Best TWAS P=2.71e-38 · Best GWAS P=1.53e-45 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | C9orf142 | 0.06 | 0.05 | lasso | 8 | 0.04 | 1.9e-05 | -5.75 | 5.8 | 8.2e-09 | 0.03 | 0.99 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | INPP5E | 0.18 | 0.14 | enet | 21 | 0.21 | 1.6e-24 | 10.39 | -10.5 | 5.3e-26 | -0.07 | 0.01 | 0.99 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | MAN1B1 | 0.09 | 0.06 | bslmm | 368 | 0.07 | 1.0e-08 | -4.45 | -6.4 | 1.3e-10 | -0.05 | 0.81 | 0.19 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SNAPC4 | 0.06 | 0.04 | lasso | 2 | 0.05 | 9.0e-07 | 7.86 | -9.0 | 2.8e-19 | -0.01 | 0.94 | 0.02 | FALSE |
5 | GTEx | Adipose Subcutaneous | SDCCAG3 | 0.13 | 0.00 | enet | 21 | 0.04 | 4.8e-04 | 10.29 | -6.3 | 2.9e-10 | -0.09 | 0.01 | 0.95 | FALSE |
6 | GTEx | Adipose Subcutaneous | MAN1B1 | 0.23 | 0.16 | lasso | 6 | 0.22 | 1.7e-17 | -4.96 | -6.4 | 1.4e-10 | -0.07 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | RP11-229P13.20 | 0.14 | 0.09 | lasso | 4 | 0.08 | 5.9e-07 | -7.90 | 7.8 | 6.1e-15 | 0.01 | 0.00 | 1.00 | FALSE |
8 | GTEx | Adipose Visceral Omentum | DPP7 | 0.10 | 0.06 | enet | 11 | 0.04 | 4.6e-03 | -4.46 | -5.8 | 6.2e-09 | -0.01 | 0.20 | 0.66 | FALSE |
9 | GTEx | Adipose Visceral Omentum | MAN1B1 | 0.19 | 0.17 | lasso | 4 | 0.19 | 4.1e-10 | -4.59 | -5.7 | 1.1e-08 | -0.05 | 0.73 | 0.26 | FALSE |
10 | GTEx | Adipose Visceral Omentum | RP11-229P13.20 | 0.11 | 0.05 | lasso | 4 | 0.09 | 3.0e-05 | -7.46 | 6.6 | 5.5e-11 | 0.03 | 0.01 | 0.98 | FALSE |
11 | GTEx | Adrenal Gland | INPP5E | 0.18 | 0.02 | enet | 23 | 0.10 | 2.2e-04 | 6.89 | -6.4 | 1.7e-10 | -0.02 | 0.20 | 0.14 | FALSE |
12 | GTEx | Artery Aorta | NPDC1 | 0.18 | 0.11 | lasso | 3 | 0.10 | 4.5e-06 | 5.58 | 5.4 | 7.3e-08 | 0.09 | 0.59 | 0.03 | FALSE |
13 | GTEx | Artery Aorta | ABCA2 | 0.15 | 0.09 | enet | 16 | 0.08 | 4.0e-05 | -5.54 | 5.9 | 4.6e-09 | 0.03 | 0.19 | 0.80 | FALSE |
14 | GTEx | Artery Aorta | C9orf142 | 0.18 | 0.19 | lasso | 4 | 0.19 | 9.3e-11 | -5.45 | 5.6 | 2.8e-08 | 0.03 | 1.00 | 0.00 | FALSE |
15 | GTEx | Artery Aorta | CLIC3 | 0.16 | 0.00 | lasso | 4 | 0.06 | 3.8e-04 | -5.51 | 6.3 | 3.4e-10 | 0.06 | 0.35 | 0.08 | FALSE |
16 | GTEx | Artery Tibial | CACFD1 | 0.10 | 0.03 | lasso | 4 | 0.03 | 1.7e-03 | 2.65 | -6.9 | 4.5e-12 | 0.41 | 0.13 | 0.37 | FALSE |
17 | GTEx | Artery Tibial | SDCCAG3 | 0.05 | 0.00 | lasso | 4 | 0.00 | 2.2e-01 | -5.86 | -9.1 | 7.3e-20 | -0.01 | 0.08 | 0.75 | FALSE |
18 | GTEx | Artery Tibial | MAN1B1 | 0.10 | 0.04 | lasso | 5 | 0.06 | 1.6e-05 | -5.58 | -6.1 | 1.2e-09 | -0.07 | 0.54 | 0.46 | FALSE |
19 | GTEx | Artery Tibial | UAP1L1 | 0.11 | 0.09 | lasso | 1 | 0.08 | 1.5e-06 | 5.46 | 5.5 | 4.7e-08 | 0.10 | 0.84 | 0.08 | FALSE |
20 | GTEx | Artery Tibial | RP11-229P13.20 | 0.10 | 0.01 | lasso | 2 | 0.01 | 2.9e-02 | -7.90 | 7.9 | 3.7e-15 | 0.01 | 0.00 | 0.99 | FALSE |
21 | GTEx | Brain Caudate basal ganglia | INPP5E | 0.23 | 0.20 | enet | 8 | 0.22 | 7.2e-07 | 8.66 | -8.1 | 8.2e-16 | -0.07 | 0.45 | 0.27 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | INPP5E | 0.25 | 0.23 | enet | 6 | 0.17 | 3.4e-05 | 8.89 | -9.2 | 5.3e-20 | -0.07 | 0.62 | 0.11 | FALSE |
23 | GTEx | Brain Cerebellar Hemisphere | GPSM1 | 0.26 | 0.07 | lasso | 4 | 0.11 | 9.6e-04 | 3.41 | -7.6 | 2.5e-14 | -0.03 | 0.02 | 0.84 | FALSE |
24 | GTEx | Brain Cerebellum | C9orf142 | 0.29 | 0.16 | enet | 8 | 0.16 | 1.6e-05 | -5.69 | 6.1 | 1.1e-09 | 0.02 | 0.15 | 0.83 | FALSE |
25 | GTEx | Brain Cerebellum | INPP5E | 0.40 | 0.30 | enet | 20 | 0.29 | 3.6e-09 | 8.66 | -8.5 | 1.5e-17 | -0.07 | 0.99 | 0.00 | FALSE |
26 | GTEx | Brain Cortex | RP11-229P13.20 | 0.27 | 0.04 | lasso | 8 | 0.07 | 6.8e-03 | -6.99 | 5.9 | 3.0e-09 | 0.02 | 0.03 | 0.84 | FALSE |
27 | GTEx | Brain Frontal Cortex BA9 | C9orf142 | 0.26 | 0.17 | enet | 21 | 0.21 | 3.5e-06 | -5.45 | 6.5 | 7.9e-11 | 0.04 | 0.31 | 0.33 | FALSE |
28 | GTEx | Brain Nucleus accumbens basal ganglia | C9orf142 | 0.20 | 0.13 | lasso | 3 | 0.15 | 8.7e-05 | -5.40 | 5.5 | 4.1e-08 | 0.04 | 0.38 | 0.37 | FALSE |
29 | GTEx | Brain Putamen basal ganglia | INPP5E | 0.28 | 0.20 | enet | 6 | 0.01 | 2.2e-01 | 8.21 | -8.4 | 3.4e-17 | -0.06 | 0.31 | 0.08 | FALSE |
30 | GTEx | Cells EBV-transformed lymphocytes | INPP5E | 0.27 | 0.05 | enet | 21 | 0.14 | 2.0e-05 | 8.89 | -5.8 | 7.2e-09 | -0.03 | 0.15 | 0.08 | FALSE |
31 | GTEx | Cells EBV-transformed lymphocytes | MAN1B1 | 0.33 | 0.21 | lasso | 5 | 0.22 | 7.0e-08 | -4.55 | -5.5 | 2.9e-08 | -0.04 | 0.59 | 0.25 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | NPDC1 | 0.17 | 0.02 | enet | 12 | 0.03 | 1.9e-03 | 5.46 | 5.2 | 2.6e-07 | 0.10 | 0.51 | 0.08 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | SDCCAG3 | 0.12 | 0.03 | enet | 21 | 0.06 | 5.4e-05 | 10.29 | -10.1 | 6.2e-24 | -0.03 | 0.01 | 0.99 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | CARD9 | 0.10 | 0.01 | enet | 15 | 0.02 | 8.0e-03 | -2.84 | -6.2 | 5.8e-10 | -0.07 | 0.18 | 0.50 | FALSE |
35 | GTEx | Colon Sigmoid | INPP5E | 0.22 | 0.10 | lasso | 3 | 0.01 | 1.6e-01 | 7.68 | -7.9 | 3.8e-15 | -0.01 | 0.46 | 0.18 | FALSE |
36 | GTEx | Colon Sigmoid | MAN1B1 | 0.16 | 0.06 | lasso | 4 | 0.04 | 1.4e-02 | -5.54 | -7.1 | 1.0e-12 | -0.06 | 0.12 | 0.11 | FALSE |
37 | GTEx | Colon Transverse | SEC16A | 0.13 | 0.04 | lasso | 4 | 0.05 | 2.5e-03 | 8.55 | -6.7 | 2.3e-11 | -0.11 | 0.16 | 0.06 | FALSE |
38 | GTEx | Colon Transverse | SDCCAG3 | 0.11 | 0.01 | lasso | 8 | 0.02 | 5.5e-02 | 10.29 | -10.1 | 5.9e-24 | -0.04 | 0.01 | 0.97 | FALSE |
39 | GTEx | Colon Transverse | MAN1B1 | 0.38 | 0.11 | lasso | 4 | 0.20 | 7.9e-10 | -4.45 | -6.0 | 2.7e-09 | -0.06 | 0.92 | 0.07 | FALSE |
40 | GTEx | Esophagus Gastroesophageal Junction | MAN1B1 | 0.19 | 0.21 | enet | 10 | 0.18 | 4.1e-07 | -4.96 | -5.2 | 1.6e-07 | -0.04 | 0.41 | 0.56 | FALSE |
41 | GTEx | Esophagus Mucosa | C9orf142 | 0.09 | 0.02 | lasso | 2 | 0.02 | 1.3e-02 | -5.54 | 5.4 | 7.3e-08 | 0.02 | 0.14 | 0.10 | FALSE |
42 | GTEx | Esophagus Mucosa | INPP5E | 0.11 | 0.12 | lasso | 3 | 0.12 | 1.0e-08 | 8.89 | -8.9 | 6.7e-19 | -0.09 | 0.97 | 0.02 | FALSE |
43 | GTEx | Esophagus Mucosa | SDCCAG3 | 0.09 | 0.02 | lasso | 2 | 0.02 | 2.6e-02 | 8.91 | -6.8 | 8.6e-12 | 0.00 | 0.02 | 0.84 | FALSE |
44 | GTEx | Esophagus Mucosa | MAN1B1 | 0.19 | 0.08 | lasso | 6 | 0.16 | 4.5e-11 | 5.55 | -6.6 | 5.2e-11 | -0.07 | 0.29 | 0.71 | FALSE |
45 | GTEx | Esophagus Muscularis | SDCCAG3 | 0.10 | 0.02 | enet | 5 | 0.02 | 3.6e-02 | 5.26 | -7.9 | 2.1e-15 | -0.10 | 0.07 | 0.74 | FALSE |
46 | GTEx | Esophagus Muscularis | MAN1B1 | 0.15 | 0.06 | lasso | 4 | 0.10 | 1.1e-06 | -4.96 | -6.6 | 4.2e-11 | -0.09 | 0.69 | 0.22 | FALSE |
47 | GTEx | Esophagus Muscularis | RP11-229P13.20 | 0.11 | 0.06 | enet | 11 | 0.12 | 9.5e-08 | -6.21 | 7.7 | 1.3e-14 | 0.06 | 0.04 | 0.95 | FALSE |
48 | GTEx | Heart Atrial Appendage | SURF1 | 0.40 | 0.07 | enet | 43 | 0.19 | 9.3e-09 | -2.81 | 5.3 | 1.1e-07 | -0.40 | 0.56 | 0.37 | TRUE |
49 | GTEx | Heart Atrial Appendage | INPP5E | 0.13 | 0.12 | lasso | 2 | 0.10 | 3.5e-05 | 8.55 | -8.6 | 1.2e-17 | -0.09 | 0.28 | 0.16 | FALSE |
50 | GTEx | Heart Atrial Appendage | RP11-83N9.5 | 0.18 | 0.00 | enet | 11 | 0.00 | 2.2e-01 | 1.14 | 6.2 | 4.6e-10 | -0.01 | 0.03 | 0.31 | FALSE |
51 | GTEx | Heart Left Ventricle | CLIC3 | 0.15 | 0.14 | lasso | 5 | 0.13 | 2.0e-07 | -5.41 | -5.6 | 2.3e-08 | -0.03 | 0.76 | 0.23 | FALSE |
52 | GTEx | Heart Left Ventricle | MAN1B1 | 0.09 | 0.03 | lasso | 4 | 0.02 | 2.8e-02 | -4.55 | -5.4 | 6.6e-08 | -0.05 | 0.19 | 0.30 | FALSE |
53 | GTEx | Liver | PMPCA | 0.31 | 0.00 | lasso | 5 | 0.06 | 8.9e-03 | -1.02 | 7.4 | 1.7e-13 | 0.00 | 0.05 | 0.52 | FALSE |
54 | GTEx | Lung | INPP5E | 0.10 | 0.05 | enet | 13 | 0.04 | 6.1e-04 | 8.66 | -8.8 | 1.2e-18 | -0.07 | 0.74 | 0.04 | FALSE |
55 | GTEx | Lung | CLIC3 | 0.06 | 0.02 | lasso | 2 | 0.01 | 2.6e-02 | -5.79 | -6.5 | 7.2e-11 | -0.01 | 0.06 | 0.70 | FALSE |
56 | GTEx | Lung | MAN1B1 | 0.22 | 0.19 | lasso | 4 | 0.28 | 1.4e-21 | -4.55 | -6.3 | 3.7e-10 | -0.07 | 1.00 | 0.00 | FALSE |
57 | GTEx | Lung | CARD9 | 0.08 | 0.04 | enet | 6 | 0.04 | 2.5e-04 | 5.79 | 8.4 | 3.3e-17 | 0.01 | 0.57 | 0.36 | FALSE |
58 | GTEx | Nerve Tibial | INPP5E | 0.13 | 0.17 | enet | 10 | 0.14 | 3.7e-10 | 8.86 | -8.5 | 1.5e-17 | -0.08 | 1.00 | 0.00 | FALSE |
59 | GTEx | Nerve Tibial | MAN1B1 | 0.19 | 0.14 | lasso | 4 | 0.13 | 1.0e-09 | -4.47 | -5.4 | 5.9e-08 | -0.05 | 0.99 | 0.01 | FALSE |
60 | GTEx | Nerve Tibial | RP11-229P13.20 | 0.08 | 0.11 | lasso | 2 | 0.10 | 1.2e-07 | -6.44 | 6.4 | 1.2e-10 | 0.02 | 0.17 | 0.83 | FALSE |
61 | GTEx | Ovary | INPP5E | 0.24 | 0.13 | enet | 11 | 0.15 | 1.9e-04 | 8.68 | -8.4 | 3.8e-17 | -0.10 | 0.14 | 0.16 | FALSE |
62 | GTEx | Ovary | SEC16A | 0.33 | 0.06 | enet | 10 | 0.14 | 3.4e-04 | 8.21 | -5.2 | 1.7e-07 | -0.05 | 0.06 | 0.08 | FALSE |
63 | GTEx | Pancreas | SEC16A | 0.28 | 0.10 | enet | 16 | 0.16 | 4.1e-07 | 8.55 | -8.6 | 5.6e-18 | -0.10 | 0.28 | 0.69 | FALSE |
64 | GTEx | Pancreas | SDCCAG3 | 0.21 | 0.03 | lasso | 4 | 0.01 | 9.5e-02 | 8.91 | -8.8 | 1.1e-18 | -0.01 | 0.01 | 0.87 | FALSE |
65 | GTEx | Pituitary | INPP5E | 0.21 | 0.24 | lasso | 3 | 0.14 | 1.8e-04 | 8.66 | 8.3 | 1.4e-16 | 0.09 | 0.27 | 0.08 | FALSE |
66 | GTEx | Skin Not Sun Exposed Suprapubic | MAN1B1 | 0.28 | 0.06 | enet | 13 | 0.10 | 2.5e-06 | -4.46 | -7.1 | 1.7e-12 | -0.06 | 0.20 | 0.76 | FALSE |
67 | GTEx | Skin Sun Exposed Lower leg | C9orf142 | 0.06 | 0.03 | lasso | 6 | 0.02 | 3.5e-03 | -6.62 | 7.1 | 1.5e-12 | 0.03 | 0.07 | 0.85 | FALSE |
68 | GTEx | Skin Sun Exposed Lower leg | INPP5E | 0.10 | 0.10 | lasso | 2 | 0.09 | 5.2e-08 | 8.89 | -8.9 | 6.1e-19 | -0.07 | 0.81 | 0.19 | FALSE |
69 | GTEx | Skin Sun Exposed Lower leg | SDCCAG3 | 0.16 | 0.08 | lasso | 4 | 0.07 | 1.0e-06 | 8.91 | -8.8 | 1.2e-18 | 0.00 | 0.04 | 0.94 | FALSE |
70 | GTEx | Skin Sun Exposed Lower leg | MAN1B1 | 0.18 | 0.07 | lasso | 4 | 0.16 | 4.8e-13 | -4.45 | -6.0 | 2.5e-09 | -0.07 | 0.99 | 0.01 | FALSE |
71 | GTEx | Spleen | SARDH | 0.40 | -0.01 | enet | 49 | 0.10 | 1.3e-03 | 0.22 | -6.4 | 1.2e-10 | 0.16 | 0.08 | 0.06 | TRUE |
72 | GTEx | Spleen | PMPCA | 0.24 | 0.15 | lasso | 2 | 0.10 | 1.7e-03 | 9.85 | 9.8 | 1.1e-22 | -0.03 | 0.03 | 0.62 | FALSE |
73 | GTEx | Spleen | MAN1B1 | 0.32 | 0.23 | lasso | 4 | 0.25 | 4.6e-07 | -7.90 | -8.2 | 1.9e-16 | -0.04 | 0.00 | 0.99 | TRUE |
74 | GTEx | Stomach | SURF1 | 0.23 | 0.01 | enet | 31 | 0.06 | 5.8e-04 | 1.14 | 5.3 | 1.3e-07 | -0.35 | 0.13 | 0.12 | FALSE |
75 | GTEx | Stomach | INPP5E | 0.13 | 0.00 | enet | 27 | 0.00 | 2.0e-01 | 8.31 | -5.6 | 1.7e-08 | -0.01 | 0.06 | 0.12 | FALSE |
76 | GTEx | Stomach | SEC16A | 0.15 | 0.09 | lasso | 4 | 0.10 | 1.8e-05 | 8.61 | -8.7 | 2.4e-18 | -0.11 | 0.48 | 0.44 | FALSE |
77 | GTEx | Stomach | SDCCAG3 | 0.24 | 0.07 | lasso | 4 | 0.05 | 1.9e-03 | -5.60 | -8.2 | 3.0e-16 | -0.02 | 0.01 | 0.96 | FALSE |
78 | GTEx | Testis | ENTPD2 | 0.18 | 0.20 | lasso | 2 | 0.18 | 1.4e-08 | -5.88 | -6.3 | 3.1e-10 | -0.04 | 0.20 | 0.79 | FALSE |
79 | GTEx | Testis | INPP5E | 0.24 | 0.32 | enet | 10 | 0.30 | 5.4e-14 | 8.86 | -9.1 | 7.7e-20 | -0.09 | 1.00 | 0.00 | FALSE |
80 | GTEx | Testis | CACFD1 | 0.26 | 0.05 | enet | 25 | 0.10 | 5.3e-05 | -9.58 | -6.5 | 6.9e-11 | 0.34 | 0.30 | 0.15 | TRUE |
81 | GTEx | Testis | SDCCAG3 | 0.15 | 0.09 | lasso | 4 | 0.13 | 3.3e-06 | 10.29 | -10.6 | 5.0e-26 | -0.06 | 0.02 | 0.98 | TRUE |
82 | GTEx | Testis | BRD3 | 0.20 | 0.18 | lasso | 3 | 0.18 | 3.2e-08 | 5.84 | -5.8 | 5.6e-09 | 0.02 | 0.06 | 0.94 | FALSE |
83 | GTEx | Testis | MAN1B1 | 0.29 | 0.27 | lasso | 7 | 0.27 | 3.4e-12 | -4.47 | -6.3 | 2.6e-10 | -0.04 | 0.63 | 0.37 | FALSE |
84 | GTEx | Thyroid | INPP5E | 0.23 | 0.35 | enet | 16 | 0.37 | 8.2e-30 | 8.31 | -10.1 | 5.6e-24 | -0.06 | 1.00 | 0.00 | FALSE |
85 | GTEx | Thyroid | PMPCA | 0.10 | 0.05 | enet | 11 | 0.10 | 8.7e-08 | 9.73 | -8.1 | 4.3e-16 | 0.01 | 0.06 | 0.93 | FALSE |
86 | GTEx | Thyroid | SDCCAG3 | 0.16 | 0.11 | lasso | 3 | 0.12 | 9.4e-10 | 10.29 | -10.0 | 1.4e-23 | -0.02 | 0.02 | 0.98 | FALSE |
87 | GTEx | Thyroid | MAN1B1 | 0.23 | 0.22 | lasso | 7 | 0.26 | 1.1e-19 | -4.46 | -5.5 | 3.4e-08 | -0.06 | 1.00 | 0.00 | FALSE |
88 | GTEx | Uterus | SURF1 | 0.40 | 0.05 | enet | 18 | 0.08 | 9.2e-03 | -6.94 | 5.6 | 2.2e-08 | -0.50 | 0.03 | 0.55 | FALSE |
89 | GTEx | Uterus | INPP5E | 0.60 | 0.04 | enet | 10 | 0.22 | 3.4e-05 | 9.17 | -7.9 | 2.0e-15 | -0.06 | 0.10 | 0.13 | FALSE |
90 | GTEx | Whole Blood | ENTPD2 | 0.11 | 0.03 | enet | 31 | 0.05 | 1.1e-05 | 5.46 | -6.4 | 1.5e-10 | -0.06 | 0.27 | 0.65 | FALSE |
91 | GTEx | Whole Blood | FCN1 | 0.13 | 0.12 | lasso | 3 | 0.12 | 1.4e-11 | 7.89 | 8.1 | 5.8e-16 | 0.06 | 0.00 | 1.00 | TRUE |
92 | GTEx | Whole Blood | NPDC1 | 0.06 | 0.02 | enet | 10 | 0.03 | 5.8e-04 | -7.46 | 6.9 | 4.6e-12 | 0.02 | 0.01 | 0.97 | FALSE |
93 | GTEx | Whole Blood | ABCA2 | 0.12 | 0.04 | enet | 2 | 0.03 | 6.0e-04 | -7.46 | 7.4 | 1.0e-13 | 0.03 | 0.04 | 0.94 | FALSE |
94 | GTEx | Whole Blood | SEC16A | 0.07 | 0.05 | lasso | 5 | 0.04 | 1.3e-04 | 8.55 | -8.6 | 1.1e-17 | -0.10 | 0.24 | 0.75 | FALSE |
95 | GTEx | Whole Blood | SDCCAG3 | 0.07 | 0.03 | enet | 6 | 0.02 | 3.4e-03 | 9.73 | -10.5 | 9.1e-26 | -0.01 | 0.04 | 0.94 | FALSE |
96 | GTEx | Whole Blood | MAN1B1 | 0.12 | 0.10 | lasso | 3 | 0.10 | 1.0e-09 | 5.55 | -7.0 | 2.0e-12 | -0.08 | 0.95 | 0.04 | FALSE |
97 | GTEx | Whole Blood | CARD9 | 0.08 | 0.07 | lasso | 1 | 0.05 | 4.2e-05 | 8.09 | 8.1 | 5.8e-16 | 0.01 | 0.89 | 0.08 | FALSE |
98 | GTEx | Whole Blood | UAP1L1 | 0.31 | 0.25 | enet | 14 | 0.25 | 2.6e-23 | 5.46 | -6.2 | 4.2e-10 | -0.09 | 1.00 | 0.00 | FALSE |
99 | METSIM | Adipose | C9orf96 | 0.07 | 0.01 | blup | 605 | 0.03 | 7.8e-05 | 1.17 | -5.6 | 2.8e-08 | 0.29 | 0.05 | 0.60 | FALSE |
100 | METSIM | Adipose | CARD9 | 0.04 | 0.05 | enet | 6 | 0.06 | 5.9e-09 | -5.86 | 7.6 | 4.1e-14 | 0.02 | 0.99 | 0.01 | FALSE |
101 | METSIM | Adipose | FUT7 | 0.05 | 0.05 | lasso | 1 | 0.04 | 8.6e-07 | -7.46 | -7.5 | 8.4e-14 | -0.03 | 0.04 | 0.96 | FALSE |
102 | METSIM | Adipose | SAPCD2 | 0.06 | 0.05 | lasso | 1 | 0.05 | 1.8e-07 | 5.46 | -5.5 | 4.7e-08 | -0.10 | 1.00 | 0.00 | FALSE |
103 | METSIM | Adipose | SDCCAG3 | 0.08 | 0.04 | bslmm | 357 | 0.05 | 3.9e-08 | 10.29 | -8.6 | 1.1e-17 | 0.01 | 0.00 | 1.00 | FALSE |
104 | METSIM | Adipose | UAP1L1 | 0.12 | 0.04 | blup | 364 | 0.05 | 2.6e-08 | 5.46 | -6.8 | 8.4e-12 | -0.15 | 0.92 | 0.08 | FALSE |
105 | NTR | Blood | BRD3 | 0.04 | 0.04 | bslmm | 555 | 0.04 | 5.7e-12 | 5.88 | -5.5 | 5.1e-08 | 0.01 | 0.08 | 0.92 | FALSE |
106 | NTR | Blood | MAN1B1 | 0.01 | 0.01 | enet | 4 | 0.00 | 7.6e-03 | -5.79 | -6.6 | 4.1e-11 | -0.02 | 0.04 | 0.89 | FALSE |
107 | NTR | Blood | SNAPC4 | 0.02 | 0.01 | lasso | 5 | 0.02 | 6.3e-07 | 8.31 | -6.5 | 6.4e-11 | -0.03 | 0.90 | 0.02 | FALSE |
108 | YFS | Blood | BRD3 | 0.10 | 0.09 | lasso | 4 | 0.10 | 1.5e-31 | 5.76 | -6.2 | 6.2e-10 | 0.01 | 0.10 | 0.90 | TRUE |
109 | YFS | Blood | CARD9 | 0.22 | 0.37 | lasso | 5 | 0.39 | 1.3e-137 | 8.19 | 9.2 | 5.8e-20 | 0.00 | 1.00 | 0.00 | FALSE |
110 | YFS | Blood | CLIC3 | 0.05 | 0.05 | lasso | 8 | 0.05 | 2.0e-15 | 4.32 | 5.3 | 1.3e-07 | 0.04 | 1.00 | 0.00 | FALSE |
111 | YFS | Blood | INPP5E | 0.33 | 0.55 | lasso | 6 | 0.57 | 2.9e-235 | 9.17 | -9.2 | 3.5e-20 | -0.09 | 1.00 | 0.00 | FALSE |
112 | YFS | Blood | NOTCH1 | 0.04 | 0.00 | bslmm | 341 | 0.01 | 3.0e-05 | 5.54 | 5.8 | 4.8e-09 | -0.07 | 0.15 | 0.02 | FALSE |
113 | YFS | Blood | PMPCA | 0.03 | 0.01 | lasso | 5 | 0.02 | 2.7e-07 | 8.31 | 8.0 | 1.4e-15 | 0.04 | 0.94 | 0.05 | FALSE |
114 | YFS | Blood | SDCCAG3 | 0.14 | 0.11 | bslmm | 310 | 0.14 | 1.6e-44 | 9.65 | -6.7 | 2.0e-11 | -0.03 | 0.89 | 0.11 | FALSE |
115 | YFS | Blood | UAP1L1 | 0.28 | 0.34 | enet | 10 | 0.35 | 1.6e-118 | 5.58 | -5.7 | 1.2e-08 | -0.09 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ABO | 0.08 | 0.01 | blup | 43 | 0.07 | 7.9e-07 | -12.24 | -7.0 | 3.0e-12 | 0.33 | 0.02 | 0.97 | FALSE |
117 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FUT7 | 0.04 | 0.01 | enet | 11 | 0.04 | 2.4e-04 | -5.67 | -5.7 | 9.7e-09 | -0.07 | 0.02 | 0.40 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ABCA2 | 0.01 | 0.01 | blup | 48 | 0.00 | 4.1e-02 | -6.62 | 7.3 | 2.1e-13 | 0.02 | 0.01 | 0.74 | FALSE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ABO | 0.07 | 0.08 | lasso | 3 | 0.08 | 5.0e-16 | -12.24 | -12.2 | 2.0e-34 | 0.63 | 0.26 | 0.74 | FALSE |
120 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FUT7 | 0.05 | 0.06 | lasso | 2 | 0.06 | 9.6e-12 | -6.90 | -6.9 | 5.6e-12 | -0.03 | 0.02 | 0.98 | FALSE |
121 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SDCCAG3 | 0.05 | 0.01 | blup | 61 | 0.01 | 7.9e-04 | 8.61 | -6.5 | 6.2e-11 | -0.07 | 0.07 | 0.20 | FALSE |
122 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SEC16A | 0.02 | 0.00 | blup | 69 | 0.01 | 1.0e-03 | 8.66 | -9.3 | 1.2e-20 | -0.06 | 0.03 | 0.84 | FALSE |
123 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | ABO | 0.11 | 0.05 | blup | 43 | 0.12 | 1.2e-06 | 5.41 | -8.3 | 8.2e-17 | 0.36 | 0.02 | 0.97 | FALSE |
124 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | INPP5E | 0.25 | 0.10 | lasso | 3 | 0.09 | 4.9e-05 | 9.17 | -9.6 | 1.3e-21 | -0.09 | 0.15 | 0.59 | FALSE |
125 | The Cancer Genome Atlas | Colon Adenocarcinoma | ABO | 0.27 | 0.31 | blup | 43 | 0.33 | 2.1e-19 | -12.25 | -11.0 | 4.8e-28 | 0.52 | 0.00 | 1.00 | FALSE |
126 | The Cancer Genome Atlas | Colon Adenocarcinoma | INPP5E | 0.11 | 0.08 | lasso | 2 | 0.08 | 3.4e-05 | 9.17 | -9.6 | 9.1e-22 | -0.09 | 0.02 | 0.86 | FALSE |
127 | The Cancer Genome Atlas | Colon Adenocarcinoma | SDCCAG3 | 0.08 | 0.01 | lasso | 4 | 0.02 | 3.1e-02 | 8.91 | -10.3 | 7.7e-25 | -0.05 | 0.01 | 0.74 | FALSE |
128 | The Cancer Genome Atlas | Colon Adenocarcinoma | SNAPC4 | 0.15 | 0.03 | enet | 12 | 0.05 | 1.0e-03 | 8.31 | -6.2 | 4.7e-10 | -0.06 | 0.04 | 0.52 | FALSE |
129 | The Cancer Genome Atlas | Esophageal Carcinoma | ABO | 0.27 | 0.13 | lasso | 2 | 0.11 | 1.8e-04 | -12.25 | -12.2 | 2.1e-34 | 0.63 | 0.02 | 0.96 | TRUE |
130 | The Cancer Genome Atlas | Glioblastoma Multiforme | ABO | 0.18 | 0.01 | blup | 42 | 0.07 | 3.0e-03 | -12.25 | -9.2 | 2.5e-20 | 0.36 | 0.00 | 0.74 | FALSE |
131 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ABO | 0.11 | 0.08 | blup | 43 | 0.12 | 2.5e-13 | -12.25 | -8.7 | 4.8e-18 | 0.42 | 0.01 | 0.99 | FALSE |
132 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FUT7 | 0.05 | 0.03 | lasso | 1 | 0.03 | 1.4e-04 | -6.95 | -7.0 | 3.6e-12 | -0.03 | 0.02 | 0.89 | FALSE |
133 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | INPP5E | 0.03 | 0.01 | blup | 54 | 0.01 | 1.1e-02 | 8.69 | -6.7 | 2.4e-11 | -0.07 | 0.03 | 0.35 | FALSE |
134 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SURF6 | 0.02 | 0.01 | enet | 7 | 0.01 | 1.6e-02 | -2.81 | -6.1 | 8.3e-10 | 0.31 | 0.02 | 0.03 | TRUE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ABO | 0.20 | 0.19 | blup | 43 | 0.33 | 3.0e-38 | 5.25 | -8.3 | 8.4e-17 | 0.37 | 0.57 | 0.43 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PTGDS | 0.05 | 0.01 | blup | 46 | 0.03 | 2.9e-04 | -5.79 | -5.6 | 1.9e-08 | -0.02 | 0.39 | 0.45 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | REXO4 | 0.04 | 0.01 | lasso | 4 | 0.02 | 1.4e-03 | 1.63 | 6.7 | 2.0e-11 | -0.27 | 0.01 | 0.84 | FALSE |
138 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SDCCAG3 | 0.04 | 0.05 | enet | 6 | 0.04 | 5.1e-05 | 8.91 | -9.5 | 1.9e-21 | -0.01 | 0.04 | 0.96 | FALSE |
139 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ABO | 0.31 | 0.38 | lasso | 5 | 0.42 | 3.1e-26 | -12.59 | -12.1 | 6.4e-34 | 0.54 | 0.01 | 0.99 | FALSE |
140 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | C9orf139 | 0.05 | 0.00 | blup | 41 | 0.01 | 5.4e-02 | 0.91 | -6.3 | 2.4e-10 | 0.01 | 0.01 | 0.64 | FALSE |
141 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FUT7 | 0.07 | 0.07 | blup | 38 | 0.07 | 7.6e-05 | -7.46 | -7.5 | 9.2e-14 | 0.00 | 0.00 | 0.99 | FALSE |
142 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | INPP5E | 0.07 | 0.04 | blup | 54 | 0.07 | 6.0e-05 | 10.27 | -10.3 | 4.7e-25 | -0.06 | 0.04 | 0.86 | FALSE |
143 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SDCCAG3 | 0.05 | 0.01 | blup | 61 | 0.01 | 5.9e-02 | 10.39 | -10.0 | 9.8e-24 | -0.01 | 0.01 | 0.84 | FALSE |
144 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ABO | 0.26 | 0.23 | enet | 10 | 0.26 | 6.0e-29 | -12.24 | -12.4 | 2.2e-35 | 0.66 | 0.46 | 0.54 | FALSE |
145 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C8G | 0.04 | 0.03 | blup | 45 | 0.03 | 5.1e-04 | -4.64 | -6.2 | 4.0e-10 | -0.05 | 0.01 | 0.97 | FALSE |
146 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C9orf140 | 0.03 | 0.03 | blup | 48 | 0.02 | 1.1e-03 | 5.58 | 7.8 | 5.8e-15 | 0.09 | 0.02 | 0.63 | FALSE |
147 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FUT7 | 0.02 | 0.02 | blup | 38 | 0.02 | 1.9e-03 | -6.90 | -6.9 | 7.0e-12 | -0.01 | 0.02 | 0.62 | FALSE |
148 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GPSM1 | 0.06 | 0.01 | enet | 11 | 0.02 | 1.0e-03 | 7.57 | -6.5 | 9.2e-11 | -0.03 | 0.05 | 0.66 | FALSE |
149 | The Cancer Genome Atlas | Brain Lower Grade Glioma | INPP5E | 0.04 | 0.02 | blup | 54 | 0.03 | 4.4e-04 | 8.66 | -6.9 | 4.0e-12 | -0.10 | 0.23 | 0.32 | FALSE |
150 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SNAPC4 | 0.13 | 0.05 | enet | 7 | 0.06 | 1.7e-07 | 5.73 | -7.7 | 1.5e-14 | -0.01 | 0.67 | 0.20 | FALSE |
151 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | ABO | 0.23 | 0.23 | lasso | 2 | 0.24 | 2.2e-11 | -12.59 | -12.6 | 1.7e-36 | 0.53 | 0.01 | 0.99 | TRUE |
152 | The Cancer Genome Atlas | Lung Adenocarcinoma | ABO | 0.21 | 0.25 | lasso | 5 | 0.25 | 2.1e-29 | -12.24 | -12.4 | 4.8e-35 | 0.59 | 0.03 | 0.97 | FALSE |
153 | The Cancer Genome Atlas | Lung Adenocarcinoma | FUT7 | 0.07 | 0.08 | lasso | 3 | 0.08 | 1.7e-09 | -6.70 | -7.0 | 3.6e-12 | -0.03 | 0.01 | 0.99 | FALSE |
154 | The Cancer Genome Atlas | Lung Adenocarcinoma | NCRNA00094 | 0.03 | 0.02 | blup | 52 | 0.02 | 2.1e-03 | 5.76 | 5.1 | 3.0e-07 | -0.03 | 0.01 | 0.69 | FALSE |
155 | The Cancer Genome Atlas | Lung Adenocarcinoma | SURF6 | 0.02 | 0.00 | blup | 22 | 0.01 | 1.7e-02 | -2.95 | -5.7 | 1.4e-08 | 0.26 | 0.05 | 0.07 | FALSE |
156 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ABO | 0.08 | 0.06 | blup | 43 | 0.09 | 1.7e-10 | -12.24 | -9.5 | 2.0e-21 | 0.40 | 0.01 | 0.99 | FALSE |
157 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FUT7 | 0.05 | 0.05 | lasso | 2 | 0.05 | 2.8e-06 | -6.62 | -6.7 | 3.0e-11 | -0.03 | 0.01 | 0.99 | FALSE |
158 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ABO | 0.28 | 0.22 | lasso | 8 | 0.22 | 1.2e-14 | -12.24 | -12.6 | 3.3e-36 | 0.63 | 0.01 | 0.99 | FALSE |
159 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ENTPD2 | 0.05 | 0.04 | enet | 5 | 0.04 | 8.2e-04 | -5.88 | 6.2 | 6.9e-10 | 0.04 | 0.16 | 0.10 | FALSE |
160 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ABO | 0.23 | 0.21 | lasso | 5 | 0.20 | 6.7e-09 | -12.59 | -11.1 | 9.1e-29 | 0.49 | 0.01 | 0.99 | FALSE |
161 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ABO | 0.23 | 0.23 | lasso | 3 | 0.23 | 2.0e-09 | -12.25 | -11.9 | 9.8e-33 | 0.61 | 0.01 | 0.99 | FALSE |
162 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | PTGDS | 0.07 | 0.06 | lasso | 7 | 0.07 | 1.0e-03 | -5.73 | -5.1 | 2.9e-07 | -0.02 | 0.09 | 0.36 | FALSE |
163 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ABO | 0.18 | 0.15 | blup | 43 | 0.21 | 3.4e-21 | -12.59 | -6.7 | 3.0e-11 | 0.21 | 0.00 | 1.00 | FALSE |
164 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FUT7 | 0.10 | 0.06 | blup | 38 | 0.05 | 1.1e-05 | -6.95 | -5.5 | 4.1e-08 | -0.02 | 0.00 | 1.00 | FALSE |
165 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SDCCAG3 | 0.08 | 0.05 | lasso | 2 | 0.05 | 3.3e-06 | 8.91 | -9.2 | 4.1e-20 | -0.01 | 0.24 | 0.73 | FALSE |
166 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SEC16A | 0.08 | 0.10 | lasso | 4 | 0.08 | 1.9e-08 | 10.11 | -10.5 | 1.1e-25 | -0.02 | 0.02 | 0.98 | FALSE |
167 | The Cancer Genome Atlas | Rectum Adenocarcinoma | ABO | 0.48 | 0.23 | enet | 10 | 0.27 | 4.7e-07 | -12.77 | -12.9 | 2.7e-38 | 0.65 | 0.00 | 0.99 | TRUE |
168 | The Cancer Genome Atlas | Rectum Adenocarcinoma | DNLZ | 0.75 | 0.03 | enet | 20 | 0.22 | 7.0e-06 | -0.99 | -5.9 | 3.3e-09 | -0.03 | 0.00 | 0.28 | FALSE |
169 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ABO | 0.32 | 0.18 | enet | 10 | 0.20 | 2.3e-12 | -12.24 | -9.1 | 1.1e-19 | 0.49 | 0.02 | 0.98 | FALSE |
170 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FUT7 | 0.09 | 0.05 | enet | 6 | 0.06 | 2.1e-04 | -6.99 | -6.9 | 5.6e-12 | -0.01 | 0.01 | 0.92 | FALSE |
171 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | ABO | 0.38 | 0.11 | blup | 43 | 0.15 | 9.6e-05 | -0.39 | -7.4 | 1.1e-13 | 0.28 | 0.02 | 0.86 | FALSE |
172 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ABO | 0.20 | 0.10 | blup | 42 | 0.18 | 5.8e-13 | -12.24 | -9.6 | 1.0e-21 | 0.45 | 0.01 | 0.99 | FALSE |
173 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ABO | 0.41 | 0.17 | enet | 12 | 0.25 | 3.0e-09 | 7.13 | -8.7 | 4.8e-18 | 0.37 | 0.19 | 0.79 | FALSE |
174 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | FUT7 | 0.15 | 0.06 | blup | 38 | 0.05 | 7.4e-03 | -6.31 | -7.1 | 1.1e-12 | -0.06 | 0.01 | 0.84 | FALSE |
175 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | INPP5E | 0.10 | 0.06 | blup | 54 | 0.08 | 8.1e-04 | 8.89 | -10.6 | 3.0e-26 | -0.04 | 0.06 | 0.52 | FALSE |
176 | The Cancer Genome Atlas | Thyroid Carcinoma | ABO | 0.44 | 0.57 | enet | 18 | 0.60 | 1.9e-73 | -12.24 | -11.2 | 4.2e-29 | 0.51 | 0.01 | 0.99 | FALSE |
177 | The Cancer Genome Atlas | Thyroid Carcinoma | C8G | 0.02 | 0.02 | blup | 45 | 0.02 | 9.3e-03 | -5.45 | -5.6 | 2.7e-08 | -0.04 | 0.01 | 0.88 | FALSE |
178 | The Cancer Genome Atlas | Thyroid Carcinoma | ENTPD2 | 0.03 | 0.03 | lasso | 1 | 0.02 | 2.9e-03 | -6.90 | 6.9 | 5.3e-12 | 0.03 | 0.01 | 0.90 | FALSE |
179 | The Cancer Genome Atlas | Thyroid Carcinoma | INPP5E | 0.11 | 0.16 | lasso | 3 | 0.16 | 2.4e-15 | 8.69 | -9.7 | 4.1e-22 | -0.05 | 0.97 | 0.03 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | SDCCAG3 | 0.16 | 0.14 | lasso | 4 | 0.12 | 8.2e-12 | 8.91 | -9.1 | 1.4e-19 | -0.01 | 0.40 | 0.60 | FALSE |
181 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | ABO | 0.23 | 0.07 | blup | 44 | 0.12 | 4.3e-04 | -12.59 | -10.9 | 6.7e-28 | 0.62 | 0.00 | 0.75 | FALSE |