[Hub]/) : Traits : Height : ← →

chr2:84,884,961-87,510,868

Best TWAS P=2.42e-20 · Best GWAS P=4.56e-24 conditioned to 1.86e-05

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	RNF181	0.07	0.02	bslmm	476	0.03	3.4e-04	9.1	8.0	1.2e-15	0.59	0.02	0.92	FALSE
2	GTEx	Adipose Subcutaneous	GGCX	0.16	0.09	lasso	5	0.08	3.1e-07	8.0	7.8	6.8e-15	0.71	0.99	0.00	FALSE
3	GTEx	Adipose Visceral Omentum	GGCX	0.13	0.03	lasso	7	0.03	1.1e-02	7.9	7.1	1.1e-12	0.68	0.32	0.27	FALSE
4	GTEx	Artery Aorta	GGCX	0.23	0.22	lasso	6	0.23	5.5e-13	7.9	8.8	1.8e-18	0.74	0.97	0.03	FALSE
5	GTEx	Artery Tibial	GGCX	0.29	0.22	enet	14	0.24	6.3e-19	7.8	8.3	8.8e-17	0.69	1.00	0.00	FALSE
6	GTEx	Brain Cerebellar Hemisphere	GGCX	0.46	0.41	enet	16	0.48	5.3e-14	6.3	8.1	4.6e-16	0.72	0.98	0.02	FALSE
7	GTEx	Brain Cerebellum	GGCX	0.54	0.30	lasso	10	0.34	6.0e-11	8.0	8.3	7.1e-17	0.75	0.96	0.04	FALSE
8	GTEx	Brain Cortex	GGCX	0.38	0.17	enet	30	0.02	1.1e-01	6.3	7.5	9.5e-14	0.60	0.48	0.18	FALSE
9	GTEx	Brain Nucleus accumbens basal ganglia	GGCX	0.28	0.09	enet	7	0.02	7.6e-02	6.3	7.9	3.0e-15	0.67	0.10	0.25	FALSE
10	GTEx	Breast Mammary Tissue	GGCX	0.14	0.01	lasso	3	0.01	1.0e-01	8.0	8.0	9.3e-16	0.69	0.13	0.11	FALSE
11	GTEx	Breast Mammary Tissue (Male)	GGCX	0.10	0.00	enet	4	0.00	3.3e-01	6.1	7.4	1.3e-13	0.69	0.06	0.09	FALSE
12	GTEx	Cells EBV-transformed lymphocytes	GGCX	0.36	0.31	enet	18	0.29	4.5e-10	6.2	7.8	4.2e-15	0.71	0.99	0.01	FALSE
13	GTEx	Colon Transverse	GGCX	0.26	0.28	lasso	3	0.28	1.4e-13	8.0	8.3	7.5e-17	0.73	0.98	0.02	FALSE
14	GTEx	Esophagus Gastroesophageal Junction	GGCX	0.24	0.16	lasso	6	0.12	4.3e-05	8.1	8.8	1.6e-18	0.74	0.38	0.38	FALSE
15	GTEx	Esophagus Mucosa	GGCX	0.29	0.21	enet	30	0.27	5.8e-18	7.8	7.6	2.8e-14	0.62	1.00	0.00	FALSE
16	GTEx	Esophagus Mucosa	VAMP8	0.41	0.31	lasso	6	0.36	6.6e-25	8.1	-6.9	3.9e-12	-0.66	1.00	0.00	FALSE
17	GTEx	Esophagus Mucosa	TMEM150A	0.10	0.05	enet	5	0.05	3.2e-04	8.0	-8.6	6.2e-18	-0.80	0.06	0.88	FALSE
18	GTEx	Esophagus Muscularis	GGCX	0.14	0.12	lasso	9	0.12	1.1e-07	7.9	8.2	3.6e-16	0.75	0.65	0.35	FALSE
19	GTEx	Esophagus Muscularis	AC015971.2	0.09	0.03	lasso	6	0.05	9.1e-04	-5.6	5.5	4.5e-08	0.02	0.04	0.86	TRUE
20	GTEx	Lung	GGCX	0.17	0.17	lasso	2	0.18	2.3e-13	8.1	8.1	6.9e-16	0.72	1.00	0.00	FALSE
21	GTEx	Muscle Skeletal	GGCX	0.10	0.04	enet	11	0.02	2.7e-03	7.9	9.2	2.4e-20	0.78	0.09	0.90	TRUE
22	GTEx	Muscle Skeletal	USP39	0.18	0.10	lasso	3	0.10	1.1e-09	7.6	-6.9	5.2e-12	-0.63	0.93	0.07	FALSE
23	GTEx	Muscle Skeletal	VAMP5	0.09	0.05	enet	23	0.05	5.7e-06	9.1	-6.7	1.7e-11	-0.66	0.05	0.95	FALSE
24	GTEx	Nerve Tibial	GGCX	0.38	0.30	lasso	7	0.33	6.5e-24	7.8	8.4	5.5e-17	0.72	1.00	0.00	FALSE
25	GTEx	Pancreas	VAMP5	0.29	0.09	enet	4	0.05	3.2e-03	6.5	-7.7	1.3e-14	-0.66	0.02	0.76	FALSE
26	GTEx	Prostate	GGCX	0.31	0.16	lasso	4	0.20	1.0e-05	6.3	5.7	9.3e-09	0.60	0.07	0.67	FALSE
27	GTEx	Skin Not Sun Exposed Suprapubic	GGCX	0.13	0.04	enet	11	0.06	3.9e-04	8.0	9.1	6.3e-20	0.64	0.34	0.15	FALSE
28	GTEx	Skin Sun Exposed Lower leg	GGCX	0.15	0.11	lasso	3	0.18	7.9e-15	8.0	8.4	4.1e-17	0.69	1.00	0.00	FALSE
29	GTEx	Skin Sun Exposed Lower leg	VAMP8	0.14	0.13	enet	19	0.13	5.4e-11	4.0	-5.7	1.1e-08	-0.49	1.00	0.00	FALSE
30	GTEx	Testis	GGCX	0.38	0.36	enet	25	0.40	8.6e-19	8.1	9.0	3.1e-19	0.72	0.83	0.17	FALSE
31	GTEx	Thyroid	ELMOD3	0.10	0.01	enet	10	0.02	7.7e-03	-4.7	6.2	7.5e-10	0.28	0.22	0.30	FALSE
32	GTEx	Thyroid	GGCX	0.30	0.17	enet	10	0.23	1.4e-17	8.0	8.9	6.9e-19	0.74	0.99	0.01	FALSE
33	GTEx	Whole Blood	CAPG	0.12	0.03	lasso	3	0.04	5.3e-05	4.8	-5.8	7.1e-09	-0.02	0.35	0.04	FALSE
34	GTEx	Whole Blood	GGCX	0.15	0.14	lasso	4	0.15	1.7e-13	8.0	8.4	3.5e-17	0.73	1.00	0.00	FALSE
35	METSIM	Adipose	GGCX	0.07	0.09	lasso	8	0.09	9.6e-14	6.1	7.2	5.7e-13	0.70	0.98	0.02	FALSE
36	METSIM	Adipose	VAMP5	0.05	0.03	lasso	8	0.01	2.9e-03	6.9	-7.8	5.7e-15	-0.71	0.29	0.70	FALSE
37	NTR	Blood	CAPG	0.11	0.05	bslmm	463	0.10	3.7e-29	-4.7	-5.5	2.9e-08	-0.14	1.00	0.00	FALSE
38	NTR	Blood	VAMP8	0.05	0.04	lasso	8	0.04	2.0e-12	7.4	-7.6	2.5e-14	-0.74	1.00	0.00	FALSE
39	ROSMAP	Brain Pre-frontal Cortex	GGCX	0.12	0.10	lasso	4	0.12	5.4e-15	6.8	6.3	3.5e-10	0.60	1.00	0.00	FALSE
40	ROSMAP	Brain Pre-frontal Cortex	USP39	0.34	0.31	enet	9	0.33	4.0e-43	6.7	-5.2	1.5e-07	-0.50	1.00	0.00	FALSE
41	ROSMAP	Brain Pre-frontal Cortex	VAMP5	0.09	0.01	enet	15	0.02	6.2e-04	1.3	-6.5	7.4e-11	-0.35	0.12	0.40	FALSE
42	YFS	Blood	CAPG	0.40	0.20	enet	65	0.37	1.2e-128	-4.7	-5.3	1.1e-07	-0.02	1.00	0.00	TRUE
43	YFS	Blood	VAMP8	0.15	0.15	enet	37	0.18	2.2e-55	7.8	-7.7	1.7e-14	-0.75	1.00	0.00	FALSE
44	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	USP39	0.04	0.00	blup	68	0.01	1.8e-02	7.0	-8.0	8.8e-16	-0.78	0.01	0.78	FALSE
45	The Cancer Genome Atlas	Breast Invasive Carcinoma	SFTPB	0.03	0.02	blup	44	0.02	3.8e-05	7.6	-5.8	5.7e-09	-0.55	0.29	0.55	FALSE
46	The Cancer Genome Atlas	Breast Invasive Carcinoma	USP39	0.02	0.00	blup	67	0.01	1.7e-03	10.1	-8.1	7.4e-16	-0.78	0.01	0.92	FALSE
47	The Cancer Genome Atlas	Colon Adenocarcinoma	C2orf68	0.06	0.06	lasso	2	0.05	1.1e-03	9.1	-9.2	5.9e-20	-0.88	0.02	0.68	FALSE
48	The Cancer Genome Atlas	Brain Lower Grade Glioma	GGCX	0.05	0.05	lasso	1	0.04	1.2e-05	8.1	8.1	5.1e-16	0.72	0.77	0.06	FALSE
49	The Cancer Genome Atlas	Brain Lower Grade Glioma	USP39	0.07	0.05	lasso	5	0.05	5.2e-06	7.0	-5.3	1.3e-07	-0.51	0.90	0.04	FALSE
50	The Cancer Genome Atlas	Brain Lower Grade Glioma	VAMP5	0.06	0.04	lasso	2	0.04	3.2e-05	6.2	-5.8	6.2e-09	-0.63	0.15	0.71	FALSE
51	The Cancer Genome Atlas	Brain Lower Grade Glioma	VPS24	0.05	0.02	enet	12	0.03	2.9e-04	-5.5	5.4	7.9e-08	0.04	0.02	0.91	FALSE
52	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	RNF103	0.06	0.02	blup	42	0.02	2.4e-02	4.9	-5.4	8.0e-08	-0.03	0.01	0.61	FALSE
53	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	USP39	0.10	0.07	blup	62	0.04	7.1e-03	6.9	-7.3	2.4e-13	-0.60	0.04	0.31	FALSE
54	The Cancer Genome Atlas	Lung Adenocarcinoma	RNF181	0.03	0.00	blup	39	0.01	1.5e-02	7.6	-6.7	2.8e-11	-0.67	0.01	0.52	FALSE
55	The Cancer Genome Atlas	Lung Adenocarcinoma	USP39	0.04	0.02	blup	67	0.03	2.0e-04	8.1	-8.4	6.1e-17	-0.76	0.07	0.83	FALSE
56	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	VAMP5	0.07	0.04	blup	44	0.05	2.1e-06	6.5	-5.9	3.1e-09	-0.49	0.33	0.40	FALSE
57	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	RETSAT	0.12	0.01	blup	56	0.03	4.9e-03	-4.6	5.3	1.2e-07	0.05	0.01	0.25	FALSE
58	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	VAMP8	0.06	0.01	enet	15	0.02	2.1e-02	6.3	6.0	1.7e-09	0.45	0.05	0.09	FALSE
59	The Cancer Genome Atlas	Prostate Adenocarcinoma	GGCX	0.04	0.02	blup	44	0.02	2.7e-03	6.4	8.4	6.4e-17	0.72	0.18	0.53	FALSE
60	The Cancer Genome Atlas	Prostate Adenocarcinoma	TMEM150A	0.06	0.05	lasso	3	0.04	3.9e-05	7.6	-7.6	2.6e-14	-0.70	0.47	0.35	FALSE
61	The Cancer Genome Atlas	Prostate Adenocarcinoma	USP39	0.09	0.12	lasso	2	0.11	1.5e-11	6.7	-6.7	2.5e-11	-0.64	1.00	0.00	FALSE
62	The Cancer Genome Atlas	Soft Tissue Sarcoma	GGCX	0.04	0.03	lasso	2	0.03	1.1e-02	7.8	7.8	6.9e-15	0.70	0.06	0.05	FALSE
63	The Cancer Genome Atlas	Thyroid Carcinoma	GGCX	0.03	0.03	enet	5	0.02	8.7e-03	7.2	7.9	3.9e-15	0.82	0.05	0.56	FALSE
64	The Cancer Genome Atlas	Thyroid Carcinoma	VAMP8	0.04	0.05	lasso	3	0.05	1.2e-05	7.8	-8.5	1.3e-17	-0.77	0.36	0.47	FALSE