[Hub]/) : Traits : Leg fat percentage (left) :

chr20:61,576,647-62,912,463

Best TWAS P=5.22e-13 · Best GWAS P=1.87e-12 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ARFRP1 0.07 0.07 lasso 3 0.06 5.3e-08 -6.5 6.4 2.0e-10 -0.95 0.01 0.99 FALSE
2 GTEx Brain Cortex STMN3 0.25 0.09 lasso 7 0.11 6.8e-04 -4.3 -5.2 2.3e-07 0.71 0.10 0.65 FALSE
3 GTEx Testis RTEL1 0.19 0.06 lasso 5 0.14 8.0e-07 -4.3 -5.6 2.7e-08 0.61 0.16 0.68 FALSE
4 METSIM Adipose TPD52L2 0.03 0.00 bslmm 207 0.02 1.5e-03 4.6 5.8 7.3e-09 -0.68 0.02 0.71 FALSE
5 YFS Blood LIME1 0.12 0.19 enet 15 0.19 5.3e-59 -7.0 -7.2 5.2e-13 0.99 0.00 1.00 TRUE
6 The Cancer Genome Atlas Esophageal Carcinoma GMEB2 0.16 0.04 blup 64 0.05 1.0e-02 2.9 5.7 1.0e-08 -0.49 0.02 0.11 FALSE
7 The Cancer Genome Atlas Brain Lower Grade Glioma LIME1 0.02 0.03 blup 47 0.02 6.2e-03 -4.3 -6.1 1.3e-09 0.82 0.03 0.61 FALSE
8 The Cancer Genome Atlas Lung Adenocarcinoma TNFRSF6B 0.02 0.01 enet 7 0.01 6.9e-03 -4.8 -6.1 1.1e-09 0.92 0.02 0.87 FALSE
9 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TNFRSF6B 0.05 0.02 blup 44 0.03 2.9e-03 -6.7 -6.3 3.2e-10 0.92 0.01 0.70 FALSE
10 The Cancer Genome Atlas Prostate Adenocarcinoma ARFRP1 0.03 0.02 lasso 2 0.02 1.2e-03 -6.5 6.6 5.3e-11 -0.96 0.01 0.96 FALSE
11 The Cancer Genome Atlas Prostate Adenocarcinoma LIME1 0.04 0.05 blup 47 0.05 9.0e-06 -7.0 -7.1 1.4e-12 0.97 0.00 0.99 FALSE
12 The Cancer Genome Atlas Prostate Adenocarcinoma SLC2A4RG 0.05 0.01 blup 48 0.02 2.0e-03 -6.7 5.4 8.2e-08 -0.83 0.01 0.94 FALSE
13 The Cancer Genome Atlas Testicular Germ Cell Tumors LIME1 0.10 0.02 blup 47 0.04 1.5e-02 -6.7 -5.9 2.7e-09 0.90 0.01 0.63 FALSE
14 The Cancer Genome Atlas Thyroid Carcinoma ARFRP1 0.04 0.00 blup 51 0.00 1.3e-01 -7.0 5.5 3.3e-08 -0.80 0.01 0.67 FALSE