[Hub]/) : Traits : Hair Pigment : ← →

chr2:233,047,291-234,434,621

Best TWAS P=5.17e-10 · Best GWAS P=1.68e-09 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	C2orf82	0.14	0.22	lasso	6	0.23	3.8e-27	-5.9	5.9	3.6e-09	-1.00	0.01	0.99	FALSE
2	GTEx	Brain Caudate basal ganglia	C2orf82	0.27	0.26	lasso	1	0.24	1.2e-07	-6.0	6.0	1.7e-09	-1.00	0.01	0.99	FALSE
3	GTEx	Brain Cerebellum	C2orf82	0.15	0.18	lasso	2	0.13	1.1e-04	-6.0	6.0	2.2e-09	-1.00	0.01	0.97	FALSE
4	GTEx	Brain Cortex	C2orf82	0.17	0.18	lasso	1	0.08	2.8e-03	-6.0	6.0	1.7e-09	-1.00	0.02	0.95	FALSE
5	GTEx	Brain Frontal Cortex BA9	C2orf82	0.24	0.16	lasso	10	0.12	3.9e-04	-5.9	6.2	5.2e-10	-0.97	0.02	0.97	TRUE
6	GTEx	Brain Nucleus accumbens basal ganglia	C2orf82	0.19	0.18	lasso	5	0.14	1.1e-04	-6.0	5.8	9.0e-09	-0.96	0.01	0.97	FALSE
7	GTEx	Brain Putamen basal ganglia	C2orf82	0.28	0.22	lasso	3	0.18	5.3e-05	-6.0	6.2	6.1e-10	-0.98	0.02	0.91	FALSE
8	GTEx	Skin Not Sun Exposed Suprapubic	C2orf82	0.19	0.19	lasso	5	0.20	5.5e-11	-6.0	5.9	3.9e-09	-0.99	0.00	1.00	FALSE
9	GTEx	Skin Sun Exposed Lower leg	C2orf82	0.16	0.14	lasso	4	0.15	1.3e-12	-6.0	6.0	1.5e-09	-0.98	0.00	1.00	FALSE
10	ROSMAP	Brain Pre-frontal Cortex	C2orf82	0.31	0.50	enet	24	0.50	1.3e-73	-5.9	6.1	8.2e-10	-0.99	0.01	0.99	FALSE
11	The Cancer Genome Atlas	Glioblastoma Multiforme	C2orf82	0.20	0.24	lasso	8	0.20	9.1e-07	-5.9	5.9	3.3e-09	-0.99	0.01	0.99	FALSE
12	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	EFHD1	0.11	0.01	blup	70	0.03	1.0e-02	2.0	5.2	2.7e-07	-0.39	0.01	0.53	FALSE
13	The Cancer Genome Atlas	Brain Lower Grade Glioma	C2orf82	0.14	0.20	enet	6	0.19	3.1e-21	-5.9	5.9	3.1e-09	-0.98	0.01	0.99	FALSE
14	The Cancer Genome Atlas	Brain Lower Grade Glioma	NGEF	0.03	0.01	blup	130	0.01	2.0e-02	-5.2	5.4	5.3e-08	-0.91	0.01	0.92	FALSE
15	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	KCNJ13	0.07	0.07	blup	36	0.06	2.4e-03	-5.2	5.5	3.8e-08	-0.78	0.01	0.87	FALSE
16	The Cancer Genome Atlas	Prostate Adenocarcinoma	GIGYF2	0.04	0.00	blup	103	0.02	2.1e-03	-5.9	-6.2	5.8e-10	0.83	0.02	0.90	FALSE