[Hub]/) : Traits : Height :

chr6:157,713,662-161,786,694

Best TWAS P=9.55e-41 · Best GWAS P=6.71e-39 conditioned to 0.00356

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex LPA 0.10 0.02 lasso 5 0.04 3.2e-06 2.44 -6.8 1.0e-11 -0.62 0.04 0.92 TRUE
2 CommonMind Brain Pre-frontal Cortex LPAL2 0.08 0.02 bslmm 575 0.03 2.1e-04 -4.80 6.2 4.8e-10 0.48 0.38 0.05 FALSE
3 CommonMind Brain Pre-frontal Cortex SLC22A3 0.10 0.02 blup 582 0.05 4.4e-07 -9.04 -7.0 2.0e-12 -0.63 0.60 0.39 FALSE
4 CommonMind Brain Pre-frontal Cortex TULP4 0.16 0.08 bslmm 596 0.12 2.9e-14 -9.71 -10.9 1.8e-27 -0.04 0.00 1.00 FALSE
5 GTEx Adipose Visceral Omentum SLC22A3 0.13 0.06 enet 7 0.09 1.3e-05 -8.51 -8.7 3.0e-18 -0.63 0.52 0.47 FALSE
6 GTEx Artery Aorta SNX9 0.14 0.00 lasso 3 0.00 1.9e-01 12.89 9.1 1.0e-19 0.00 0.01 0.97 FALSE
7 GTEx Artery Tibial RP11-288H12.3 0.17 0.01 lasso 8 0.06 2.3e-05 -3.15 -5.6 1.9e-08 -0.37 0.21 0.13 TRUE
8 GTEx Brain Caudate basal ganglia SLC22A3 0.15 0.10 enet 39 0.11 5.6e-04 -11.33 -10.8 3.0e-27 -0.71 0.04 0.90 FALSE
9 GTEx Brain Cerebellar Hemisphere TULP4 0.44 0.37 lasso 12 0.32 4.3e-09 8.04 7.3 3.3e-13 0.00 0.93 0.04 FALSE
10 GTEx Brain Cerebellum TULP4 0.46 0.32 lasso 15 0.28 7.6e-09 6.18 6.1 8.1e-10 -0.02 0.98 0.00 FALSE
11 GTEx Brain Cortex TMEM181 0.32 -0.01 enet 72 0.04 2.8e-02 -0.87 5.9 2.9e-09 -0.06 0.07 0.09 TRUE
12 GTEx Brain Frontal Cortex BA9 SLC22A3 0.26 0.08 lasso 6 0.05 1.5e-02 -5.45 -8.5 2.6e-17 -0.62 0.16 0.56 FALSE
13 GTEx Cells EBV-transformed lymphocytes SERAC1 0.24 0.31 lasso 8 0.30 1.4e-10 -5.88 -6.9 4.4e-12 -0.02 0.92 0.03 TRUE
14 GTEx Colon Transverse SLC22A3 0.18 0.00 enet 11 0.00 5.2e-01 5.92 -6.3 3.8e-10 -0.40 0.09 0.41 FALSE
15 GTEx Esophagus Mucosa SLC22A3 0.19 0.08 enet 47 0.12 1.7e-08 7.92 -11.8 3.9e-32 -0.58 0.67 0.32 TRUE
16 GTEx Muscle Skeletal TULP4 0.08 0.01 enet 20 0.02 1.9e-03 -9.03 6.6 5.2e-11 0.06 0.22 0.39 FALSE
17 GTEx Muscle Skeletal IGF2R 0.34 0.26 lasso 3 0.26 6.8e-26 -5.04 -5.2 2.0e-07 -0.01 1.00 0.00 TRUE
18 GTEx Nerve Tibial SLC22A3 0.20 0.10 lasso 7 0.13 3.2e-09 -8.61 -8.1 4.8e-16 -0.56 0.99 0.00 FALSE
19 GTEx Ovary SLC22A3 0.33 0.29 lasso 6 0.23 2.8e-06 -6.76 -7.4 1.9e-13 -0.65 0.11 0.81 FALSE
20 GTEx Pancreas SLC22A3 0.17 0.04 enet 36 0.04 8.7e-03 7.77 -5.2 1.6e-07 -0.27 0.26 0.09 FALSE
21 GTEx Skin Not Sun Exposed Suprapubic SLC22A3 0.15 0.05 lasso 9 0.05 9.9e-04 -4.42 -8.3 1.1e-16 -0.65 0.24 0.68 FALSE
22 GTEx Skin Sun Exposed Lower leg SLC22A3 0.29 0.14 lasso 10 0.20 3.7e-16 4.71 -7.0 1.8e-12 -0.48 1.00 0.00 FALSE
23 GTEx Small Intestine Terminal Ileum SLC22A3 0.24 0.13 lasso 5 0.10 3.3e-03 5.91 -5.2 1.7e-07 -0.31 0.12 0.07 FALSE
24 GTEx Stomach TULP4 0.25 0.18 lasso 7 0.16 2.6e-08 6.27 6.3 3.8e-10 0.06 1.00 0.00 FALSE
25 GTEx Stomach IGF2R 0.25 0.00 enet 41 0.00 6.6e-01 3.71 -6.0 1.6e-09 -0.28 0.10 0.05 FALSE
26 GTEx Testis SLC22A3 0.19 0.01 lasso 14 0.05 2.6e-03 -12.34 -7.5 6.6e-14 -0.66 0.43 0.52 FALSE
27 GTEx Thyroid TULP4 0.09 0.02 lasso 4 0.03 1.4e-03 12.89 9.4 6.0e-21 0.08 0.01 0.94 FALSE
28 METSIM Adipose SERAC1 0.12 0.09 bslmm 584 0.09 5.5e-14 -4.70 -5.8 4.8e-09 -0.05 1.00 0.00 TRUE
29 ROSMAP Brain Pre-frontal Cortex TULP4 0.07 0.02 lasso 3 0.03 1.2e-04 12.89 -8.1 4.2e-16 0.02 0.00 0.99 FALSE
30 ROSMAP Brain Pre-frontal Cortex SLC22A3 0.14 0.20 lasso 10 0.19 2.4e-24 -8.98 -9.3 1.7e-20 -0.67 1.00 0.00 FALSE
31 The Cancer Genome Atlas Colon Adenocarcinoma SLC22A3 0.17 0.06 lasso 5 0.04 2.8e-03 -4.26 5.6 2.8e-08 0.45 0.07 0.20 FALSE
32 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma TULP4 0.09 0.05 blup 148 0.04 2.0e-05 9.42 -13.4 9.5e-41 0.05 0.67 0.15 TRUE
33 The Cancer Genome Atlas Brain Lower Grade Glioma SERAC1 0.09 0.03 lasso 4 0.02 3.0e-03 -4.70 -5.2 1.6e-07 -0.04 0.01 0.50 FALSE
34 The Cancer Genome Atlas Brain Lower Grade Glioma SLC22A3 0.12 0.07 enet 24 0.07 4.0e-08 -8.91 6.0 2.0e-09 0.32 1.00 0.00 FALSE
35 The Cancer Genome Atlas Brain Lower Grade Glioma TULP4 0.03 0.03 lasso 3 0.02 5.1e-03 8.04 -8.3 9.8e-17 0.01 0.21 0.09 FALSE
36 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma LPAL2 0.07 0.00 blup 74 0.04 1.1e-03 -4.80 9.0 2.3e-19 0.75 0.05 0.46 FALSE