[Hub]/) : Traits : Tanning : ← →

chr2:26,883,355-28,402,863

Best TWAS P=4.17e-11 · Best GWAS P=4.12e-14 conditioned to 5.25e-05

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	IFT172	0.06	0.09	enet	16	0.09	3.9e-11	3.9	5.5	3.7e-08	-0.78	0.37	0.63	FALSE
2	GTEx	Adipose Subcutaneous	AC074117.10	0.06	0.04	lasso	5	0.02	4.8e-03	5.4	-5.1	2.8e-07	0.66	0.57	0.08	FALSE
3	GTEx	Cells Transformed fibroblasts	AC074117.10	0.21	0.19	enet	23	0.18	1.6e-13	5.4	-5.1	2.9e-07	0.65	1.00	0.00	FALSE
4	GTEx	Esophagus Mucosa	AC074117.10	0.12	0.14	lasso	8	0.14	2.1e-09	5.4	-5.5	3.0e-08	0.74	0.91	0.09	FALSE
5	GTEx	Esophagus Muscularis	NRBP1	0.07	0.04	lasso	6	0.04	1.3e-03	5.4	-6.0	1.7e-09	0.81	0.08	0.86	FALSE
6	GTEx	Esophagus Muscularis	AC074117.10	0.17	0.14	enet	5	0.09	6.6e-06	5.4	-5.2	1.7e-07	0.66	0.92	0.06	FALSE
7	GTEx	Ovary	AC074117.10	0.16	0.04	enet	9	0.05	2.0e-02	3.8	-5.6	2.6e-08	0.79	0.06	0.67	FALSE
8	GTEx	Testis	NRBP1	0.16	0.09	lasso	3	0.06	1.8e-03	5.4	-6.5	7.3e-11	0.82	0.02	0.96	FALSE
9	GTEx	Testis	AC074117.10	0.14	0.08	lasso	6	0.12	4.5e-06	4.3	-6.4	1.9e-10	0.88	0.03	0.97	FALSE
10	GTEx	Vagina	AC074117.10	0.14	0.04	enet	13	0.06	1.4e-02	4.2	-5.2	2.0e-07	0.74	0.12	0.36	FALSE
11	METSIM	Adipose	NRBP1	0.06	0.09	lasso	3	0.08	1.6e-12	5.4	-5.5	3.9e-08	0.68	0.99	0.01	FALSE
12	ROSMAP	Brain Pre-frontal Cortex	IFT172	0.07	0.02	blup	287	0.03	5.8e-05	4.1	5.5	5.0e-08	-0.66	0.42	0.50	FALSE
13	ROSMAP	Brain Pre-frontal Cortex	FTH1P3	0.04	0.01	bslmm	280	0.02	2.8e-03	5.4	-5.7	1.4e-08	0.67	0.04	0.73	FALSE
14	The Cancer Genome Atlas	Breast Invasive Carcinoma	GPN1	0.06	0.02	lasso	6	0.02	7.2e-05	-5.8	-5.7	9.9e-09	0.57	0.00	0.98	FALSE
15	The Cancer Genome Atlas	Breast Invasive Carcinoma	SNX17	0.08	0.01	blup	25	0.02	6.6e-05	3.1	5.8	8.8e-09	-0.52	0.00	0.78	FALSE
16	The Cancer Genome Atlas	Glioblastoma Multiforme	NRBP1	0.15	0.10	lasso	2	0.10	5.8e-04	5.4	-5.4	6.7e-08	0.67	0.00	0.72	FALSE
17	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	FNDC4	0.13	0.06	lasso	2	0.05	1.1e-03	-6.7	6.6	4.2e-11	-0.95	0.00	0.91	TRUE