[Hub]/) : Traits : Blood White Count : ← →

chr7:98,244,565-100,652,317

Best TWAS P=3.09e-15 · Best GWAS P=8.43e-17 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
7	GTEx	Lung	ZKSCAN5	0.09	0.05	lasso	2	0.03	2.7e-03	-7.71	7.9	3.1e-15	-0.96	0.04	0.91	TRUE
4	GTEx	Brain Cerebellar Hemisphere	MBLAC1	0.45	0.09	enet	30	0.33	2.6e-09	-0.55	-5.9	2.8e-09	0.09	0.46	0.08	TRUE
5	GTEx	Cells Transformed fibroblasts	CPSF4	0.08	0.03	lasso	4	0.03	1.8e-03	-7.71	-7.8	6.4e-15	0.96	0.02	0.95	FALSE
9	GTEx	Lung	GS1-259H13.2	0.09	0.07	lasso	4	0.05	8.4e-05	-7.65	7.7	1.8e-14	-0.95	0.30	0.64	FALSE
3	GTEx	Adipose Visceral Omentum	GS1-259H13.2	0.23	0.12	lasso	1	0.09	1.8e-05	-7.65	7.7	2.1e-14	-0.95	0.25	0.72	FALSE
6	GTEx	Esophagus Mucosa	GS1-259H13.2	0.07	0.07	lasso	3	0.05	1.7e-04	-7.65	7.6	2.8e-14	-0.95	0.20	0.71	FALSE
15	METSIM	Adipose	GS1-259H13.2	0.04	0.03	lasso	3	0.02	1.4e-03	-7.58	7.6	2.9e-14	-0.93	0.03	0.97	FALSE
10	GTEx	Nerve Tibial	GS1-259H13.2	0.15	0.10	lasso	4	0.09	3.4e-07	-7.65	7.6	3.3e-14	-0.94	0.33	0.67	FALSE
2	CommonMind	Brain Pre-frontal Cortex	LOC100289187	0.08	0.02	enet	14	0.03	4.5e-05	-7.71	7.2	8.3e-13	-0.87	0.01	0.99	FALSE
12	GTEx	Thyroid	ARPC1A	0.11	0.03	lasso	5	0.06	4.6e-05	-4.55	-7.1	1.3e-12	0.88	0.33	0.64	FALSE
16	ROSMAP	Brain Pre-frontal Cortex	GS1-259H13.2	0.07	0.05	bslmm	305	0.06	6.9e-08	-6.22	6.9	4.8e-12	-0.89	0.04	0.96	FALSE
18	The Cancer Genome Atlas	Brain Lower Grade Glioma	ZKSCAN5	0.03	0.04	lasso	2	0.03	1.0e-04	-6.48	-6.5	9.0e-11	0.81	0.47	0.34	FALSE
17	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	ZNF789	0.09	0.00	blup	25	0.05	1.4e-03	-7.71	-6.1	1.3e-09	0.86	0.01	0.51	FALSE
20	The Cancer Genome Atlas	Thyroid Carcinoma	ARPC1B	0.06	0.07	lasso	2	0.06	2.0e-06	-6.00	-5.9	2.9e-09	0.65	0.87	0.10	FALSE
1	CommonMind	Brain Pre-frontal Cortex	CPSF4	0.06	0.06	blup	313	0.07	6.6e-09	-6.47	-5.9	3.1e-09	0.77	0.80	0.20	FALSE
14	METSIM	Adipose	ARPC1A	0.02	0.02	blup	308	0.02	1.6e-03	-6.00	-5.6	2.5e-08	0.69	0.40	0.31	FALSE
11	GTEx	Testis	PILRB	0.23	0.13	enet	31	0.12	5.4e-06	4.52	5.3	1.4e-07	-0.20	0.15	0.80	FALSE
19	The Cancer Genome Atlas	Prostate Adenocarcinoma	POP7	0.11	0.03	enet	10	0.04	3.9e-05	3.98	5.2	1.9e-07	0.00	0.01	0.20	FALSE
8	GTEx	Lung	ZSCAN25	0.15	0.00	enet	25	0.00	4.7e-01	0.61	5.2	2.3e-07	-0.37	0.04	0.13	FALSE
13	GTEx	Thyroid	GS1-259H13.2	0.26	0.05	enet	30	0.08	7.6e-07	-7.58	5.2	2.6e-07	-0.59	0.30	0.68	FALSE