[Hub]/) : Traits : Blood White Count : ← →

chr1:42,436,054-44,608,672

Best TWAS P=4.28e-15 · Best GWAS P=1.36e-13 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
37	METSIM	Adipose	SLC2A1	0.07	0.05	lasso	10	0.04	2.3e-06	-7.4	-7.8	4.3e-15	0.99	0.00	1.00	TRUE
25	GTEx	Nerve Tibial	TIE1	0.20	0.09	lasso	6	0.13	2.6e-09	5.2	-5.6	1.9e-08	0.06	0.99	0.00	TRUE
16	GTEx	Esophagus Mucosa	LEPRE1	0.06	0.00	enet	24	0.00	5.5e-01	4.6	5.6	2.6e-08	-0.18	0.11	0.04	TRUE
10	GTEx	Breast Mammary Tissue	SLC2A1-AS1	0.23	0.20	lasso	4	0.19	4.6e-10	-7.3	-7.6	3.6e-14	1.00	0.00	1.00	FALSE
32	GTEx	Spleen	SLC2A1-AS1	0.35	0.27	lasso	2	0.24	9.6e-07	-7.4	-7.4	1.7e-13	1.00	0.00	1.00	FALSE
11	GTEx	Breast Mammary Tissue (Male)	SLC2A1-AS1	0.23	0.21	lasso	7	0.16	1.6e-04	-7.4	-7.3	3.7e-13	0.95	0.00	0.97	FALSE
20	GTEx	Heart Left Ventricle	SLC2A1-AS1	0.55	0.40	lasso	9	0.40	8.0e-23	-7.3	-7.2	5.5e-13	1.00	0.00	1.00	FALSE
5	GTEx	Artery Coronary	SLC2A1-AS1	0.48	0.41	lasso	5	0.41	3.4e-15	-7.4	-7.2	7.2e-13	0.99	0.00	1.00	FALSE
38	METSIM	Adipose	SLC2A1-AS1	0.36	0.24	lasso	8	0.24	1.3e-35	-7.4	-7.1	1.0e-12	0.99	0.00	1.00	FALSE
21	GTEx	Lung	SLC2A1-AS1	0.19	0.17	lasso	4	0.17	5.1e-13	-7.4	-7.1	1.5e-12	0.98	0.00	1.00	FALSE
19	GTEx	Heart Atrial Appendage	SLC2A1-AS1	0.32	0.23	lasso	3	0.22	2.2e-10	-7.3	-7.0	1.9e-12	0.99	0.00	1.00	FALSE
30	GTEx	Skin Sun Exposed Lower leg	SLC2A1-AS1	0.43	0.39	lasso	5	0.41	4.6e-36	-7.3	-7.0	3.1e-12	0.99	0.00	1.00	FALSE
3	GTEx	Adipose Subcutaneous	SLC2A1-AS1	0.35	0.27	lasso	4	0.27	4.5e-22	-7.3	-7.0	3.7e-12	0.99	0.00	1.00	FALSE
29	GTEx	Skin Not Sun Exposed Suprapubic	SLC2A1-AS1	0.35	0.26	lasso	5	0.26	9.2e-15	-7.3	-6.9	4.3e-12	0.98	0.00	1.00	FALSE
36	GTEx	Whole Blood	SLC2A1-AS1	0.22	0.14	lasso	2	0.14	1.3e-12	-7.3	-6.9	5.6e-12	0.99	0.00	1.00	FALSE
27	GTEx	Nerve Tibial	SLC2A1-AS1	0.61	0.43	lasso	12	0.44	9.7e-34	-7.3	-6.5	9.6e-11	0.98	0.00	1.00	FALSE
14	GTEx	Colon Transverse	SLC2A1-AS1	0.44	0.27	lasso	5	0.29	3.9e-14	-7.3	-6.1	1.2e-09	0.92	0.00	1.00	FALSE
4	GTEx	Adrenal Gland	SLC2A1-AS1	0.58	0.32	enet	29	0.29	5.1e-11	-7.3	-6.0	1.6e-09	0.86	0.00	1.00	FALSE
28	GTEx	Prostate	SLC2A1-AS1	0.36	0.20	enet	7	0.29	4.3e-08	-7.3	-5.9	4.1e-09	0.87	0.00	0.99	FALSE
17	GTEx	Esophagus Mucosa	SLC2A1-AS1	0.41	0.25	enet	20	0.24	1.7e-16	-7.3	-5.9	4.5e-09	0.93	0.00	1.00	FALSE
13	GTEx	Colon Sigmoid	SLC2A1-AS1	0.56	0.28	lasso	8	0.38	2.9e-14	-2.1	-5.8	5.3e-09	0.86	0.01	0.99	FALSE
7	GTEx	Brain Cerebellar Hemisphere	SLC2A1-AS1	0.46	0.19	enet	18	0.24	6.3e-07	-7.3	-5.7	1.3e-08	0.82	0.00	0.99	FALSE
44	The Cancer Genome Atlas	Lung Adenocarcinoma	MED8	0.02	0.02	blup	39	0.01	7.5e-03	5.0	-5.6	2.5e-08	0.06	0.01	0.68	FALSE
39	YFS	Blood	PPIH	0.01	0.01	lasso	2	0.01	6.8e-05	-5.0	-5.5	2.9e-08	0.23	0.72	0.01	FALSE
43	The Cancer Genome Atlas	Lung Adenocarcinoma	CDC20	0.03	0.03	blup	34	0.03	8.8e-05	5.1	-5.5	3.7e-08	0.07	0.02	0.95	FALSE
6	GTEx	Artery Tibial	SLC2A1-AS1	0.51	0.25	lasso	7	0.37	5.4e-30	-7.3	-5.5	3.8e-08	0.89	0.00	1.00	FALSE
22	GTEx	Muscle Skeletal	TIE1	0.08	0.06	lasso	6	0.05	5.5e-06	5.1	-5.5	4.0e-08	0.05	0.99	0.00	FALSE
42	The Cancer Genome Atlas	Lung Adenocarcinoma	C1orf84	0.02	0.02	blup	45	0.02	1.3e-03	5.2	-5.5	4.0e-08	0.05	0.02	0.87	FALSE
40	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	ELOVL1	0.06	0.04	blup	36	0.03	4.7e-03	5.2	-5.4	5.5e-08	0.05	0.02	0.92	FALSE
15	GTEx	Esophagus Gastroesophageal Junction	SLC2A1-AS1	0.46	0.25	lasso	5	0.34	3.5e-13	-7.3	-5.4	5.7e-08	0.88	0.00	1.00	FALSE
9	GTEx	Breast Mammary Tissue	TIE1	0.08	0.06	lasso	5	0.08	7.1e-05	5.3	-5.4	6.1e-08	0.05	0.71	0.01	FALSE
24	GTEx	Muscle Skeletal	RP1-92O14.6	0.18	0.24	lasso	3	0.24	6.8e-23	5.2	-5.3	1.1e-07	0.05	1.00	0.00	FALSE
26	GTEx	Nerve Tibial	MED8	0.13	0.07	enet	11	0.16	3.6e-11	4.8	5.3	1.3e-07	-0.04	1.00	0.00	FALSE
8	GTEx	Brain Cerebellum	SLC2A1-AS1	0.39	0.12	enet	14	0.23	1.6e-07	-2.1	-5.3	1.4e-07	0.69	0.04	0.94	FALSE
34	GTEx	Thyroid	MED8	0.08	0.07	lasso	3	0.06	2.0e-05	5.2	5.3	1.4e-07	-0.05	0.96	0.00	FALSE
41	The Cancer Genome Atlas	Brain Lower Grade Glioma	C1orf84	0.01	0.02	blup	45	0.02	3.0e-03	4.9	-5.2	1.5e-07	0.04	0.03	0.75	FALSE
12	GTEx	Cells Transformed fibroblasts	RP1-92O14.6	0.12	0.02	lasso	5	0.03	3.6e-03	5.1	-5.2	1.7e-07	0.04	0.84	0.01	FALSE
23	GTEx	Muscle Skeletal	MED8	0.23	0.37	lasso	1	0.37	7.7e-38	5.2	-5.2	1.7e-07	0.05	1.00	0.00	FALSE
33	GTEx	Testis	SZT2	0.14	0.12	lasso	3	0.09	5.7e-05	5.0	5.2	1.8e-07	-0.04	0.84	0.03	FALSE
1	CommonMind	Brain Pre-frontal Cortex	TIE1	0.04	0.05	lasso	3	0.05	2.1e-06	5.2	-5.2	1.9e-07	0.05	1.00	0.00	FALSE
18	GTEx	Esophagus Mucosa	RP1-92O14.6	0.12	0.11	lasso	3	0.09	8.3e-07	5.2	-5.2	1.9e-07	0.05	0.99	0.00	FALSE
31	GTEx	Skin Sun Exposed Lower leg	RP1-92O14.6	0.13	0.07	lasso	5	0.07	1.6e-06	5.0	-5.2	1.9e-07	0.04	1.00	0.00	FALSE
2	GTEx	Adipose Subcutaneous	TIE1	0.10	0.05	lasso	3	0.05	4.4e-05	5.2	-5.2	2.0e-07	0.05	0.98	0.00	FALSE
35	GTEx	Uterus	RP5-994D16.9	0.37	0.20	lasso	6	0.14	7.5e-04	4.6	-5.1	2.9e-07	0.22	0.23	0.08	FALSE