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chr11:65,353,906-67,192,555

Best TWAS P=5.05e-12 · Best GWAS P=5.5e-12 conditioned to 0.0662

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
3	GTEx	Breast Mammary Tissue	B3GNT1	0.07	0.03	enet	9	0.05	1.6e-03	-5.3	6.9	5.0e-12	-0.78	0.07	0.73	TRUE
13	The Cancer Genome Atlas	Stomach Adenocarcinoma	SNX32	0.12	0.13	blup	60	0.13	1.2e-09	-4.0	-5.1	3.0e-07	0.07	0.01	0.74	TRUE
8	ROSMAP	Brain Pre-frontal Cortex	B3GNT1	0.04	0.02	lasso	2	0.02	1.3e-03	-6.0	6.2	5.4e-10	-0.87	0.03	0.88	FALSE
9	ROSMAP	Brain Pre-frontal Cortex	RIN1	0.03	0.03	enet	5	0.03	1.8e-04	-6.1	-6.2	6.5e-10	0.89	0.02	0.96	FALSE
5	GTEx	Nerve Tibial	B3GNT1	0.07	0.10	lasso	2	0.09	7.1e-07	-6.0	6.1	9.5e-10	-0.86	0.02	0.98	FALSE
10	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CNIH2	0.03	0.00	enet	4	0.02	6.4e-03	5.5	-6.1	1.1e-09	0.57	0.06	0.18	FALSE
7	GTEx	Thyroid	BRMS1	0.05	0.02	lasso	4	0.01	2.6e-02	-5.3	6.0	2.4e-09	-0.61	0.08	0.40	FALSE
12	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	C11orf80	0.03	0.01	blup	30	0.01	4.8e-02	-5.3	5.7	1.4e-08	-0.55	0.01	0.74	FALSE
6	GTEx	Testis	DPP3	0.10	0.06	lasso	4	0.07	5.3e-04	-6.0	-5.5	3.7e-08	0.83	0.05	0.71	FALSE
1	GTEx	Adipose Subcutaneous	CTSF	0.09	0.06	enet	7	0.08	3.6e-07	-5.3	-5.4	5.3e-08	0.56	0.63	0.36	FALSE
2	GTEx	Breast Mammary Tissue	CTSF	0.18	0.10	lasso	6	0.08	6.6e-05	-5.2	-5.4	6.2e-08	0.52	0.33	0.19	FALSE
11	The Cancer Genome Atlas	Brain Lower Grade Glioma	C11orf80	0.05	0.04	lasso	3	0.03	4.6e-04	-5.3	5.4	7.7e-08	-0.56	0.01	0.99	FALSE
14	The Cancer Genome Atlas	Testicular Germ Cell Tumors	NPAS4	0.14	0.14	blup	21	0.11	1.4e-04	-4.6	5.3	9.5e-08	-0.74	0.01	0.87	FALSE
4	GTEx	Lung	SPTBN2	0.07	0.00	lasso	4	0.01	4.3e-02	-3.9	5.2	1.7e-07	-0.48	0.17	0.23	FALSE