[Hub]/) : Traits : Mean time to correctly identify matches : ← →

chr12:111,154,626-113,517,494

Best TWAS P=3.18e-12 · Best GWAS P=2.06e-11 conditioned to 0.0652

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	ALDH2	0.05	0.11	blup	223	0.10	1.8e-12	-5.0	5.5	4.4e-08	-0.85	0.98	0.02	FALSE
2	CommonMind	Brain Pre-frontal Cortex	ATXN2	0.02	0.03	enet	8	0.02	4.8e-04	-4.9	5.8	6.2e-09	-0.83	0.08	0.89	FALSE
3	GTEx	Adipose Subcutaneous	HECTD4	0.06	0.00	enet	15	0.02	1.0e-02	-5.1	5.6	2.3e-08	-0.64	0.16	0.58	FALSE
4	GTEx	Adipose Subcutaneous	MAPKAPK5-AS1	0.08	0.01	enet	26	0.03	2.1e-03	-6.3	-5.9	3.3e-09	0.92	0.24	0.76	FALSE
5	GTEx	Adipose Subcutaneous	AC003029.1	0.08	0.07	enet	30	0.05	1.2e-04	-5.1	-5.9	3.2e-09	0.88	0.62	0.38	FALSE
6	GTEx	Artery Aorta	AC003029.1	0.07	0.01	lasso	7	0.01	5.4e-02	-6.6	-6.1	9.2e-10	0.91	0.07	0.74	FALSE
7	GTEx	Artery Tibial	ALDH2	0.08	0.09	lasso	2	0.07	2.7e-06	-5.1	5.3	1.1e-07	-0.79	0.86	0.11	FALSE
8	GTEx	Artery Tibial	HECTD4	0.05	0.02	lasso	3	0.01	3.1e-02	6.2	6.5	1.0e-10	-0.58	0.06	0.69	FALSE
9	GTEx	Brain Cerebellar Hemisphere	NAA25	0.11	0.02	enet	10	0.00	2.5e-01	-3.4	-5.7	1.3e-08	0.71	0.08	0.44	FALSE
10	GTEx	Brain Cerebellum	NAA25	0.12	-0.01	lasso	12	0.00	3.0e-01	-3.2	-5.5	2.9e-08	0.73	0.10	0.27	FALSE
11	GTEx	Colon Transverse	MAPKAPK5-AS1	0.16	0.09	lasso	13	0.06	7.1e-04	-5.0	-5.2	2.4e-07	0.80	0.80	0.03	FALSE
12	GTEx	Colon Transverse	AC003029.1	0.15	0.09	lasso	12	0.07	2.1e-04	-5.1	-5.2	2.5e-07	0.80	0.80	0.03	FALSE
13	GTEx	Esophagus Gastroesophageal Junction	AC003029.1	0.06	0.03	lasso	3	0.04	1.9e-02	-5.0	-5.2	1.6e-07	0.80	0.06	0.62	FALSE
14	GTEx	Esophagus Mucosa	ALDH2	0.05	0.06	lasso	6	0.07	1.7e-05	-5.1	5.4	5.3e-08	-0.83	0.45	0.53	FALSE
15	GTEx	Esophagus Muscularis	HECTD4	0.06	0.03	lasso	4	0.02	1.8e-02	-5.1	5.8	7.2e-09	-0.82	0.12	0.80	FALSE
16	GTEx	Lung	ALDH2	0.07	0.01	lasso	10	0.02	5.9e-03	-5.5	5.1	3.0e-07	-0.81	0.25	0.36	FALSE
17	GTEx	Nerve Tibial	HECTD4	0.05	0.01	enet	6	0.01	3.6e-02	-6.3	6.3	2.2e-10	-0.68	0.03	0.92	FALSE
18	GTEx	Nerve Tibial	AC003029.1	0.04	0.00	lasso	23	0.00	4.2e-01	-3.5	-5.1	2.8e-07	0.81	0.12	0.34	FALSE
19	GTEx	Pituitary	RP3-462E2.5	0.15	0.12	lasso	3	0.14	2.3e-04	-5.1	5.9	3.4e-09	-0.91	0.13	0.45	FALSE
20	GTEx	Skin Not Sun Exposed Suprapubic	ALDH2	0.13	0.18	lasso	9	0.16	5.0e-09	-5.0	5.4	6.5e-08	-0.83	0.85	0.15	FALSE
21	GTEx	Skin Not Sun Exposed Suprapubic	MAPKAPK5-AS1	0.04	0.00	enet	30	0.00	7.0e-01	-5.1	-5.4	5.5e-08	0.81	0.17	0.30	FALSE
22	GTEx	Skin Sun Exposed Lower leg	ALDH2	0.10	0.09	enet	13	0.13	6.7e-11	-5.0	6.6	4.3e-11	-0.82	0.55	0.45	FALSE
23	GTEx	Skin Sun Exposed Lower leg	AC003029.1	0.09	0.10	lasso	2	0.10	8.8e-09	-5.2	-5.2	1.9e-07	0.81	0.99	0.01	FALSE
24	GTEx	Stomach	TMEM116	0.13	0.03	lasso	7	0.03	1.6e-02	-3.2	-5.5	4.9e-08	0.77	0.05	0.33	FALSE
25	GTEx	Testis	BRAP	0.06	0.03	enet	13	0.01	8.7e-02	-5.1	-5.5	4.3e-08	0.82	0.25	0.47	FALSE
26	GTEx	Thyroid	BRAP	0.07	0.02	lasso	7	0.03	1.1e-03	-6.3	-6.5	8.9e-11	0.86	0.19	0.70	FALSE
27	GTEx	Thyroid	ALDH2	0.06	0.04	lasso	4	0.05	9.7e-05	-6.6	5.7	1.4e-08	-0.93	0.09	0.90	FALSE
28	GTEx	Thyroid	AC003029.1	0.04	0.05	lasso	3	0.04	8.3e-04	-5.0	-5.2	2.5e-07	0.80	0.44	0.48	FALSE
29	YFS	Blood	SH2B3	0.05	0.01	enet	22	0.02	3.3e-07	-6.3	7.0	3.2e-12	-0.80	0.04	0.96	TRUE
30	The Cancer Genome Atlas	Colon Adenocarcinoma	ALDH2	0.07	0.03	lasso	4	0.06	3.9e-04	-3.5	5.4	6.4e-08	-0.69	0.04	0.72	FALSE
31	The Cancer Genome Atlas	Brain Lower Grade Glioma	ACAD10	0.02	0.02	lasso	3	0.01	7.0e-03	-5.5	-5.6	2.2e-08	0.65	0.02	0.75	FALSE
32	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	ERP29	0.11	0.03	blup	25	0.05	5.0e-03	-5.3	-6.1	8.1e-10	0.79	0.02	0.56	FALSE