Best TWAS P=2.11e-85 · Best GWAS P=8.54e-89 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | MRPL53 | 0.09 | 0.12 | enet | 14 | 0.12 | 1.3e-14 | 5.53 | -5.8 | 5.6e-09 | 0.02 | 0.94 | 0.06 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | ZNF638 | 0.06 | 0.01 | bslmm | 559 | 0.02 | 1.8e-03 | 19.97 | 11.7 | 1.9e-31 | 0.69 | 0.01 | 0.96 | FALSE |
3 | GTEx | Adipose Subcutaneous | ZNF638 | 0.09 | 0.02 | lasso | 3 | 0.01 | 2.9e-02 | 8.01 | 8.3 | 1.4e-16 | 0.34 | 0.14 | 0.62 | FALSE |
4 | GTEx | Adipose Subcutaneous | GMCL1 | 0.03 | 0.04 | enet | 5 | 0.02 | 1.0e-02 | -4.84 | -5.6 | 2.4e-08 | -0.06 | 0.52 | 0.12 | FALSE |
5 | GTEx | Adipose Subcutaneous | INO80B | 0.08 | 0.02 | lasso | 5 | 0.03 | 1.5e-03 | 5.75 | -6.5 | 7.1e-11 | 0.00 | 0.54 | 0.06 | FALSE |
6 | GTEx | Adipose Subcutaneous | PAIP2B | 0.14 | 0.06 | enet | 23 | 0.05 | 8.7e-05 | 9.00 | 8.9 | 4.3e-19 | 0.37 | 0.94 | 0.01 | FALSE |
7 | GTEx | Adipose Visceral Omentum | INO80B | 0.21 | 0.04 | lasso | 5 | 0.05 | 1.1e-03 | 5.46 | -5.4 | 5.3e-08 | -0.01 | 0.18 | 0.06 | FALSE |
8 | GTEx | Artery Aorta | ZNF638 | 0.25 | 0.07 | enet | 20 | 0.10 | 5.2e-06 | 19.97 | 19.6 | 2.1e-85 | 0.98 | 0.01 | 0.99 | TRUE |
9 | GTEx | Artery Aorta | PCYOX1 | 0.12 | 0.04 | lasso | 3 | 0.02 | 1.6e-02 | -6.29 | -6.4 | 1.9e-10 | 0.01 | 0.22 | 0.38 | FALSE |
10 | GTEx | Artery Aorta | PAIP2B | 0.09 | 0.02 | lasso | 3 | 0.02 | 3.0e-02 | 9.03 | 9.5 | 2.5e-21 | 0.59 | 0.28 | 0.04 | FALSE |
11 | GTEx | Artery Aorta | GFPT1 | 0.24 | 0.10 | lasso | 8 | 0.19 | 1.0e-10 | -2.71 | 5.3 | 1.0e-07 | -0.11 | 1.00 | 0.00 | FALSE |
12 | GTEx | Artery Aorta | LBX2-AS1 | 0.07 | 0.04 | lasso | 3 | 0.01 | 5.3e-02 | 5.67 | 5.8 | 5.5e-09 | -0.03 | 0.26 | 0.05 | FALSE |
13 | GTEx | Artery Coronary | MOGS | 0.24 | 0.18 | lasso | 8 | 0.12 | 8.7e-05 | 5.73 | 6.7 | 2.6e-11 | -0.03 | 0.53 | 0.17 | FALSE |
14 | GTEx | Artery Tibial | ZNF638 | 0.10 | 0.06 | enet | 13 | 0.07 | 2.4e-06 | 19.95 | 18.5 | 1.6e-76 | 0.88 | 0.01 | 0.99 | FALSE |
15 | GTEx | Artery Tibial | MOGS | 0.15 | 0.10 | lasso | 5 | 0.10 | 5.7e-08 | 5.73 | 5.7 | 1.3e-08 | -0.03 | 0.90 | 0.09 | FALSE |
16 | GTEx | Artery Tibial | PCYOX1 | 0.22 | 0.18 | lasso | 4 | 0.17 | 1.3e-13 | -6.38 | -6.4 | 1.2e-10 | 0.02 | 1.00 | 0.00 | FALSE |
17 | GTEx | Artery Tibial | CNRIP1 | 0.08 | 0.00 | enet | 15 | 0.00 | 1.3e-01 | -0.04 | -5.3 | 9.4e-08 | 0.01 | 0.06 | 0.52 | FALSE |
18 | GTEx | Artery Tibial | PAIP2B | 0.10 | 0.05 | lasso | 5 | 0.05 | 5.5e-05 | 8.92 | 8.9 | 4.8e-19 | 0.37 | 0.87 | 0.00 | FALSE |
19 | GTEx | Artery Tibial | EXOC6B | 0.10 | 0.03 | enet | 9 | 0.02 | 5.0e-03 | 4.72 | -6.3 | 2.6e-10 | 0.03 | 0.36 | 0.02 | FALSE |
20 | GTEx | Artery Tibial | LBX2 | 0.13 | 0.05 | lasso | 8 | 0.05 | 1.4e-04 | 5.56 | 6.1 | 9.3e-10 | -0.03 | 0.67 | 0.22 | FALSE |
21 | GTEx | Artery Tibial | PPP3R1 | 0.25 | 0.22 | lasso | 4 | 0.26 | 5.4e-20 | -10.51 | -11.1 | 1.0e-28 | -0.04 | 0.00 | 1.00 | TRUE |
22 | GTEx | Artery Tibial | LBX2-AS1 | 0.08 | 0.07 | lasso | 4 | 0.04 | 5.4e-04 | 5.58 | 7.2 | 5.1e-13 | -0.01 | 0.38 | 0.39 | TRUE |
23 | GTEx | Artery Tibial | RP11-474G23.2 | 0.17 | 0.14 | lasso | 3 | 0.12 | 2.3e-09 | -10.51 | -11.0 | 2.8e-28 | -0.05 | 0.00 | 1.00 | FALSE |
24 | GTEx | Brain Cerebellum | MOGS | 0.21 | 0.02 | lasso | 6 | 0.07 | 5.0e-03 | 5.58 | 6.3 | 3.3e-10 | -0.02 | 0.42 | 0.06 | FALSE |
25 | GTEx | Brain Cortex | MOGS | 0.15 | 0.07 | lasso | 3 | 0.07 | 4.4e-03 | 5.67 | 5.9 | 3.5e-09 | -0.04 | 0.12 | 0.09 | FALSE |
26 | GTEx | Breast Mammary Tissue (Male) | FNBP1P1 | 0.36 | 0.05 | lasso | 7 | 0.09 | 3.8e-03 | -3.92 | -5.5 | 3.9e-08 | -0.02 | 0.05 | 0.06 | FALSE |
27 | GTEx | Cells EBV-transformed lymphocytes | FAM136A | 0.31 | 0.12 | lasso | 7 | 0.16 | 5.6e-06 | 6.05 | 7.6 | 3.1e-14 | 0.02 | 0.60 | 0.26 | TRUE |
28 | GTEx | Cells Transformed fibroblasts | FAM136A | 0.22 | 0.17 | lasso | 5 | 0.14 | 6.2e-11 | -5.77 | 6.0 | 1.9e-09 | 0.00 | 0.54 | 0.46 | FALSE |
29 | GTEx | Cells Transformed fibroblasts | CCDC142 | 0.07 | 0.00 | enet | 10 | 0.00 | 4.6e-01 | 5.57 | -5.9 | 2.9e-09 | 0.03 | 0.06 | 0.09 | FALSE |
30 | GTEx | Cells Transformed fibroblasts | NFU1 | 0.10 | 0.07 | lasso | 2 | 0.03 | 2.0e-03 | 6.81 | -6.8 | 9.8e-12 | 0.05 | 0.49 | 0.02 | TRUE |
31 | GTEx | Colon Sigmoid | MOGS | 0.32 | 0.21 | lasso | 6 | 0.14 | 1.1e-05 | 5.58 | 5.6 | 2.0e-08 | -0.03 | 0.85 | 0.07 | FALSE |
32 | GTEx | Colon Transverse | MOGS | 0.13 | 0.01 | enet | 14 | 0.05 | 2.6e-03 | 5.37 | 6.8 | 9.6e-12 | -0.06 | 0.32 | 0.07 | FALSE |
33 | GTEx | Colon Transverse | PCYOX1 | 0.13 | 0.01 | lasso | 3 | 0.00 | 2.7e-01 | -6.83 | -7.3 | 3.1e-13 | 0.00 | 0.14 | 0.41 | FALSE |
34 | GTEx | Colon Transverse | LBX2 | 0.11 | 0.13 | enet | 7 | 0.09 | 3.4e-05 | 5.58 | 5.9 | 4.3e-09 | -0.04 | 0.75 | 0.07 | FALSE |
35 | GTEx | Colon Transverse | LBX2-AS1 | 0.09 | 0.05 | lasso | 3 | 0.05 | 1.4e-03 | 5.58 | 5.7 | 1.4e-08 | -0.03 | 0.61 | 0.08 | FALSE |
36 | GTEx | Esophagus Mucosa | INO80B | 0.20 | 0.08 | lasso | 4 | 0.08 | 3.2e-06 | 5.54 | -6.1 | 9.3e-10 | 0.01 | 0.90 | 0.07 | FALSE |
37 | GTEx | Esophagus Mucosa | MOGS | 0.12 | 0.00 | enet | 15 | 0.04 | 1.5e-03 | 5.58 | 5.1 | 2.8e-07 | -0.09 | 0.67 | 0.07 | FALSE |
38 | GTEx | Esophagus Mucosa | LBX2 | 0.28 | 0.20 | lasso | 6 | 0.21 | 6.3e-14 | 5.58 | 5.6 | 1.8e-08 | -0.03 | 0.92 | 0.08 | FALSE |
39 | GTEx | Esophagus Mucosa | DGUOK-AS1 | 0.14 | 0.07 | lasso | 5 | 0.07 | 2.0e-05 | -6.55 | 7.0 | 3.3e-12 | 0.04 | 0.03 | 0.96 | TRUE |
40 | GTEx | Esophagus Mucosa | LBX2-AS1 | 0.26 | 0.21 | lasso | 7 | 0.22 | 1.1e-14 | 5.58 | 5.7 | 1.6e-08 | -0.03 | 0.91 | 0.08 | FALSE |
41 | GTEx | Esophagus Muscularis | PCYOX1 | 0.18 | 0.16 | enet | 14 | 0.15 | 1.9e-09 | -4.77 | -6.1 | 1.2e-09 | -0.02 | 0.85 | 0.15 | FALSE |
42 | GTEx | Esophagus Muscularis | PAIP2B | 0.16 | 0.07 | lasso | 6 | 0.03 | 3.5e-03 | 7.52 | 8.5 | 2.6e-17 | 0.35 | 0.56 | 0.02 | TRUE |
43 | GTEx | Esophagus Muscularis | LBX2 | 0.13 | 0.07 | enet | 5 | 0.07 | 3.2e-05 | 5.73 | 5.2 | 2.1e-07 | -0.04 | 0.79 | 0.07 | FALSE |
44 | GTEx | Esophagus Muscularis | WBP1 | 0.12 | 0.01 | lasso | 1 | 0.00 | 2.0e-01 | 5.57 | -5.6 | 2.6e-08 | 0.04 | 0.10 | 0.06 | FALSE |
45 | GTEx | Heart Atrial Appendage | BOLA3 | 0.33 | 0.08 | lasso | 4 | 0.08 | 1.2e-04 | 4.52 | 6.4 | 1.8e-10 | 0.03 | 0.42 | 0.17 | FALSE |
46 | GTEx | Heart Atrial Appendage | LBX2 | 0.13 | 0.03 | lasso | 3 | 0.02 | 5.5e-02 | 5.58 | 5.2 | 1.6e-07 | -0.02 | 0.13 | 0.05 | FALSE |
47 | GTEx | Heart Atrial Appendage | LBX2-AS1 | 0.11 | 0.05 | lasso | 8 | 0.03 | 1.3e-02 | 5.58 | 5.4 | 5.7e-08 | -0.03 | 0.15 | 0.05 | FALSE |
48 | GTEx | Heart Left Ventricle | FAM136A | 0.17 | 0.09 | enet | 22 | 0.09 | 2.0e-05 | -5.63 | 5.8 | 5.6e-09 | 0.00 | 0.76 | 0.09 | FALSE |
49 | GTEx | Liver | MOGS | 0.23 | -0.01 | enet | 23 | 0.04 | 3.2e-02 | 5.55 | 5.6 | 2.3e-08 | -0.04 | 0.21 | 0.06 | FALSE |
50 | GTEx | Lung | FAM136A | 0.10 | 0.00 | lasso | 3 | 0.00 | 4.3e-01 | -6.37 | 5.5 | 5.0e-08 | -0.02 | 0.06 | 0.04 | FALSE |
51 | GTEx | Lung | PAIP2B | 0.10 | 0.07 | lasso | 8 | 0.06 | 1.7e-05 | 7.18 | 8.3 | 1.1e-16 | 0.35 | 0.95 | 0.00 | FALSE |
52 | GTEx | Lung | LBX2 | 0.22 | 0.24 | enet | 7 | 0.22 | 4.0e-17 | 5.56 | 5.7 | 1.5e-08 | -0.04 | 0.94 | 0.06 | FALSE |
53 | GTEx | Lung | LBX2-AS1 | 0.14 | 0.14 | lasso | 4 | 0.16 | 2.7e-12 | 5.58 | 5.8 | 7.6e-09 | -0.03 | 0.93 | 0.07 | FALSE |
54 | GTEx | Muscle Skeletal | GMCL1 | 0.13 | 0.07 | lasso | 6 | 0.11 | 4.5e-11 | -4.34 | 5.3 | 1.4e-07 | 0.06 | 1.00 | 0.00 | FALSE |
55 | GTEx | Muscle Skeletal | MCEE | 0.10 | 0.06 | enet | 8 | 0.06 | 1.7e-06 | -5.95 | -5.7 | 9.5e-09 | -0.36 | 0.99 | 0.00 | FALSE |
56 | GTEx | Nerve Tibial | PAIP2B | 0.11 | 0.08 | lasso | 7 | 0.07 | 5.5e-06 | 7.30 | 8.1 | 4.3e-16 | 0.36 | 0.93 | 0.02 | FALSE |
57 | GTEx | Nerve Tibial | DYSF | 0.15 | 0.07 | lasso | 4 | 0.09 | 5.2e-07 | 6.34 | 6.5 | 7.1e-11 | 0.04 | 0.99 | 0.00 | FALSE |
58 | GTEx | Nerve Tibial | EXOC6B | 0.15 | 0.03 | lasso | 7 | 0.06 | 3.0e-05 | 5.10 | -6.7 | 2.8e-11 | 0.04 | 0.96 | 0.00 | FALSE |
59 | GTEx | Nerve Tibial | GFPT1 | 0.13 | 0.01 | lasso | 4 | 0.02 | 1.8e-02 | -2.74 | 5.8 | 7.1e-09 | -0.10 | 0.23 | 0.16 | FALSE |
60 | GTEx | Pancreas | NAGK | 0.41 | 0.05 | enet | 57 | 0.12 | 6.1e-06 | -0.11 | 5.2 | 2.0e-07 | 0.24 | 0.37 | 0.05 | FALSE |
61 | GTEx | Pancreas | PAIP2B | 0.18 | 0.03 | lasso | 2 | 0.01 | 1.1e-01 | 8.82 | 9.0 | 2.8e-19 | 0.38 | 0.20 | 0.04 | FALSE |
62 | GTEx | Pancreas | AC022201.5 | 0.14 | -0.01 | lasso | 8 | -0.01 | 6.7e-01 | -6.38 | 5.2 | 1.6e-07 | -0.02 | 0.06 | 0.10 | TRUE |
63 | GTEx | Skin Not Sun Exposed Suprapubic | PAIP2B | 0.15 | 0.00 | lasso | 4 | 0.00 | 1.8e-01 | 7.30 | 5.1 | 2.7e-07 | 0.21 | 0.20 | 0.05 | FALSE |
64 | GTEx | Skin Sun Exposed Lower leg | FAM136A | 0.11 | 0.05 | enet | 42 | 0.06 | 5.1e-06 | -6.37 | 5.3 | 1.3e-07 | 0.02 | 0.44 | 0.45 | TRUE |
65 | GTEx | Skin Sun Exposed Lower leg | INO80B | 0.04 | 0.03 | lasso | 3 | 0.02 | 7.5e-03 | 5.59 | -5.6 | 2.0e-08 | 0.04 | 0.64 | 0.06 | FALSE |
66 | GTEx | Skin Sun Exposed Lower leg | PAIP2B | 0.14 | 0.07 | enet | 39 | 0.07 | 3.0e-06 | 13.75 | 12.1 | 1.8e-33 | 0.66 | 0.34 | 0.62 | TRUE |
67 | GTEx | Small Intestine Terminal Ileum | GFPT1 | 0.24 | 0.01 | enet | 19 | 0.03 | 8.5e-02 | -3.80 | 7.3 | 2.1e-13 | -0.07 | 0.08 | 0.06 | TRUE |
68 | GTEx | Stomach | PAIP2B | 0.14 | 0.13 | lasso | 1 | 0.09 | 2.8e-05 | 7.01 | 7.0 | 2.4e-12 | 0.39 | 0.63 | 0.02 | FALSE |
69 | GTEx | Testis | MCEE | 0.17 | 0.10 | enet | 14 | 0.16 | 2.0e-07 | 5.97 | 7.5 | 4.4e-14 | 0.29 | 0.76 | 0.03 | FALSE |
70 | GTEx | Thyroid | ZNF638 | 0.11 | 0.04 | enet | 13 | 0.06 | 1.3e-05 | 7.68 | 11.1 | 1.5e-28 | 0.66 | 0.08 | 0.91 | FALSE |
71 | GTEx | Thyroid | PAIP2B | 0.11 | 0.06 | lasso | 4 | 0.04 | 5.4e-04 | 7.18 | 8.1 | 5.0e-16 | 0.37 | 0.42 | 0.27 | FALSE |
72 | GTEx | Thyroid | LBX2 | 0.39 | 0.41 | lasso | 3 | 0.40 | 2.3e-32 | 5.58 | 5.7 | 1.4e-08 | -0.03 | 0.91 | 0.09 | FALSE |
73 | GTEx | Thyroid | PCBP1-AS1 | 0.11 | 0.07 | lasso | 3 | 0.07 | 6.6e-06 | -6.25 | 6.2 | 6.7e-10 | 0.00 | 0.83 | 0.02 | FALSE |
74 | GTEx | Thyroid | LBX2-AS1 | 0.38 | 0.35 | lasso | 2 | 0.35 | 2.2e-27 | 5.58 | 5.6 | 2.4e-08 | -0.03 | 0.91 | 0.09 | FALSE |
75 | GTEx | Uterus | LBX2 | 0.26 | 0.09 | lasso | 3 | 0.06 | 2.1e-02 | 5.57 | 5.3 | 1.0e-07 | -0.04 | 0.10 | 0.06 | FALSE |
76 | GTEx | Uterus | LBX2-AS1 | 0.22 | 0.15 | enet | 6 | 0.10 | 4.2e-03 | 5.58 | 5.8 | 6.3e-09 | -0.03 | 0.13 | 0.06 | FALSE |
77 | GTEx | Vagina | LBX2 | 0.20 | 0.28 | lasso | 1 | 0.16 | 1.8e-04 | 5.73 | 5.7 | 1.0e-08 | -0.03 | 0.32 | 0.08 | FALSE |
78 | GTEx | Vagina | LBX2-AS1 | 0.34 | 0.18 | lasso | 4 | 0.12 | 1.3e-03 | 5.73 | 5.6 | 2.0e-08 | -0.03 | 0.13 | 0.06 | FALSE |
79 | GTEx | Whole Blood | CYP26B1 | 0.12 | 0.14 | enet | 13 | 0.16 | 3.2e-14 | 4.20 | 5.2 | 1.8e-07 | -0.05 | 1.00 | 0.00 | FALSE |
80 | GTEx | Whole Blood | LBX2 | 0.12 | 0.12 | lasso | 5 | 0.11 | 1.1e-10 | 5.52 | 5.3 | 9.5e-08 | -0.04 | 0.95 | 0.05 | FALSE |
81 | GTEx | Whole Blood | LBX2-AS1 | 0.16 | 0.18 | lasso | 2 | 0.16 | 6.8e-15 | 5.52 | 5.5 | 3.2e-08 | -0.03 | 0.96 | 0.04 | FALSE |
82 | METSIM | Adipose | ASPRV1 | 0.05 | 0.06 | lasso | 3 | 0.06 | 2.6e-09 | -5.88 | 5.7 | 1.0e-08 | 0.01 | 1.00 | 0.00 | FALSE |
83 | METSIM | Adipose | C2orf81 | 0.02 | 0.02 | bslmm | 374 | 0.01 | 2.5e-02 | 5.57 | 6.0 | 1.7e-09 | -0.05 | 0.48 | 0.04 | FALSE |
84 | METSIM | Adipose | GFPT1 | 0.07 | 0.06 | blup | 460 | 0.08 | 1.0e-11 | -2.71 | 5.2 | 2.4e-07 | -0.09 | 1.00 | 0.00 | FALSE |
85 | METSIM | Adipose | MRPL53 | 0.10 | 0.10 | lasso | 6 | 0.08 | 2.7e-12 | 5.75 | -5.8 | 7.1e-09 | 0.04 | 0.92 | 0.08 | FALSE |
86 | METSIM | Adipose | PAIP2B | 0.05 | 0.03 | lasso | 9 | 0.03 | 5.0e-05 | 13.75 | 13.5 | 1.2e-41 | 0.75 | 0.63 | 0.30 | TRUE |
87 | METSIM | Adipose | PNO1 | 0.10 | 0.12 | enet | 23 | 0.12 | 1.4e-17 | -8.34 | -7.0 | 1.9e-12 | -0.04 | 1.00 | 0.00 | FALSE |
88 | NTR | Blood | CNRIP1 | 0.04 | 0.03 | lasso | 4 | 0.04 | 4.7e-12 | -8.30 | -6.8 | 1.3e-11 | -0.02 | 1.00 | 0.00 | FALSE |
89 | NTR | Blood | CYP26B1 | 0.04 | 0.03 | lasso | 3 | 0.03 | 1.4e-09 | 5.45 | 5.1 | 2.7e-07 | -0.03 | 1.00 | 0.00 | FALSE |
90 | NTR | Blood | PAIP2B | 0.03 | 0.02 | lasso | 5 | 0.01 | 1.2e-04 | -4.35 | -8.0 | 1.1e-15 | -0.38 | 0.89 | 0.02 | TRUE |
91 | ROSMAP | Brain Pre-frontal Cortex | CYP26B1 | 0.04 | 0.02 | blup | 334 | 0.02 | 9.3e-04 | 5.39 | 10.4 | 2.3e-25 | -0.01 | 0.71 | 0.06 | TRUE |
92 | ROSMAP | Brain Pre-frontal Cortex | INO80B | 0.06 | 0.07 | bslmm | 363 | 0.06 | 3.5e-08 | 5.58 | -5.4 | 7.9e-08 | 0.04 | 0.92 | 0.08 | FALSE |
93 | ROSMAP | Brain Pre-frontal Cortex | MOGS | 0.12 | 0.16 | lasso | 6 | 0.16 | 1.1e-19 | 5.73 | 5.8 | 6.7e-09 | -0.03 | 0.90 | 0.10 | FALSE |
94 | ROSMAP | Brain Pre-frontal Cortex | PAIP2B | 0.07 | 0.04 | blup | 342 | 0.04 | 5.6e-06 | 8.98 | 9.3 | 1.8e-20 | 0.31 | 0.94 | 0.00 | TRUE |
95 | ROSMAP | Brain Pre-frontal Cortex | MPHOSPH10 | 0.09 | 0.08 | lasso | 6 | 0.07 | 2.2e-09 | -5.96 | -5.5 | 3.0e-08 | -0.29 | 1.00 | 0.00 | FALSE |
96 | ROSMAP | Brain Pre-frontal Cortex | SNRPG | 0.03 | 0.01 | blup | 225 | 0.02 | 2.7e-03 | 6.05 | 5.8 | 7.3e-09 | 0.02 | 0.18 | 0.35 | FALSE |
97 | ROSMAP | Brain Pre-frontal Cortex | ANKRD53 | 0.03 | 0.01 | enet | 7 | 0.02 | 3.0e-03 | 4.72 | 5.4 | 8.4e-08 | 0.31 | 0.03 | 0.18 | FALSE |
98 | ROSMAP | Brain Pre-frontal Cortex | ANTXR1 | 0.13 | 0.00 | blup | 560 | 0.04 | 2.2e-06 | 2.64 | -5.2 | 1.9e-07 | 0.00 | 0.57 | 0.02 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | PCBP1-AS1 | 0.08 | 0.10 | bslmm | 313 | 0.10 | 1.8e-12 | -5.54 | 5.7 | 1.0e-08 | 0.00 | 1.00 | 0.00 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | WBP1 | 0.04 | 0.02 | bslmm | 362 | 0.04 | 1.6e-05 | 5.68 | -5.7 | 1.0e-08 | 0.04 | 0.88 | 0.07 | FALSE |
101 | YFS | Blood | ASPRV1 | 0.10 | 0.10 | blup | 342 | 0.13 | 7.7e-40 | -6.59 | 6.0 | 1.6e-09 | -0.01 | 1.00 | 0.00 | TRUE |
102 | YFS | Blood | DYSF | 0.02 | 0.01 | blup | 563 | 0.01 | 1.1e-03 | 10.55 | 9.2 | 3.0e-20 | 0.26 | 0.22 | 0.03 | TRUE |
103 | YFS | Blood | MCEE | 0.07 | 0.05 | enet | 23 | 0.06 | 2.5e-19 | -5.95 | -6.8 | 9.7e-12 | -0.41 | 1.00 | 0.00 | FALSE |
104 | YFS | Blood | MRPL53 | 0.20 | 0.33 | lasso | 6 | 0.33 | 3.8e-111 | 5.66 | -5.6 | 2.1e-08 | 0.04 | 0.94 | 0.06 | FALSE |
105 | YFS | Blood | PPP3R1 | 0.24 | 0.32 | enet | 44 | 0.34 | 9.1e-116 | 5.82 | -7.3 | 2.1e-13 | -0.03 | 1.00 | 0.00 | FALSE |
106 | YFS | Blood | WDR92 | 0.05 | 0.05 | lasso | 14 | 0.04 | 1.5e-13 | 6.09 | 5.5 | 3.7e-08 | 0.04 | 1.00 | 0.00 | FALSE |
107 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FAM136A | 0.05 | 0.05 | blup | 42 | 0.04 | 1.3e-04 | -5.66 | 5.4 | 8.5e-08 | 0.02 | 0.02 | 0.94 | FALSE |
108 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | LOC151534 | 0.03 | 0.02 | blup | 30 | 0.02 | 1.3e-02 | 5.52 | 5.4 | 6.8e-08 | -0.04 | 0.02 | 0.73 | FALSE |
109 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ANXA4 | 0.01 | 0.01 | blup | 58 | 0.01 | 2.3e-03 | 5.63 | 5.3 | 1.3e-07 | 0.02 | 0.01 | 0.86 | FALSE |
110 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FAM136A | 0.03 | 0.04 | lasso | 2 | 0.03 | 1.3e-07 | -5.77 | 5.8 | 8.7e-09 | 0.00 | 0.17 | 0.83 | FALSE |
111 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MCEE | 0.03 | 0.00 | blup | 66 | 0.01 | 1.5e-03 | 4.72 | -6.0 | 2.1e-09 | -0.35 | 0.10 | 0.02 | FALSE |
112 | The Cancer Genome Atlas | Colon Adenocarcinoma | FAM136A | 0.10 | 0.12 | lasso | 2 | 0.12 | 3.0e-07 | -5.66 | 5.7 | 1.4e-08 | 0.00 | 0.11 | 0.88 | FALSE |
113 | The Cancer Genome Atlas | Esophageal Carcinoma | PNO1 | 0.08 | 0.07 | enet | 4 | 0.08 | 2.0e-03 | 5.85 | 5.9 | 4.2e-09 | 0.03 | 0.06 | 0.07 | FALSE |
114 | The Cancer Genome Atlas | Esophageal Carcinoma | ZNF638 | 0.12 | 0.08 | lasso | 1 | 0.07 | 2.2e-03 | 13.52 | 13.5 | 1.1e-41 | 0.76 | 0.05 | 0.66 | FALSE |
115 | The Cancer Genome Atlas | Glioblastoma Multiforme | CYP26B1 | 0.19 | 0.01 | lasso | 4 | 0.00 | 3.6e-01 | 4.08 | 6.4 | 1.5e-10 | 0.03 | 0.03 | 0.09 | FALSE |
116 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DYSF | 0.05 | 0.03 | lasso | 4 | 0.01 | 1.4e-02 | 6.03 | 6.4 | 1.7e-10 | 0.05 | 0.30 | 0.02 | FALSE |
117 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | RTKN | 0.02 | 0.01 | blup | 30 | 0.02 | 1.8e-03 | 5.42 | 5.4 | 5.8e-08 | -0.05 | 0.03 | 0.83 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | AUP1 | 0.04 | 0.05 | blup | 23 | 0.06 | 1.3e-07 | 5.58 | -5.8 | 8.5e-09 | 0.04 | 0.01 | 0.99 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FAM136A | 0.04 | 0.03 | blup | 42 | 0.04 | 6.0e-05 | -6.38 | 5.7 | 1.5e-08 | -0.01 | 0.01 | 0.99 | TRUE |
120 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | INO80B | 0.02 | 0.01 | blup | 31 | 0.00 | 1.2e-01 | 5.56 | -5.8 | 7.1e-09 | 0.04 | 0.02 | 0.71 | FALSE |
121 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MRPL53 | 0.05 | 0.08 | lasso | 3 | 0.08 | 4.8e-09 | 5.46 | -5.8 | 7.3e-09 | 0.05 | 0.02 | 0.98 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FAM136A | 0.07 | 0.03 | lasso | 3 | 0.04 | 1.6e-03 | -4.77 | 5.3 | 8.7e-08 | -0.02 | 0.02 | 0.70 | TRUE |
123 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MOGS | 0.02 | 0.02 | blup | 33 | 0.02 | 1.8e-03 | 5.75 | 5.7 | 1.3e-08 | -0.05 | 0.02 | 0.91 | FALSE |
124 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MRPL53 | 0.03 | 0.04 | blup | 32 | 0.04 | 1.2e-05 | 5.75 | -5.8 | 7.2e-09 | 0.05 | 0.02 | 0.98 | FALSE |
125 | The Cancer Genome Atlas | Brain Lower Grade Glioma | WDR92 | 0.04 | 0.01 | blup | 49 | 0.01 | 7.9e-03 | -10.51 | -8.4 | 5.9e-17 | -0.03 | 0.00 | 0.94 | FALSE |
126 | The Cancer Genome Atlas | Lung Adenocarcinoma | FAM136A | 0.04 | 0.03 | blup | 42 | 0.03 | 1.2e-04 | -5.77 | 6.8 | 1.2e-11 | 0.01 | 0.02 | 0.98 | FALSE |
127 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | BOLA3 | 0.03 | 0.02 | blup | 46 | 0.01 | 1.7e-02 | -4.52 | 6.2 | 7.0e-10 | 0.04 | 0.05 | 0.33 | FALSE |
128 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MRPL53 | 0.05 | 0.05 | blup | 32 | 0.04 | 1.3e-03 | 5.58 | -5.5 | 5.1e-08 | 0.04 | 0.02 | 0.96 | FALSE |
129 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | WDR54 | 0.04 | 0.00 | lasso | 4 | 0.02 | 1.7e-02 | 5.11 | -6.2 | 7.3e-10 | 0.01 | 0.01 | 0.74 | FALSE |
130 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ASPRV1 | 0.08 | 0.06 | enet | 14 | 0.06 | 2.4e-03 | -5.95 | 5.4 | 8.3e-08 | 0.01 | 0.19 | 0.16 | FALSE |
131 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ASPRV1 | 0.02 | 0.02 | blup | 58 | 0.02 | 5.4e-03 | -5.80 | 6.3 | 2.5e-10 | 0.01 | 0.22 | 0.06 | TRUE |
132 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C2orf81 | 0.03 | 0.01 | lasso | 5 | 0.01 | 1.1e-02 | 5.11 | -5.2 | 1.9e-07 | 0.04 | 0.02 | 0.67 | FALSE |
133 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EXOC6B | 0.04 | 0.02 | lasso | 6 | 0.02 | 7.0e-03 | 5.79 | -5.5 | 4.2e-08 | 0.03 | 0.27 | 0.02 | FALSE |
134 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LOC151534 | 0.03 | 0.02 | blup | 30 | 0.02 | 1.6e-03 | 5.53 | 6.9 | 5.2e-12 | -0.01 | 0.01 | 0.63 | FALSE |
135 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MCEE | 0.04 | 0.01 | blup | 65 | 0.02 | 4.8e-03 | -1.69 | 6.0 | 1.7e-09 | 0.25 | 0.05 | 0.11 | FALSE |
136 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MRPL53 | 0.03 | 0.03 | blup | 32 | 0.04 | 2.3e-05 | 5.53 | -5.6 | 2.2e-08 | 0.03 | 0.02 | 0.97 | FALSE |
137 | The Cancer Genome Atlas | Prostate Adenocarcinoma | WDR92 | 0.06 | 0.03 | blup | 49 | 0.05 | 6.1e-06 | 2.55 | -6.3 | 2.2e-10 | 0.01 | 0.66 | 0.02 | FALSE |
138 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FAM136A | 0.08 | 0.02 | enet | 4 | 0.03 | 8.7e-03 | 4.00 | 5.8 | 8.4e-09 | -0.01 | 0.03 | 0.35 | FALSE |
139 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FAM136A | 0.04 | 0.04 | lasso | 4 | 0.04 | 8.5e-04 | -6.38 | 6.4 | 1.8e-10 | -0.01 | 0.01 | 0.93 | FALSE |
140 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | MRPL53 | 0.13 | 0.09 | blup | 31 | 0.11 | 8.8e-05 | 5.06 | -5.3 | 9.3e-08 | 0.05 | 0.02 | 0.91 | FALSE |
141 | The Cancer Genome Atlas | Thyroid Carcinoma | FAM136A | 0.05 | 0.04 | lasso | 3 | 0.04 | 4.5e-05 | -5.66 | 6.1 | 1.3e-09 | 0.00 | 0.02 | 0.97 | FALSE |
142 | The Cancer Genome Atlas | Thyroid Carcinoma | MOGS | 0.04 | 0.02 | blup | 33 | 0.01 | 6.5e-02 | 5.53 | 5.2 | 1.7e-07 | -0.05 | 0.02 | 0.84 | FALSE |
143 | The Cancer Genome Atlas | Thyroid Carcinoma | MRPL53 | 0.09 | 0.09 | blup | 32 | 0.09 | 2.2e-09 | 5.53 | -6.0 | 2.5e-09 | 0.04 | 0.02 | 0.98 | FALSE |
144 | The Cancer Genome Atlas | Thyroid Carcinoma | PNO1 | 0.04 | 0.03 | blup | 41 | 0.04 | 1.1e-04 | -8.34 | -7.5 | 6.4e-14 | -0.03 | 0.28 | 0.03 | FALSE |
145 | The Cancer Genome Atlas | Thyroid Carcinoma | TTC31 | 0.04 | 0.04 | blup | 33 | 0.04 | 9.0e-05 | 5.61 | 5.8 | 6.0e-09 | -0.03 | 0.02 | 0.98 | FALSE |
146 | The Cancer Genome Atlas | Thyroid Carcinoma | WDR54 | 0.05 | 0.04 | lasso | 4 | 0.04 | 2.1e-04 | 5.75 | -6.1 | 9.7e-10 | 0.03 | 0.01 | 0.94 | FALSE |
147 | The Cancer Genome Atlas | Thyroid Carcinoma | ZNF638 | 0.08 | 0.05 | enet | 10 | 0.05 | 5.6e-06 | 19.97 | 17.6 | 5.6e-69 | 0.88 | 0.01 | 0.99 | FALSE |
148 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | C2orf81 | 0.11 | 0.05 | blup | 32 | 0.06 | 7.8e-03 | 4.57 | -5.2 | 1.5e-07 | 0.06 | 0.02 | 0.50 | FALSE |