[Hub]/) : Traits : Trunk fat percentage : ← →

chr12:120,044,549-125,270,773

Best TWAS P=2.67e-36 · Best GWAS P=4.99e-24 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	CCDC92	0.09	0.01	bslmm	438	0.03	3.1e-04	8.8	-5.2	1.5e-07	-0.67	0.11	0.86	TRUE
2	CommonMind	Brain Pre-frontal Cortex	HIP1R	0.06	0.02	lasso	6	0.04	1.9e-05	-4.7	-5.2	2.1e-07	0.01	0.18	0.02	FALSE
3	GTEx	Adipose Subcutaneous	CCDC92	0.23	0.04	enet	27	0.16	6.9e-13	-7.6	11.6	3.9e-31	0.48	0.17	0.83	FALSE
4	GTEx	Adipose Subcutaneous	RP11-380L11.3	0.09	0.03	lasso	3	0.03	1.4e-03	9.7	12.3	8.7e-35	0.87	0.02	0.97	FALSE
5	GTEx	Adipose Subcutaneous	RP11-380L11.4	0.08	0.06	lasso	4	0.04	1.9e-04	6.8	6.3	2.7e-10	0.58	0.14	0.84	FALSE
6	GTEx	Adipose Visceral Omentum	CCDC92	0.19	0.02	lasso	8	0.09	3.3e-05	9.8	12.5	7.1e-36	0.63	0.05	0.94	FALSE
7	GTEx	Adipose Visceral Omentum	RP11-380L11.3	0.15	0.03	lasso	5	0.01	1.4e-01	8.3	12.6	2.7e-36	0.65	0.04	0.74	TRUE
8	GTEx	Artery Aorta	P2RX4	0.20	0.03	enet	28	0.05	1.6e-03	-3.6	-5.2	2.4e-07	0.04	0.12	0.60	TRUE
9	GTEx	Artery Tibial	SIRT4	0.30	0.14	lasso	8	0.14	4.3e-11	-6.0	-6.0	1.8e-09	-0.04	0.01	0.99	FALSE
10	GTEx	Artery Tibial	RP11-380L11.4	0.14	0.12	lasso	4	0.12	2.2e-09	9.7	9.7	3.1e-22	0.95	0.05	0.95	TRUE
11	GTEx	Artery Tibial	RP11-347I19.8	0.16	0.09	enet	26	0.10	1.7e-08	3.9	-5.4	6.1e-08	0.09	0.99	0.00	FALSE
12	GTEx	Brain Cerebellar Hemisphere	WDR66	0.28	0.05	lasso	8	0.04	3.6e-02	-4.5	-5.7	1.2e-08	-0.03	0.08	0.19	FALSE
13	GTEx	Brain Cerebellum	SIRT4	0.48	-0.01	enet	32	0.24	9.2e-08	-6.0	-5.8	9.1e-09	-0.10	0.02	0.88	FALSE
14	GTEx	Brain Putamen basal ganglia	WDR66	0.25	0.01	enet	16	-0.01	5.6e-01	5.9	-6.4	1.8e-10	0.01	0.06	0.23	FALSE
15	GTEx	Breast Mammary Tissue	SIRT4	0.19	0.16	lasso	6	0.16	1.4e-08	-6.0	-5.8	5.1e-09	-0.03	0.01	0.99	FALSE
16	GTEx	Breast Mammary Tissue (Male)	CCDC92	0.06	-0.01	lasso	3	0.00	4.3e-01	8.8	9.2	3.9e-20	0.85	0.04	0.14	FALSE
17	GTEx	Breast Mammary Tissue (Female)	KDM2B	0.13	0.00	lasso	3	0.01	1.2e-01	-4.3	5.8	6.4e-09	0.10	0.04	0.30	TRUE
18	GTEx	Breast Mammary Tissue (Female)	SIRT4	0.03	0.03	lasso	1	0.05	1.0e-02	-5.7	-5.7	1.3e-08	-0.05	0.02	0.63	FALSE
19	GTEx	Breast Mammary Tissue (Female)	CCDC92	0.05	-0.01	enet	2	-0.01	6.2e-01	8.8	8.8	1.9e-18	0.89	0.04	0.24	TRUE
20	GTEx	Breast Mammary Tissue (Female)	C12orf65	0.06	0.00	enet	13	-0.01	6.5e-01	-3.7	-5.5	4.5e-08	-0.08	0.04	0.28	FALSE
21	GTEx	Cells Transformed fibroblasts	BCL7A	0.06	0.01	lasso	4	0.01	3.1e-02	5.4	-8.4	2.9e-17	-0.04	0.09	0.05	TRUE
22	GTEx	Cells Transformed fibroblasts	CCDC92	0.09	0.00	enet	28	0.01	3.8e-02	7.6	6.3	3.0e-10	0.40	0.07	0.24	FALSE
23	GTEx	Colon Sigmoid	RP11-380L11.4	0.21	0.12	lasso	3	0.08	1.1e-03	9.7	9.8	6.9e-23	0.91	0.05	0.87	FALSE
24	GTEx	Colon Transverse	MLXIP	0.20	0.18	enet	23	0.14	5.8e-07	5.9	5.8	7.3e-09	-0.08	1.00	0.00	FALSE
25	GTEx	Colon Transverse	SNRNP35	0.18	0.02	lasso	8	0.04	6.5e-03	-3.3	6.8	1.2e-11	0.15	0.08	0.07	TRUE
26	GTEx	Esophagus Mucosa	KDM2B	0.11	0.04	enet	22	0.10	4.1e-07	3.5	7.0	2.2e-12	0.04	0.91	0.01	FALSE
27	GTEx	Esophagus Mucosa	CCDC92	0.11	0.02	lasso	4	0.02	1.9e-02	8.9	9.1	1.0e-19	0.89	0.09	0.81	FALSE
28	GTEx	Esophagus Mucosa	HIP1R	0.21	0.05	lasso	5	0.07	1.5e-05	4.5	7.3	3.4e-13	-0.05	0.47	0.26	TRUE
29	GTEx	Esophagus Muscularis	RP11-380L11.4	0.27	0.29	lasso	8	0.27	1.0e-16	9.8	9.8	1.7e-22	0.94	0.05	0.95	FALSE
30	GTEx	Heart Atrial Appendage	CCDC92	0.12	0.11	enet	9	0.11	1.1e-05	7.1	9.3	2.0e-20	0.79	0.06	0.92	FALSE
31	GTEx	Heart Atrial Appendage	RP11-380L11.4	0.18	0.11	lasso	7	0.12	6.5e-06	9.8	10.5	1.3e-25	0.92	0.03	0.96	FALSE
32	GTEx	Heart Left Ventricle	CCDC92	0.26	0.19	lasso	4	0.21	1.9e-11	8.9	10.7	1.5e-26	0.87	0.12	0.88	FALSE
33	GTEx	Lung	SIRT4	0.11	0.06	lasso	8	0.01	3.8e-02	-6.0	-5.9	2.8e-09	-0.03	0.01	0.99	FALSE
34	GTEx	Lung	CCDC92	0.14	0.00	enet	10	0.01	1.1e-01	9.0	9.2	3.7e-20	0.18	0.18	0.11	TRUE
35	GTEx	Lung	RP11-380L11.4	0.07	0.07	lasso	3	0.07	8.2e-06	9.8	9.7	3.1e-22	0.94	0.04	0.96	FALSE
36	GTEx	Muscle Skeletal	RSRC2	0.06	0.03	enet	7	0.04	9.6e-05	-3.0	-5.9	3.9e-09	-0.03	0.25	0.48	FALSE
37	GTEx	Muscle Skeletal	RP11-380L11.4	0.14	0.03	lasso	8	0.03	4.0e-04	9.7	8.3	9.9e-17	0.90	0.02	0.97	FALSE
38	GTEx	Muscle Skeletal	RP11-347I19.8	0.08	0.06	lasso	4	0.06	2.4e-06	3.8	-5.2	2.2e-07	0.07	0.95	0.01	FALSE
39	GTEx	Nerve Tibial	SIRT4	0.23	0.21	lasso	5	0.20	4.6e-14	-5.6	-6.0	1.9e-09	-0.03	0.01	0.99	FALSE
40	GTEx	Nerve Tibial	CCDC92	0.16	0.01	enet	6	0.04	6.7e-04	8.6	10.1	6.1e-24	0.68	0.07	0.64	FALSE
41	GTEx	Nerve Tibial	KNTC1	0.12	0.05	lasso	5	0.05	1.9e-04	-5.7	-6.3	2.6e-10	0.02	0.53	0.03	FALSE
42	GTEx	Pancreas	SIRT4	0.40	0.37	lasso	7	0.37	1.8e-16	-5.7	-6.0	1.6e-09	-0.03	0.01	0.99	TRUE
43	GTEx	Pancreas	RP11-347I19.8	0.12	0.00	enet	13	0.00	2.9e-01	3.9	-5.4	7.1e-08	0.05	0.09	0.11	FALSE
44	GTEx	Prostate	CCDC92	0.31	0.10	enet	42	0.11	9.0e-04	8.8	7.9	2.9e-15	0.48	0.06	0.70	FALSE
45	GTEx	Skin Sun Exposed Lower leg	CCDC92	0.11	0.00	enet	15	0.01	1.0e-01	7.6	6.9	5.7e-12	0.50	0.07	0.44	FALSE
46	GTEx	Skin Sun Exposed Lower leg	AC084018.1	0.29	0.15	enet	22	0.21	3.5e-17	3.9	-5.2	2.5e-07	0.10	1.00	0.00	FALSE
47	GTEx	Skin Sun Exposed Lower leg	RP11-380L11.4	0.04	0.02	enet	15	0.02	1.9e-02	9.9	8.9	6.5e-19	0.83	0.02	0.96	FALSE
48	GTEx	Stomach	SIRT4	0.14	0.14	enet	8	0.09	3.1e-05	-5.7	-5.6	2.8e-08	-0.04	0.01	0.99	FALSE
49	GTEx	Stomach	RP11-347I19.8	0.22	0.09	lasso	7	0.11	4.2e-06	4.1	-5.5	5.1e-08	0.08	0.95	0.01	FALSE
50	GTEx	Thyroid	CCDC92	0.06	0.03	lasso	3	0.02	1.1e-02	9.7	10.9	1.3e-27	0.89	0.04	0.93	FALSE
51	GTEx	Thyroid	ZNF664	0.13	0.06	lasso	11	0.08	6.7e-07	8.8	-9.8	1.1e-22	-0.87	0.07	0.93	FALSE
52	METSIM	Adipose	ABCB9	0.04	0.03	enet	19	0.03	7.7e-05	-4.7	-7.0	2.7e-12	0.12	0.08	0.65	FALSE
53	METSIM	Adipose	CCDC92	0.10	0.01	bslmm	435	0.06	5.5e-10	-4.9	11.3	1.7e-29	0.62	0.17	0.83	FALSE
54	METSIM	Adipose	DNAH10	0.03	0.00	bslmm	475	0.01	3.2e-03	10.1	9.1	6.3e-20	0.66	0.01	0.93	FALSE
55	METSIM	Adipose	MORN3	0.06	0.02	lasso	10	0.04	8.7e-07	6.2	7.2	9.0e-13	0.01	0.02	0.98	FALSE
56	METSIM	Adipose	RP11-214K3.24	0.05	0.03	bslmm	444	0.02	2.7e-04	8.9	10.5	7.0e-26	0.73	0.05	0.91	FALSE
57	METSIM	Adipose	SIRT4	0.06	0.04	enet	20	0.03	6.6e-06	-6.0	-5.2	1.9e-07	-0.05	0.01	0.99	FALSE
58	NTR	Blood	MORN3	0.02	0.01	lasso	4	0.01	1.2e-05	5.7	5.6	2.6e-08	0.02	0.02	0.98	FALSE
59	NTR	Blood	ZNF664	0.02	0.00	bslmm	447	0.01	6.3e-04	-5.2	-6.5	8.1e-11	-0.57	0.02	0.86	FALSE
60	YFS	Blood	MORN3	0.12	0.13	lasso	7	0.15	4.9e-48	6.2	5.9	3.2e-09	0.01	0.02	0.98	FALSE
61	The Cancer Genome Atlas	Breast Invasive Carcinoma	DNAH10	0.11	0.03	blup	99	0.05	8.2e-11	7.0	9.7	4.0e-22	0.71	0.05	0.95	FALSE
62	The Cancer Genome Atlas	Breast Invasive Carcinoma	SIRT4	0.06	0.06	lasso	4	0.05	2.8e-11	-6.0	-5.9	3.3e-09	-0.04	0.00	1.00	FALSE
63	The Cancer Genome Atlas	Colon Adenocarcinoma	LOC338799	0.06	0.03	blup	31	0.05	5.2e-04	4.3	-5.3	9.4e-08	0.09	0.01	0.21	FALSE
64	The Cancer Genome Atlas	Colon Adenocarcinoma	MLXIP	0.06	0.04	lasso	7	0.02	2.7e-02	5.8	5.9	3.4e-09	-0.07	0.02	0.92	FALSE
65	The Cancer Genome Atlas	Glioblastoma Multiforme	CCDC92	0.07	0.02	blup	52	0.04	1.8e-02	8.8	9.2	2.7e-20	0.93	0.02	0.73	FALSE
66	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CCDC92	0.06	0.04	enet	8	0.05	1.7e-06	9.0	6.3	3.2e-10	0.75	0.06	0.91	FALSE
67	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	DNAH10	0.07	0.03	lasso	3	0.05	7.4e-06	9.8	9.4	7.6e-21	0.80	0.02	0.97	FALSE
68	The Cancer Genome Atlas	Lung Adenocarcinoma	LOC338799	0.04	0.02	blup	29	0.04	3.5e-05	4.1	-5.5	5.0e-08	0.07	0.02	0.49	FALSE
69	The Cancer Genome Atlas	Rectum Adenocarcinoma	MLXIP	0.18	0.14	lasso	4	0.13	5.1e-04	5.2	5.6	2.7e-08	-0.08	0.02	0.88	FALSE
70	The Cancer Genome Atlas	Soft Tissue Sarcoma	CCDC92	0.05	0.03	blup	52	0.03	5.8e-03	4.4	7.9	3.4e-15	0.91	0.04	0.63	FALSE
71	The Cancer Genome Atlas	Stomach Adenocarcinoma	MLXIP	0.06	0.02	blup	68	0.04	1.2e-03	5.9	7.3	2.1e-13	-0.03	0.02	0.84	TRUE
72	The Cancer Genome Atlas	Stomach Adenocarcinoma	SIRT4	0.10	0.06	blup	37	0.08	1.3e-06	-5.7	-5.2	1.8e-07	-0.04	0.01	0.99	FALSE
73	The Cancer Genome Atlas	Thyroid Carcinoma	DNAH10	0.04	0.03	lasso	5	0.02	4.6e-03	8.6	9.3	1.9e-20	0.86	0.01	0.88	FALSE
74	The Cancer Genome Atlas	Thyroid Carcinoma	VPS33A	0.06	0.00	enet	8	0.03	9.6e-04	4.5	-5.8	8.6e-09	0.02	0.07	0.92	FALSE
75	The Cancer Genome Atlas	Thyroid Carcinoma	ZNF664	0.06	0.05	enet	9	0.05	2.8e-05	9.7	-9.7	2.3e-22	-0.92	0.03	0.97	FALSE