GBP3 | 0.30 | 0.23 | lasso | 3 | 0.23 | 1.0e-11 | -6.71 | 5.4 | 5.5e-08 | -0.13 | 1.00 | 0.00 | FALSE |
108 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | GBP7 | 0.15 | 0.05 | blup | 52 | 0.10 | 1.6e-05 | 5.65 | 5.4 | 6.4e-08 | -0.12 | 0.01 | 0.96 | FALSE |
109 | The Cancer Genome Atlas | Colon Adenocarcinoma | CCBL2 | 0.23 | 0.28 | lasso | 3 | 0.26 | 3.9e-15 | -13.27 | 12.6 | 3.3e-36 | -0.61 | 1.00 | 0.00 | FALSE |
110 | The Cancer Genome Atlas | Colon Adenocarcinoma | GBP3 | 0.57 | 0.44 | lasso | 7 | 0.45 | 3.6e-28 | -6.71 | 6.2 | 4.2e-10 | -0.14 | 1.00 | 0.00 | FALSE |
111 | The Cancer Genome Atlas | Colon Adenocarcinoma | GBP7 | 0.26 | 0.16 | enet | 10 | 0.15 | 3.5e-09 | 5.60 | 5.3 | 1.1e-07 | -0.09 | 0.07 | 0.93 | FALSE |
112 | The Cancer Genome Atlas | Esophageal Carcinoma | GBP3 | 0.38 | 0.22 | enet | 7 | 0.20 | 5.7e-07 | -6.71 | 6.8 | 1.0e-11 | -0.14 | 0.86 | 0.01 | FALSE |
113 | The Cancer Genome Atlas | Glioblastoma Multiforme | CCBL2 | 0.36 | 0.32 | enet | 37 | 0.33 | 6.4e-11 | -13.25 | 14.2 | 8.5e-46 | -0.65 | 0.23 | 0.77 | FALSE |
114 | The Cancer Genome Atlas | Glioblastoma Multiforme | GBP3 | 0.50 | 0.30 | lasso | 5 | 0.35 | 1.7e-11 | -6.71 | 7.8 | 4.1e-15 | -0.13 | 1.00 | 0.00 | FALSE |
115 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CCBL2 | 0.07 | 0.06 | lasso | 2 | 0.05 | 1.2e-06 | -13.27 | 13.1 | 2.6e-39 | -0.59 | 0.34 | 0.64 | FALSE |
116 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | GBP3 | 0.44 | 0.33 | lasso | 5 | 0.33 | 8.9e-38 | -6.71 | 6.2 | 4.7e-10 | -0.14 | 1.00 | 0.00 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CCBL2 | 0.37 | 0.48 | enet | 20 | 0.50 | 1.5e-63 | -13.24 | 13.7 | 9.6e-43 | -0.62 | 1.00 | 0.00 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | GBP3 | 0.62 | 0.50 | lasso | 2 | 0.49 | 2.2e-63 | -6.71 | 6.5 | 1.2e-10 | -0.14 | 1.00 | 0.00 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CCBL2 | 0.28 | 0.42 | enet | 15 | 0.40 | 1.5e-24 | -13.27 | 13.6 | 2.4e-42 | -0.64 | 1.00 | 0.00 | FALSE |
120 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | GBP3 | 0.55 | 0.37 | lasso | 3 | 0.36 | 3.2e-21 | -6.71 | 6.7 | 2.2e-11 | -0.15 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CCBL2 | 0.28 | 0.32 | enet | 24 | 0.31 | 2.5e-35 | -13.33 | 13.4 | 4.6e-41 | -0.64 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GBP3 | 0.43 | 0.34 | lasso | 4 | 0.35 | 5.8e-41 | -6.56 | 7.5 | 6.0e-14 | -0.15 | 1.00 | 0.00 | FALSE |
123 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GBP4 | 0.05 | 0.05 | lasso | 2 | 0.04 | 1.1e-05 | 5.60 | 5.6 | 2.1e-08 | -0.09 | 0.03 | 0.96 | FALSE |
124 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GBP7 | 0.06 | 0.08 | enet | 4 | 0.06 | 1.1e-07 | 6.25 | 6.1 | 1.1e-09 | -0.12 | 0.01 | 0.99 | FALSE |
125 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PKN2 | 0.05 | 0.01 | enet | 8 | 0.02 | 1.6e-03 | -15.81 | -14.7 | 1.0e-48 | 0.80 | 0.08 | 0.86 | FALSE |
126 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | GBP3 | 0.40 | 0.29 | lasso | 5 | 0.26 | 1.3e-12 | -6.71 | 6.2 | 6.8e-10 | -0.14 | 1.00 | 0.00 | FALSE |
127 | The Cancer Genome Atlas | Lung Adenocarcinoma | CCBL2 | 0.09 | 0.12 | enet | 10 | 0.11 | 8.7e-13 | -13.27 | 12.7 | 6.5e-37 | -0.61 | 1.00 | 0.00 | FALSE |
128 | The Cancer Genome Atlas | Lung Adenocarcinoma | GBP3 | 0.46 | 0.37 | lasso | 4 | 0.37 | 1.4e-45 | -6.56 | 6.3 | 2.6e-10 | -0.13 | 1.00 | 0.00 | FALSE |
129 | The Cancer Genome Atlas | Lung Adenocarcinoma | GBP7 | 0.26 | 0.22 | lasso | 7 | 0.21 | 1.8e-24 | 5.60 | 5.5 | 4.5e-08 | -0.09 | 0.30 | 0.70 | FALSE |
130 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CCBL2 | 0.10 | 0.07 | enet | 12 | 0.08 | 2.0e-09 | -13.46 | 12.6 | 3.9e-36 | -0.59 | 0.97 | 0.02 | FALSE |
131 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | GBP3 | 0.35 | 0.42 | lasso | 5 | 0.42 | 1.3e-51 | -6.56 | 6.3 | 3.4e-10 | -0.14 | 1.00 | 0.00 | FALSE |
132 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | GBP7 | 0.16 | 0.10 | blup | 52 | 0.12 | 4.2e-13 | 5.75 | 5.7 | 1.1e-08 | -0.10 | 0.06 | 0.94 | FALSE |
133 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CCBL2 | 0.14 | 0.13 | enet | 15 | 0.12 | 9.7e-09 | -13.24 | 11.3 | 2.0e-29 | -0.55 | 1.00 | 0.00 | FALSE |
134 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | GBP3 | 0.50 | 0.47 | lasso | 3 | 0.48 | 2.9e-36 | -6.71 | 7.7 | 1.1e-14 | -0.20 | 1.00 | 0.00 | FALSE |
135 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CCBL2 | 0.15 | 0.18 | lasso | 2 | 0.16 | 3.5e-07 | -13.87 | 13.9 | 9.5e-44 | -0.69 | 0.52 | 0.45 | FALSE |
136 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | GBP3 | 0.62 | 0.28 | lasso | 5 | 0.26 | 2.6e-11 | -6.95 | 7.2 | 5.1e-13 | -0.14 | 1.00 | 0.00 | FALSE |
137 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | GBP7 | 0.35 | 0.15 | lasso | 2 | 0.14 | 2.4e-06 | 5.60 | 5.2 | 1.7e-07 | -0.11 | 0.06 | 0.89 | TRUE |
138 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CCBL2 | 0.37 | 0.47 | enet | 19 | 0.46 | 3.1e-20 | -13.46 | 13.7 | 5.5e-43 | -0.67 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | GBP3 | 0.61 | 0.56 | lasso | 4 | 0.56 | 1.2e-26 | -6.71 | 7.1 | 1.1e-12 | -0.15 | 1.00 | 0.00 | FALSE |
140 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | GBP7 | 0.19 | 0.06 | enet | 16 | 0.11 | 4.4e-05 | -5.93 | 5.2 | 1.7e-07 | 0.01 | 0.03 | 0.92 | FALSE |
141 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCBL2 | 0.20 | 0.34 | lasso | 2 | 0.35 | 9.5e-38 | -13.46 | 13.4 | 5.3e-41 | -0.65 | 1.00 | 0.00 | FALSE |
142 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GBP3 | 0.51 | 0.30 | lasso | 3 | 0.29 | 8.0e-31 | -6.56 | 6.7 | 2.0e-11 | -0.15 | 1.00 | 0.00 | FALSE |
143 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CCBL2 | 0.35 | 0.27 | lasso | 6 | 0.25 | 1.7e-06 | -13.46 | 13.8 | 2.0e-43 | -0.68 | 0.33 | 0.58 | FALSE |
144 | The Cancer Genome Atlas | Rectum Adenocarcinoma | GBP3 | 0.48 | 0.17 | lasso | 2 | 0.14 | 3.2e-04 | -6.71 | 6.7 | 2.0e-11 | -0.15 | 0.03 | 0.07 | FALSE |
145 | The Cancer Genome Atlas | Rectum Adenocarcinoma | GBP7 | 0.11 | 0.12 | lasso | 4 | 0.10 | 2.3e-03 | 6.41 | 6.4 | 1.5e-10 | -0.13 | 0.01 | 0.63 | TRUE |
146 | The Cancer Genome Atlas | Soft Tissue Sarcoma | CCBL2 | 0.28 | 0.32 | enet | 21 | 0.32 | 8.7e-20 | -13.27 | 13.8 | 2.5e-43 | -0.66 | 1.00 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Soft Tissue Sarcoma | GBP3 | 0.26 | 0.20 | lasso | 7 | 0.18 | 1.0e-10 | -6.95 | 7.2 | 7.5e-13 | -0.13 | 1.00 | 0.00 | FALSE |
148 | The Cancer Genome Atlas | Soft Tissue Sarcoma | GBP7 | 0.06 | 0.04 | blup | 52 | 0.06 | 2.5e-04 | 5.65 | 6.6 | 4.6e-11 | -0.12 | 0.02 | 0.88 | FALSE |
149 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | CCBL2 | 0.24 | 0.20 | enet | 12 | 0.17 | 2.7e-05 | -13.33 | 13.1 | 5.3e-39 | -0.63 | 0.31 | 0.18 | FALSE |
150 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | GBP3 | 0.35 | 0.13 | blup | 43 | 0.12 | 4.2e-04 | -6.71 | 8.9 | 6.3e-19 | -0.27 | 0.08 | 0.07 | FALSE |
151 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CCBL2 | 0.11 | 0.13 | enet | 14 | 0.11 | 1.7e-08 | -13.25 | 13.4 | 8.9e-41 | -0.64 | 0.96 | 0.04 | FALSE |
152 | The Cancer Genome Atlas | Stomach Adenocarcinoma | GBP3 | 0.49 | 0.34 | enet | 11 | 0.33 | 1.2e-24 | -6.71 | 6.8 | 1.4e-11 | -0.13 | 1.00 | 0.00 | FALSE |
153 | The Cancer Genome Atlas | Stomach Adenocarcinoma | GBP7 | 0.05 | 0.03 | blup | 52 | 0.00 | 7.2e-01 | 5.75 | 6.3 | 4.0e-10 | -0.12 | 0.01 | 0.82 | FALSE |
154 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CCBL2 | 0.17 | 0.13 | blup | 61 | 0.16 | 2.4e-06 | -13.46 | 9.7 | 2.8e-22 | -0.49 | 0.09 | 0.70 | FALSE |
155 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | GBP3 | 0.64 | 0.34 | lasso | 4 | 0.32 | 8.2e-12 | -6.71 | 7.1 | 1.6e-12 | -0.16 | 1.00 | 0.00 | FALSE |
156 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | GBP7 | 0.29 | 0.19 | enet | 15 | 0.22 | 1.8e-08 | 6.25 | 6.2 | 7.4e-10 | -0.12 | 0.01 | 0.99 | FALSE |
157 | The Cancer Genome Atlas | Thyroid Carcinoma | CCBL2 | 0.45 | 0.64 | enet | 13 | 0.66 | 1.4e-86 | -13.35 | 13.6 | 7.3e-42 | -0.66 | 1.00 | 0.00 | FALSE |
158 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | CCBL2 | 0.20 | 0.22 | enet | 16 | 0.18 | 8.6e-06 | -13.27 | 11.5 | 1.1e-30 | -0.57 | 0.26 | 0.67 | FALSE |
159 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | GBP3 | 0.42 | 0.31 | lasso | 6 | 0.28 | 2.5e-08 | -6.71 | 7.4 | 1.0e-13 | -0.15 | 0.98 | 0.00 | FALSE |