[Hub]/) : Traits : Cardiovascular Disease : ← →

chr15:73,774,377-76,108,550

Best TWAS P=1.38e-24 · Best GWAS P=6.35e-24 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
59	YFS	Blood	CSK	0.13	0.15	lasso	11	0.16	6.7e-51	10.0	10.2	1.4e-24	0.94	0.00	1.00	TRUE
24	GTEx	Cells EBV-transformed lymphocytes	ULK3	0.19	0.04	lasso	2	0.08	1.2e-03	8.7	8.7	3.9e-18	0.69	0.24	0.27	TRUE
65	The Cancer Genome Atlas	Breast Invasive Carcinoma	C15orf17	0.02	0.02	lasso	1	0.02	1.9e-05	8.1	-8.1	4.4e-16	-0.63	0.01	0.98	TRUE
22	GTEx	Breast Mammary Tissue (Male)	MPI	0.06	0.01	enet	4	0.03	5.7e-02	4.9	-7.3	4.2e-13	-0.49	0.03	0.08	TRUE
79	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	RPP25	0.05	0.03	blup	23	0.04	3.7e-03	-5.2	7.0	1.8e-12	0.68	0.01	0.74	TRUE
55	METSIM	Adipose	RPP25	0.04	0.06	lasso	7	0.05	1.4e-08	5.5	6.9	6.7e-12	0.77	0.11	0.89	TRUE
91	The Cancer Genome Atlas	Soft Tissue Sarcoma	ULK3	0.04	0.03	blup	49	0.02	3.3e-02	8.4	5.9	2.7e-09	0.44	0.03	0.26	TRUE
84	The Cancer Genome Atlas	Lung Adenocarcinoma	CCDC33	0.05	0.02	blup	93	0.04	4.0e-05	4.3	5.7	1.6e-08	0.33	0.69	0.12	TRUE
52	METSIM	Adipose	ARID3B	0.03	0.03	lasso	3	0.03	5.3e-05	5.5	-5.3	1.2e-07	-0.29	0.55	0.04	TRUE
34	GTEx	Lung	CSK	0.09	0.06	lasso	3	0.05	1.4e-04	9.8	9.9	3.1e-23	0.82	0.09	0.91	FALSE
37	GTEx	Muscle Skeletal	UBL7	0.06	0.02	lasso	6	0.01	3.7e-02	9.4	-9.7	4.8e-22	-0.81	0.03	0.78	FALSE
69	The Cancer Genome Atlas	Breast Invasive Carcinoma	ULK3	0.02	0.02	blup	49	0.02	1.1e-05	8.8	9.6	6.1e-22	0.74	0.10	0.90	FALSE
49	GTEx	Vagina	COX5A	0.38	0.02	lasso	7	0.02	9.3e-02	9.7	-9.6	9.1e-22	-0.72	0.06	0.39	FALSE
13	GTEx	Brain Frontal Cortex BA9	MPI	0.29	0.12	lasso	10	0.19	9.7e-06	8.2	-9.4	4.6e-21	-0.75	0.16	0.80	FALSE
56	METSIM	Adipose	ULK3	0.14	0.14	lasso	10	0.15	3.2e-22	8.8	9.4	5.5e-21	0.82	0.57	0.43	FALSE
6	GTEx	Adipose Visceral Omentum	ULK3	0.13	0.12	enet	8	0.11	3.3e-06	9.4	9.4	6.0e-21	0.76	0.34	0.64	FALSE
62	YFS	Blood	ULK3	0.09	0.11	lasso	6	0.11	1.1e-33	8.8	9.2	2.4e-20	0.75	1.00	0.00	FALSE
77	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	ULK3	0.03	0.03	lasso	3	0.03	5.3e-04	8.7	9.1	6.3e-20	0.74	0.06	0.90	FALSE
98	The Cancer Genome Atlas	Thyroid Carcinoma	ULK3	0.08	0.11	lasso	5	0.10	4.6e-10	8.7	9.1	8.4e-20	0.74	0.29	0.71	FALSE
41	GTEx	Pancreas	ULK3	0.12	0.10	lasso	4	0.07	6.9e-04	8.7	8.9	3.6e-19	0.72	0.32	0.53	FALSE
88	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	ULK3	0.04	0.06	lasso	4	0.04	7.6e-06	8.7	8.9	4.2e-19	0.72	0.06	0.94	FALSE
43	GTEx	Stomach	ULK3	0.16	0.13	lasso	2	0.11	9.7e-06	8.7	8.9	8.0e-19	0.68	0.47	0.48	FALSE
23	GTEx	Breast Mammary Tissue (Female)	ULK3	0.08	0.01	lasso	2	0.01	1.8e-01	8.8	8.8	1.7e-18	0.70	0.05	0.12	FALSE
40	GTEx	Ovary	ULK3	0.19	0.23	lasso	1	0.23	3.0e-06	8.8	8.8	1.7e-18	0.70	0.13	0.24	FALSE
46	GTEx	Thyroid	ULK3	0.11	0.09	lasso	4	0.13	5.9e-10	8.8	8.7	2.7e-18	0.61	0.81	0.19	FALSE
72	The Cancer Genome Atlas	Glioblastoma Multiforme	MPI	0.11	0.03	blup	36	0.02	8.4e-02	8.1	-8.6	5.3e-18	-0.74	0.01	0.73	FALSE
27	GTEx	Cells Transformed fibroblasts	MPI	0.21	0.16	enet	15	0.22	1.1e-16	8.2	-8.6	6.7e-18	-0.71	0.92	0.08	FALSE
78	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	MPI	0.06	0.04	blup	35	0.05	8.5e-04	8.4	-8.6	8.2e-18	-0.73	0.01	0.94	FALSE
9	GTEx	Brain Caudate basal ganglia	MPI	0.23	0.25	lasso	4	0.23	3.1e-07	8.4	-8.6	1.1e-17	-0.72	0.34	0.58	FALSE
60	YFS	Blood	MPI	0.02	0.02	lasso	4	0.03	1.2e-09	8.9	-8.5	1.2e-17	-0.76	0.64	0.36	FALSE
81	The Cancer Genome Atlas	Brain Lower Grade Glioma	SCAMP2	0.18	0.04	enet	5	0.06	6.1e-07	10.0	-8.5	1.9e-17	-0.72	0.00	1.00	FALSE
18	GTEx	Breast Mammary Tissue	ULK3	0.15	0.11	lasso	3	0.09	1.6e-05	8.4	8.5	2.9e-17	0.71	0.62	0.35	FALSE
48	GTEx	Uterus	ULK3	0.40	0.16	lasso	16	0.12	2.2e-03	8.7	8.4	3.9e-17	0.77	0.06	0.62	FALSE
82	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	ULK3	0.10	0.02	blup	49	0.07	2.5e-04	9.4	8.4	4.4e-17	0.63	0.14	0.78	FALSE
15	GTEx	Brain Hippocampus	MPI	0.13	0.07	lasso	3	0.06	1.7e-02	8.8	-8.4	5.8e-17	-0.70	0.06	0.18	FALSE
5	GTEx	Adipose Subcutaneous	CTD-2235H24.2	0.09	0.01	lasso	13	0.01	1.2e-01	8.7	-8.3	7.3e-17	-0.71	0.31	0.17	FALSE
26	GTEx	Cells Transformed fibroblasts	ULK3	0.12	0.04	lasso	5	0.10	8.4e-08	8.7	8.3	9.1e-17	0.73	0.95	0.05	FALSE
71	The Cancer Genome Atlas	Colon Adenocarcinoma	MPI	0.07	0.03	blup	36	0.04	2.1e-03	8.1	-8.3	9.8e-17	-0.74	0.01	0.95	FALSE
44	GTEx	Testis	ULK3	0.15	0.03	enet	24	0.06	1.6e-03	9.3	8.3	1.4e-16	0.55	0.32	0.42	FALSE
95	The Cancer Genome Atlas	Testicular Germ Cell Tumors	MPI	0.12	0.11	lasso	7	0.12	5.3e-05	8.3	-8.2	1.6e-16	-0.67	0.09	0.79	FALSE
83	The Cancer Genome Atlas	Lung Adenocarcinoma	C15orf17	0.02	0.03	lasso	1	0.02	1.5e-03	8.2	-8.2	1.7e-16	-0.64	0.01	0.88	FALSE
80	The Cancer Genome Atlas	Brain Lower Grade Glioma	MPI	0.07	0.09	lasso	4	0.10	2.4e-11	8.3	-8.2	2.2e-16	-0.72	0.02	0.98	FALSE
50	GTEx	Whole Blood	ULK3	0.14	0.06	lasso	5	0.04	8.3e-05	8.8	8.2	2.9e-16	0.64	0.59	0.29	FALSE
1	CommonMind	Brain Pre-frontal Cortex	MPI	0.13	0.11	blup	277	0.14	1.6e-16	8.1	-8.2	3.6e-16	-0.69	1.00	0.00	FALSE
21	GTEx	Breast Mammary Tissue (Male)	ULK3	0.19	0.19	lasso	2	0.15	2.4e-04	8.3	8.1	5.2e-16	0.61	0.07	0.20	FALSE
51	GTEx	Whole Blood	MPI	0.04	0.04	lasso	2	0.01	1.7e-02	8.1	-8.1	6.0e-16	-0.72	0.21	0.15	FALSE
17	GTEx	Brain Putamen basal ganglia	MPI	0.31	0.18	enet	26	0.23	2.9e-06	8.4	-8.0	1.1e-15	-0.74	0.18	0.77	FALSE
73	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	MPI	0.02	0.01	blup	36	0.01	1.2e-02	8.3	-8.0	1.1e-15	-0.72	0.02	0.56	FALSE
7	GTEx	Artery Tibial	ULK3	0.06	0.04	enet	12	0.03	1.7e-03	9.4	8.0	1.2e-15	0.61	0.21	0.23	FALSE
39	GTEx	Nerve Tibial	MPI	0.10	0.12	enet	12	0.15	1.5e-10	5.6	-7.9	2.1e-15	-0.77	0.75	0.25	FALSE
74	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CSK	0.02	0.00	blup	57	0.01	1.8e-02	10.0	7.9	3.1e-15	0.88	0.01	0.87	FALSE
93	The Cancer Genome Atlas	Stomach Adenocarcinoma	MPI	0.04	0.02	blup	36	0.03	1.7e-03	8.3	-7.8	5.1e-15	-0.69	0.11	0.59	FALSE
87	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	MPI	0.04	0.03	blup	36	0.05	8.8e-07	8.1	-7.8	5.3e-15	-0.72	0.06	0.94	FALSE
2	GTEx	Adipose Subcutaneous	ULK3	0.22	0.10	enet	19	0.12	2.9e-10	9.4	7.8	6.1e-15	0.57	0.63	0.37	FALSE
45	GTEx	Testis	MPI	0.09	0.08	enet	12	0.04	6.0e-03	6.2	-7.7	9.3e-15	-0.64	0.19	0.36	FALSE
3	GTEx	Adipose Subcutaneous	FAM219B	0.07	0.01	lasso	6	0.02	1.4e-02	6.0	-7.6	3.0e-14	-0.72	0.33	0.23	FALSE
14	GTEx	Brain Frontal Cortex BA9	ARID3B	0.20	0.13	lasso	6	0.14	2.0e-04	7.5	-7.5	7.5e-14	-0.43	0.15	0.06	FALSE
90	The Cancer Genome Atlas	Prostate Adenocarcinoma	MPI	0.07	0.07	blup	36	0.10	3.3e-10	6.4	-7.4	1.1e-13	-0.67	0.20	0.80	FALSE
97	The Cancer Genome Atlas	Thyroid Carcinoma	MPI	0.13	0.18	enet	10	0.16	3.7e-15	6.3	-7.4	1.8e-13	-0.70	0.97	0.03	FALSE
16	GTEx	Brain Nucleus accumbens basal ganglia	MPI	0.33	0.12	enet	29	0.34	8.6e-10	8.9	-7.3	3.2e-13	-0.65	0.17	0.78	FALSE
11	GTEx	Brain Cerebellum	MPI	0.14	0.09	enet	13	0.09	9.7e-04	-3.8	-7.3	3.3e-13	-0.72	0.16	0.61	FALSE
42	GTEx	Skin Sun Exposed Lower leg	MPI	0.04	0.01	lasso	4	0.02	7.4e-03	5.6	-7.3	3.3e-13	-0.65	0.37	0.40	FALSE
92	The Cancer Genome Atlas	Stomach Adenocarcinoma	COX5A	0.03	0.03	blup	32	0.03	2.9e-03	-5.2	-7.2	5.0e-13	-0.67	0.02	0.63	FALSE
30	GTEx	Esophagus Mucosa	MPI	0.11	0.11	lasso	7	0.10	2.3e-07	6.4	-7.2	5.7e-13	-0.69	0.90	0.09	FALSE
47	GTEx	Thyroid	MPI	0.06	0.07	enet	12	0.07	5.1e-06	6.3	-7.2	8.6e-13	-0.70	0.44	0.56	FALSE
35	GTEx	Lung	CYP11A1	0.10	0.01	enet	21	0.02	9.5e-03	7.1	-7.1	9.0e-13	-0.42	0.27	0.20	FALSE
70	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	ULK3	0.21	0.02	enet	8	0.07	1.9e-04	9.3	7.1	9.2e-13	0.62	0.02	0.61	FALSE
67	The Cancer Genome Atlas	Breast Invasive Carcinoma	RPP25	0.02	0.01	blup	23	0.02	6.8e-05	8.1	7.1	1.7e-12	0.72	0.01	0.98	FALSE
66	The Cancer Genome Atlas	Breast Invasive Carcinoma	MPI	0.04	0.07	enet	13	0.06	5.8e-13	6.4	-7.0	2.4e-12	-0.67	0.97	0.03	FALSE
96	The Cancer Genome Atlas	Thyroid Carcinoma	CSK	0.04	0.04	blup	57	0.04	4.6e-05	9.4	7.0	2.5e-12	0.63	0.08	0.82	FALSE
32	GTEx	Heart Left Ventricle	UBL7	0.06	-0.01	enet	11	0.00	5.5e-01	5.0	-6.9	4.1e-12	-0.71	0.04	0.47	FALSE
63	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	MPI	0.09	0.00	blup	36	0.02	7.9e-03	8.1	-6.9	5.9e-12	-0.70	0.01	0.52	FALSE
4	GTEx	Adipose Subcutaneous	MPI	0.05	0.05	lasso	7	0.04	6.6e-04	6.4	-6.9	6.4e-12	-0.66	0.31	0.22	FALSE
20	GTEx	Breast Mammary Tissue (Male)	PPCDC	0.07	0.00	enet	8	-0.01	7.9e-01	5.0	6.9	6.5e-12	0.71	0.04	0.20	FALSE
86	The Cancer Genome Atlas	Lung Adenocarcinoma	ULK3	0.03	0.00	blup	50	0.00	8.1e-02	8.2	6.7	2.2e-11	0.45	0.04	0.10	FALSE
57	NTR	Blood	SCAMP2	0.01	0.01	blup	290	0.01	1.6e-03	-2.5	-6.7	2.7e-11	-0.64	0.20	0.17	FALSE
89	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	MPI	0.09	0.07	blup	36	0.08	3.9e-06	-6.2	-6.6	3.2e-11	-0.66	0.76	0.22	FALSE
29	GTEx	Esophagus Mucosa	COX5A	0.11	0.02	enet	23	0.03	6.9e-03	8.3	-6.6	3.6e-11	-0.49	0.12	0.14	FALSE
54	METSIM	Adipose	MPI	0.08	0.06	blup	273	0.07	3.1e-11	8.2	-6.5	7.6e-11	-0.64	1.00	0.00	FALSE
12	GTEx	Brain Cortex	MPI	0.13	0.04	enet	27	0.06	9.3e-03	8.7	-6.4	1.2e-10	-0.68	0.09	0.43	FALSE
68	The Cancer Genome Atlas	Breast Invasive Carcinoma	SEMA7A	0.02	0.00	blup	49	0.01	3.2e-03	5.7	-6.4	2.1e-10	-0.29	0.02	0.36	FALSE
10	GTEx	Brain Cerebellum	SCAMP2	0.12	0.01	lasso	8	-0.01	5.9e-01	-6.2	-6.3	3.2e-10	-0.70	0.11	0.32	FALSE
85	The Cancer Genome Atlas	Lung Adenocarcinoma	MPI	0.02	0.02	lasso	1	0.02	4.7e-03	6.3	-6.3	3.5e-10	-0.68	0.06	0.76	FALSE
75	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	MPI	0.04	0.04	enet	2	0.03	7.8e-05	-6.2	-6.3	3.8e-10	-0.67	0.80	0.11	FALSE
94	The Cancer Genome Atlas	Stomach Adenocarcinoma	SCAMP2	0.04	0.05	lasso	2	0.05	2.0e-04	-6.2	-6.2	4.7e-10	-0.67	0.20	0.47	FALSE
8	GTEx	Artery Tibial	MPI	0.08	0.03	lasso	5	0.04	8.3e-04	6.4	-6.1	1.1e-09	-0.64	0.38	0.37	FALSE
58	YFS	Blood	COX5A	0.01	0.01	lasso	3	0.01	1.9e-05	-6.3	-6.1	1.2e-09	-0.64	0.82	0.13	FALSE
36	GTEx	Lung	MPI	0.12	0.08	lasso	5	0.10	8.8e-08	6.3	-6.1	1.3e-09	-0.64	0.99	0.01	FALSE
64	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	ULK3	0.06	0.03	enet	6	0.05	6.2e-05	7.3	6.0	2.0e-09	0.68	0.08	0.50	FALSE
25	GTEx	Cells EBV-transformed lymphocytes	MPI	0.25	0.16	lasso	5	0.15	1.5e-05	6.4	-6.0	2.3e-09	-0.63	0.22	0.05	FALSE
53	METSIM	Adipose	ISLR	0.08	0.01	blup	415	0.05	1.1e-07	2.5	5.9	3.7e-09	0.36	0.07	0.85	FALSE
61	YFS	Blood	SCAMP2	0.04	0.03	blup	287	0.03	6.2e-11	-6.3	-5.9	4.2e-09	-0.58	1.00	0.00	FALSE
19	GTEx	Breast Mammary Tissue	MPI	0.16	0.00	lasso	8	0.01	1.4e-01	5.6	-5.8	8.7e-09	-0.59	0.06	0.24	FALSE
76	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	RPP25	0.04	0.07	lasso	3	0.06	2.2e-07	-5.2	5.6	2.5e-08	0.63	0.96	0.04	FALSE
33	GTEx	Liver	PPCDC	0.26	0.02	lasso	12	0.01	1.4e-01	5.9	5.6	2.7e-08	0.59	0.09	0.19	FALSE
28	GTEx	Esophagus Mucosa	SCAMP2	0.36	0.20	enet	20	0.27	1.8e-18	6.4	-5.5	3.3e-08	-0.52	1.00	0.00	FALSE
38	GTEx	Nerve Tibial	PPCDC	0.30	0.00	enet	16	0.08	2.9e-06	2.4	5.4	5.4e-08	0.55	0.14	0.46	FALSE
31	GTEx	Esophagus Muscularis	MPI	0.06	0.04	lasso	4	0.04	1.9e-03	-5.2	-5.2	2.5e-07	-0.59	0.32	0.28	FALSE