Best TWAS P=6.22e-21 · Best GWAS P=3.43e-19 conditioned to 0.221
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | EIF2B2 | 0.10 | 0.22 | lasso | 6 | 0.21 | 1.4e-25 | -8.95 | 8.9 | 3.6e-19 | -1.00 | 0.01 | 0.99 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | MLH3 | 0.09 | 0.14 | lasso | 10 | 0.15 | 3.6e-18 | -8.54 | 8.6 | 8.6e-18 | -0.98 | 0.01 | 0.99 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | RPS6KL1 | 0.04 | 0.02 | lasso | 5 | 0.02 | 4.8e-04 | 5.43 | -6.0 | 2.6e-09 | 0.53 | 0.27 | 0.26 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | TMED10 | 0.04 | 0.03 | enet | 12 | 0.01 | 1.1e-02 | -8.20 | -7.8 | 4.8e-15 | 0.93 | 0.25 | 0.71 | FALSE |
5 | GTEx | Adipose Subcutaneous | EIF2B2 | 0.14 | 0.22 | enet | 11 | 0.21 | 7.4e-17 | -8.91 | 8.6 | 7.3e-18 | -0.99 | 0.01 | 0.99 | FALSE |
6 | GTEx | Adipose Subcutaneous | RPS6KL1 | 0.09 | 0.12 | lasso | 3 | 0.10 | 2.5e-08 | 5.52 | 5.7 | 1.4e-08 | -0.55 | 0.99 | 0.01 | FALSE |
7 | GTEx | Adipose Subcutaneous | RP11-950C14.3 | 0.13 | 0.19 | enet | 15 | 0.16 | 8.5e-13 | -8.91 | 8.6 | 7.1e-18 | -0.97 | 0.01 | 0.99 | FALSE |
8 | GTEx | Adipose Visceral Omentum | EIF2B2 | 0.16 | 0.16 | enet | 10 | 0.17 | 3.6e-09 | -8.95 | 8.3 | 9.6e-17 | -0.97 | 0.01 | 0.99 | FALSE |
9 | GTEx | Adipose Visceral Omentum | RPS6KL1 | 0.12 | 0.09 | lasso | 2 | 0.08 | 3.7e-05 | 5.64 | 6.5 | 8.3e-11 | -0.60 | 0.61 | 0.30 | FALSE |
10 | GTEx | Adipose Visceral Omentum | RP11-950C14.3 | 0.08 | 0.08 | enet | 6 | 0.04 | 3.1e-03 | -8.95 | 8.9 | 4.6e-19 | -1.00 | 0.02 | 0.98 | FALSE |
11 | GTEx | Adrenal Gland | EIF2B2 | 0.13 | 0.07 | lasso | 2 | 0.01 | 1.0e-01 | -8.68 | -8.6 | 7.8e-18 | 0.95 | 0.05 | 0.83 | FALSE |
12 | GTEx | Artery Aorta | NEK9 | 0.05 | 0.06 | enet | 8 | 0.04 | 2.3e-03 | -7.79 | -8.6 | 7.0e-18 | 0.97 | 0.04 | 0.93 | FALSE |
13 | GTEx | Artery Aorta | MLH3 | 0.19 | 0.07 | enet | 12 | 0.02 | 3.9e-02 | 6.18 | 7.2 | 6.8e-13 | -0.91 | 0.04 | 0.90 | FALSE |
14 | GTEx | Artery Aorta | RPS6KL1 | 0.15 | 0.05 | enet | 13 | 0.07 | 1.2e-04 | -6.41 | 6.4 | 1.9e-10 | -0.80 | 0.08 | 0.92 | FALSE |
15 | GTEx | Artery Aorta | RP11-950C14.3 | 0.17 | 0.11 | lasso | 10 | 0.16 | 6.0e-09 | -8.58 | 8.6 | 1.2e-17 | -0.92 | 0.04 | 0.96 | FALSE |
16 | GTEx | Artery Coronary | RPS6KL1 | 0.10 | 0.18 | lasso | 2 | 0.12 | 5.5e-05 | -7.85 | 7.8 | 4.2e-15 | -0.92 | 0.20 | 0.69 | FALSE |
17 | GTEx | Artery Tibial | RP11-950C14.3 | 0.09 | 0.00 | lasso | 6 | 0.00 | 3.2e-01 | -8.90 | -7.9 | 2.4e-15 | 0.92 | 0.01 | 0.94 | FALSE |
18 | GTEx | Brain Caudate basal ganglia | ZC2HC1C | 0.15 | 0.05 | lasso | 2 | 0.05 | 1.8e-02 | -7.79 | 7.8 | 5.8e-15 | -0.90 | 0.10 | 0.44 | FALSE |
19 | GTEx | Brain Caudate basal ganglia | EIF2B2 | 0.18 | 0.02 | lasso | 4 | 0.05 | 1.7e-02 | -5.42 | 5.4 | 6.6e-08 | -0.57 | 0.08 | 0.43 | FALSE |
20 | GTEx | Brain Hippocampus | YLPM1 | 0.30 | -0.01 | lasso | 9 | -0.01 | 8.4e-01 | 3.49 | 5.2 | 1.9e-07 | -0.47 | 0.05 | 0.26 | FALSE |
21 | GTEx | Brain Putamen basal ganglia | ZC2HC1C | 0.20 | 0.18 | lasso | 1 | 0.16 | 1.2e-04 | -7.65 | 7.7 | 2.0e-14 | -0.91 | 0.12 | 0.75 | FALSE |
22 | GTEx | Breast Mammary Tissue | EIF2B2 | 0.17 | 0.16 | enet | 9 | 0.18 | 1.4e-09 | -8.91 | 8.9 | 5.0e-19 | -0.97 | 0.01 | 0.99 | FALSE |
23 | GTEx | Breast Mammary Tissue | RP11-950C14.3 | 0.11 | 0.11 | enet | 17 | 0.09 | 1.7e-05 | -8.85 | 8.8 | 1.3e-18 | -0.99 | 0.03 | 0.97 | FALSE |
24 | GTEx | Breast Mammary Tissue (Female) | EIF2B2 | 0.25 | 0.24 | lasso | 5 | 0.18 | 4.0e-06 | -8.91 | 8.9 | 5.8e-19 | -1.00 | 0.01 | 0.98 | FALSE |
25 | GTEx | Breast Mammary Tissue (Female) | RP11-950C14.3 | 0.13 | 0.05 | enet | 12 | 0.06 | 6.9e-03 | -7.39 | 8.1 | 5.7e-16 | -0.95 | 0.04 | 0.82 | FALSE |
26 | GTEx | Cells EBV-transformed lymphocytes | EIF2B2 | 0.14 | 0.19 | lasso | 3 | 0.21 | 2.1e-07 | -8.95 | 8.9 | 3.5e-19 | -1.00 | 0.01 | 0.99 | FALSE |
27 | GTEx | Cells Transformed fibroblasts | NEK9 | 0.07 | 0.08 | lasso | 4 | 0.06 | 4.6e-05 | -7.99 | -8.0 | 1.6e-15 | 0.92 | 0.18 | 0.82 | FALSE |
28 | GTEx | Cells Transformed fibroblasts | MLH3 | 0.07 | 0.03 | lasso | 2 | 0.02 | 1.8e-02 | -8.90 | 8.9 | 6.6e-19 | -0.99 | 0.02 | 0.98 | FALSE |
29 | GTEx | Cells Transformed fibroblasts | EIF2B2 | 0.11 | 0.07 | lasso | 2 | 0.06 | 4.8e-05 | -8.95 | 8.8 | 1.0e-18 | -1.00 | 0.01 | 0.99 | FALSE |
30 | GTEx | Cells Transformed fibroblasts | RPS6KL1 | 0.16 | 0.15 | enet | 12 | 0.15 | 2.8e-11 | 5.64 | 5.7 | 1.5e-08 | -0.50 | 1.00 | 0.00 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | RP11-950C14.3 | 0.08 | 0.07 | enet | 23 | 0.06 | 3.6e-05 | -8.09 | 7.2 | 5.9e-13 | -0.84 | 0.04 | 0.96 | FALSE |
32 | GTEx | Colon Sigmoid | EIF2B2 | 0.17 | 0.16 | enet | 15 | 0.12 | 6.2e-05 | 7.24 | 6.6 | 4.7e-11 | -0.77 | 0.02 | 0.97 | FALSE |
33 | GTEx | Colon Sigmoid | RP11-950C14.3 | 0.10 | 0.05 | enet | 17 | 0.05 | 9.0e-03 | -8.85 | 9.3 | 2.1e-20 | -0.93 | 0.03 | 0.88 | FALSE |
34 | GTEx | Colon Transverse | EIF2B2 | 0.12 | 0.14 | enet | 13 | 0.03 | 1.3e-02 | -8.91 | 8.1 | 7.3e-16 | -0.94 | 0.01 | 0.98 | FALSE |
35 | GTEx | Colon Transverse | RP11-950C14.3 | 0.08 | 0.10 | lasso | 4 | 0.09 | 5.6e-05 | 7.04 | 8.3 | 6.8e-17 | -0.93 | 0.02 | 0.97 | FALSE |
36 | GTEx | Esophagus Gastroesophageal Junction | EIF2B2 | 0.20 | 0.11 | enet | 18 | 0.07 | 1.2e-03 | -8.68 | 8.9 | 8.3e-19 | -0.97 | 0.05 | 0.94 | FALSE |
37 | GTEx | Esophagus Gastroesophageal Junction | RP11-950C14.3 | 0.14 | 0.00 | lasso | 6 | 0.00 | 4.5e-01 | -8.92 | 9.4 | 6.2e-21 | -0.92 | 0.04 | 0.66 | TRUE |
38 | GTEx | Esophagus Mucosa | NEK9 | 0.13 | 0.07 | lasso | 6 | 0.06 | 1.4e-04 | -7.68 | 6.9 | 5.8e-12 | -0.88 | 0.27 | 0.72 | FALSE |
39 | GTEx | Esophagus Mucosa | EIF2B2 | 0.17 | 0.24 | enet | 22 | 0.22 | 4.3e-15 | -8.91 | 9.1 | 8.0e-20 | -0.99 | 0.01 | 0.99 | FALSE |
40 | GTEx | Esophagus Mucosa | RPS6KL1 | 0.18 | 0.12 | lasso | 5 | 0.12 | 3.3e-08 | -5.64 | 6.4 | 1.6e-10 | -0.68 | 0.50 | 0.49 | FALSE |
41 | GTEx | Esophagus Mucosa | RP11-950C14.3 | 0.14 | 0.11 | enet | 20 | 0.13 | 6.2e-09 | -8.91 | 7.7 | 1.8e-14 | -0.91 | 0.02 | 0.98 | FALSE |
42 | GTEx | Esophagus Muscularis | EIF2B2 | 0.30 | 0.30 | enet | 34 | 0.30 | 9.1e-19 | -8.95 | 8.0 | 1.7e-15 | -0.96 | 0.01 | 0.99 | FALSE |
43 | GTEx | Esophagus Muscularis | RP11-950C14.3 | 0.16 | 0.08 | enet | 18 | 0.06 | 1.1e-04 | -8.68 | 8.0 | 1.5e-15 | -0.84 | 0.02 | 0.98 | FALSE |
44 | GTEx | Heart Atrial Appendage | EIF2B2 | 0.20 | 0.16 | lasso | 6 | 0.15 | 3.4e-07 | -8.54 | 8.7 | 4.2e-18 | -0.99 | 0.05 | 0.94 | FALSE |
45 | GTEx | Heart Atrial Appendage | RP11-950C14.3 | 0.14 | 0.13 | lasso | 1 | 0.12 | 6.2e-06 | -8.58 | 8.6 | 9.6e-18 | -0.98 | 0.07 | 0.93 | FALSE |
46 | GTEx | Heart Left Ventricle | ACYP1 | 0.07 | 0.08 | enet | 15 | 0.08 | 2.9e-05 | -8.90 | -7.4 | 1.5e-13 | 0.84 | 0.02 | 0.97 | FALSE |
47 | GTEx | Heart Left Ventricle | EIF2B2 | 0.13 | 0.13 | enet | 14 | 0.09 | 1.0e-05 | -8.90 | 7.3 | 3.4e-13 | -0.89 | 0.02 | 0.97 | FALSE |
48 | GTEx | Heart Left Ventricle | RP11-950C14.3 | 0.12 | 0.04 | enet | 10 | 0.03 | 8.8e-03 | 7.04 | 7.1 | 1.2e-12 | -0.85 | 0.02 | 0.97 | FALSE |
49 | GTEx | Lung | EIF2B2 | 0.08 | 0.04 | enet | 18 | 0.03 | 1.6e-03 | -8.95 | 7.3 | 2.3e-13 | -0.90 | 0.02 | 0.98 | FALSE |
50 | GTEx | Lung | RPS6KL1 | 0.09 | 0.09 | enet | 24 | 0.08 | 1.8e-06 | 5.57 | 7.8 | 6.4e-15 | -0.52 | 0.90 | 0.08 | FALSE |
51 | GTEx | Lung | RP11-950C14.3 | 0.04 | 0.05 | lasso | 4 | 0.04 | 3.0e-04 | -8.91 | 8.7 | 2.5e-18 | -0.99 | 0.02 | 0.97 | FALSE |
52 | GTEx | Muscle Skeletal | EIF2B2 | 0.07 | 0.06 | enet | 7 | 0.04 | 4.3e-05 | -8.95 | 8.9 | 3.9e-19 | -1.00 | 0.01 | 0.99 | FALSE |
53 | GTEx | Nerve Tibial | EIF2B2 | 0.19 | 0.31 | enet | 8 | 0.30 | 2.0e-21 | -8.91 | 8.9 | 5.4e-19 | -1.00 | 0.01 | 0.99 | FALSE |
54 | GTEx | Nerve Tibial | RPS6KL1 | 0.17 | 0.24 | lasso | 6 | 0.19 | 2.3e-13 | 5.52 | 6.0 | 1.8e-09 | -0.58 | 1.00 | 0.00 | FALSE |
55 | GTEx | Nerve Tibial | RP11-950C14.3 | 0.09 | 0.13 | enet | 12 | 0.12 | 1.7e-08 | -8.95 | 8.0 | 1.5e-15 | -0.95 | 0.01 | 0.99 | FALSE |
56 | GTEx | Pancreas | ZC2HC1C | 0.16 | 0.01 | enet | 31 | 0.04 | 1.1e-02 | -4.98 | -7.8 | 8.9e-15 | 0.74 | 0.08 | 0.89 | FALSE |
57 | GTEx | Skin Not Sun Exposed Suprapubic | EIF2B2 | 0.09 | 0.06 | lasso | 6 | 0.02 | 2.1e-02 | -7.66 | 8.0 | 1.6e-15 | -0.92 | 0.10 | 0.84 | FALSE |
58 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-950C14.3 | 0.07 | 0.03 | enet | 8 | 0.03 | 1.2e-02 | -7.66 | 6.6 | 4.1e-11 | -0.79 | 0.14 | 0.63 | FALSE |
59 | GTEx | Skin Sun Exposed Lower leg | EIF2B2 | 0.05 | 0.03 | lasso | 3 | 0.01 | 2.1e-02 | -8.68 | 7.8 | 7.7e-15 | -0.93 | 0.05 | 0.88 | FALSE |
60 | GTEx | Skin Sun Exposed Lower leg | RPS6KL1 | 0.15 | 0.13 | lasso | 4 | 0.12 | 1.8e-10 | 5.64 | 5.6 | 2.3e-08 | -0.50 | 1.00 | 0.00 | FALSE |
61 | GTEx | Spleen | ACYP1 | 0.27 | 0.00 | lasso | 4 | 0.01 | 1.5e-01 | -1.46 | 5.8 | 6.9e-09 | -0.65 | 0.06 | 0.10 | FALSE |
62 | GTEx | Spleen | EIF2B2 | 0.25 | 0.20 | enet | 14 | 0.20 | 6.1e-06 | -8.85 | 8.7 | 3.3e-18 | -0.96 | 0.02 | 0.98 | FALSE |
63 | GTEx | Spleen | RP11-950C14.3 | 0.28 | 0.10 | enet | 13 | 0.06 | 1.6e-02 | -8.55 | 7.8 | 6.4e-15 | -0.89 | 0.03 | 0.90 | FALSE |
64 | GTEx | Spleen | RP11-316E14.6 | 0.25 | -0.01 | enet | 13 | 0.00 | 2.8e-01 | -7.65 | -7.1 | 1.3e-12 | 0.80 | 0.06 | 0.31 | FALSE |
65 | GTEx | Stomach | EIF2B2 | 0.09 | 0.11 | enet | 5 | 0.06 | 4.9e-04 | -8.91 | 9.0 | 1.6e-19 | -1.00 | 0.01 | 0.98 | FALSE |
66 | GTEx | Stomach | RPS6KL1 | 0.09 | -0.01 | enet | 16 | 0.00 | 3.3e-01 | -5.37 | 5.8 | 7.1e-09 | -0.60 | 0.12 | 0.17 | FALSE |
67 | GTEx | Testis | MLH3 | 0.10 | 0.01 | lasso | 2 | 0.01 | 1.8e-01 | -7.94 | 8.1 | 5.8e-16 | -0.92 | 0.07 | 0.70 | FALSE |
68 | GTEx | Testis | ZC2HC1C | 0.37 | 0.36 | enet | 20 | 0.29 | 1.8e-13 | -7.66 | 7.3 | 3.5e-13 | -0.91 | 0.62 | 0.38 | FALSE |
69 | GTEx | Testis | EIF2B2 | 0.26 | 0.33 | enet | 15 | 0.30 | 1.2e-13 | -8.85 | 8.8 | 1.0e-18 | -1.00 | 0.02 | 0.98 | FALSE |
70 | GTEx | Testis | RP11-950C14.3 | 0.15 | 0.13 | enet | 14 | 0.13 | 1.8e-06 | -7.08 | 8.4 | 3.8e-17 | -0.96 | 0.03 | 0.97 | FALSE |
71 | GTEx | Uterus | TMED10 | 0.41 | 0.13 | enet | 20 | 0.10 | 5.1e-03 | -7.32 | -7.1 | 1.1e-12 | 0.78 | 0.06 | 0.43 | FALSE |
72 | GTEx | Whole Blood | EIF2B2 | 0.09 | 0.01 | lasso | 4 | 0.02 | 4.5e-03 | -0.88 | 5.7 | 9.5e-09 | -0.71 | 0.03 | 0.77 | FALSE |
73 | GTEx | Whole Blood | RP11-316E14.6 | 0.23 | 0.02 | enet | 44 | 0.08 | 1.5e-07 | 2.46 | 5.1 | 2.8e-07 | -0.37 | 0.78 | 0.06 | FALSE |
74 | METSIM | Adipose | ACYP1 | 0.03 | 0.02 | blup | 413 | 0.02 | 4.0e-04 | -7.32 | 7.0 | 3.8e-12 | -0.86 | 0.13 | 0.85 | FALSE |
75 | METSIM | Adipose | EIF2B2 | 0.12 | 0.18 | lasso | 1 | 0.18 | 1.7e-26 | -8.55 | 8.6 | 1.2e-17 | -0.98 | 0.03 | 0.97 | FALSE |
76 | METSIM | Adipose | RPS6KL1 | 0.07 | 0.07 | blup | 386 | 0.06 | 1.3e-09 | 5.43 | 6.1 | 1.0e-09 | -0.67 | 1.00 | 0.00 | FALSE |
77 | NTR | Blood | MLH3 | 0.02 | 0.01 | enet | 10 | 0.01 | 3.0e-04 | -8.54 | 7.4 | 1.3e-13 | -0.96 | 0.04 | 0.96 | FALSE |
78 | YFS | Blood | EIF2B2 | 0.14 | 0.29 | enet | 40 | 0.30 | 8.6e-100 | -8.85 | 8.4 | 3.1e-17 | -0.98 | 0.01 | 0.99 | FALSE |
79 | YFS | Blood | FLVCR2 | 0.16 | 0.12 | enet | 31 | 0.15 | 1.6e-45 | -4.28 | -5.2 | 2.2e-07 | -0.03 | 1.00 | 0.00 | TRUE |
80 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | EIF2B2 | 0.03 | 0.04 | enet | 5 | 0.03 | 9.9e-04 | -8.95 | 8.9 | 4.1e-19 | -1.00 | 0.01 | 0.93 | FALSE |
81 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EIF2B2 | 0.02 | 0.03 | blup | 29 | 0.04 | 6.3e-08 | -7.87 | 8.4 | 2.8e-17 | -0.97 | 0.03 | 0.97 | FALSE |
82 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MLH3 | 0.08 | 0.08 | lasso | 6 | 0.10 | 7.2e-19 | -8.58 | 8.4 | 3.5e-17 | -0.93 | 0.02 | 0.98 | FALSE |
83 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | EIF2B2 | 0.05 | 0.06 | enet | 12 | 0.06 | 6.8e-04 | -7.87 | 8.1 | 4.3e-16 | -0.94 | 0.03 | 0.85 | FALSE |
84 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | MLH3 | 0.05 | 0.07 | enet | 3 | 0.06 | 8.9e-04 | -7.87 | 7.8 | 8.0e-15 | -0.92 | 0.09 | 0.65 | FALSE |
85 | The Cancer Genome Atlas | Colon Adenocarcinoma | EIF2B2 | 0.10 | 0.03 | lasso | 3 | 0.02 | 3.4e-02 | -8.68 | 8.0 | 1.8e-15 | -0.92 | 0.01 | 0.85 | FALSE |
86 | The Cancer Genome Atlas | Colon Adenocarcinoma | MLH3 | 0.07 | 0.08 | enet | 9 | 0.06 | 1.5e-04 | 6.67 | 7.4 | 1.2e-13 | -0.89 | 0.05 | 0.93 | FALSE |
87 | The Cancer Genome Atlas | Esophageal Carcinoma | EIF2B2 | 0.18 | 0.04 | enet | 13 | 0.12 | 1.3e-04 | -8.91 | 7.3 | 2.2e-13 | -0.85 | 0.01 | 0.86 | FALSE |
88 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | MLH3 | 0.06 | 0.13 | enet | 11 | 0.13 | 2.1e-14 | -8.85 | 8.7 | 4.9e-18 | -0.98 | 0.01 | 0.99 | FALSE |
89 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MLH3 | 0.07 | 0.09 | blup | 43 | 0.08 | 3.9e-09 | -8.61 | 8.3 | 1.2e-16 | -0.98 | 0.03 | 0.97 | FALSE |
90 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NEK9 | 0.02 | 0.02 | blup | 48 | 0.02 | 4.6e-03 | -8.02 | 7.8 | 4.5e-15 | -0.91 | 0.05 | 0.34 | FALSE |
91 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | MLH3 | 0.07 | 0.07 | blup | 44 | 0.06 | 1.4e-04 | -8.85 | 8.4 | 5.1e-17 | -0.98 | 0.03 | 0.91 | FALSE |
92 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | RPS6KL1 | 0.09 | 0.10 | blup | 49 | 0.11 | 5.1e-07 | -6.41 | 6.2 | 5.4e-10 | -0.69 | 0.49 | 0.49 | FALSE |
93 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ACYP1 | 0.10 | 0.03 | lasso | 3 | 0.03 | 3.8e-04 | -8.11 | -8.1 | 5.2e-16 | 0.92 | 0.15 | 0.76 | FALSE |
94 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EIF2B2 | 0.03 | 0.03 | blup | 30 | 0.04 | 4.8e-05 | -4.98 | 8.4 | 5.7e-17 | -0.96 | 0.02 | 0.97 | FALSE |
95 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MLH3 | 0.15 | 0.05 | blup | 44 | 0.04 | 9.0e-06 | -8.92 | 8.5 | 2.5e-17 | -0.90 | 0.01 | 0.99 | FALSE |
96 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TMED10 | 0.05 | 0.00 | blup | 37 | 0.03 | 1.7e-04 | -7.66 | -6.7 | 2.3e-11 | 0.64 | 0.06 | 0.56 | FALSE |
97 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | EIF2B2 | 0.04 | 0.03 | enet | 7 | 0.02 | 3.8e-02 | -8.54 | 8.2 | 2.6e-16 | -0.95 | 0.02 | 0.78 | FALSE |
98 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | MLH3 | 0.13 | 0.01 | enet | 9 | 0.02 | 2.5e-02 | -8.54 | 8.2 | 2.1e-16 | -0.94 | 0.01 | 0.91 | FALSE |
99 | The Cancer Genome Atlas | Lung Adenocarcinoma | ACYP1 | 0.02 | 0.01 | blup | 38 | 0.01 | 3.2e-02 | -8.90 | -8.5 | 1.4e-17 | 0.98 | 0.02 | 0.76 | FALSE |
100 | The Cancer Genome Atlas | Lung Adenocarcinoma | EIF2B2 | 0.02 | 0.02 | blup | 29 | 0.04 | 3.5e-05 | -8.54 | 8.5 | 2.2e-17 | -0.97 | 0.03 | 0.97 | FALSE |
101 | The Cancer Genome Atlas | Lung Adenocarcinoma | MLH3 | 0.06 | 0.07 | lasso | 5 | 0.06 | 6.5e-08 | -7.67 | 8.2 | 3.1e-16 | -0.96 | 0.18 | 0.82 | FALSE |
102 | The Cancer Genome Atlas | Lung Adenocarcinoma | RPS6KL1 | 0.03 | 0.01 | blup | 49 | 0.02 | 2.3e-03 | 4.85 | 6.6 | 4.8e-11 | -0.69 | 0.03 | 0.56 | FALSE |
103 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | EIF2B2 | 0.04 | 0.01 | blup | 30 | 0.02 | 1.1e-03 | -8.95 | 8.6 | 1.1e-17 | -0.99 | 0.01 | 0.97 | FALSE |
104 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MLH3 | 0.09 | 0.12 | lasso | 4 | 0.12 | 6.0e-14 | -8.51 | 8.6 | 1.1e-17 | -0.97 | 0.02 | 0.98 | FALSE |
105 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | RPS6KL1 | 0.02 | 0.02 | lasso | 2 | 0.02 | 5.6e-03 | 4.78 | 5.7 | 1.1e-08 | -0.62 | 0.02 | 0.67 | FALSE |
106 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MLH3 | 0.14 | 0.07 | enet | 8 | 0.08 | 2.9e-06 | -8.68 | 7.5 | 4.5e-14 | -0.89 | 0.03 | 0.96 | FALSE |
107 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | EIF2B2 | 0.28 | 0.12 | blup | 29 | 0.13 | 4.0e-06 | -8.93 | 7.6 | 3.6e-14 | -0.85 | 0.01 | 0.99 | FALSE |
108 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | MLH3 | 0.09 | 0.09 | enet | 6 | 0.08 | 2.7e-04 | -8.68 | 8.2 | 1.6e-16 | -0.90 | 0.01 | 0.97 | FALSE |
109 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | PGF | 0.09 | 0.06 | enet | 4 | 0.06 | 2.5e-03 | -8.91 | -8.8 | 1.5e-18 | 1.00 | 0.00 | 0.92 | FALSE |
110 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EIF2B2 | 0.05 | 0.07 | lasso | 2 | 0.07 | 7.2e-08 | -8.54 | 8.7 | 2.2e-18 | -0.99 | 0.02 | 0.98 | FALSE |
111 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MLH3 | 0.09 | 0.13 | lasso | 1 | 0.12 | 7.5e-13 | -8.61 | 8.6 | 7.3e-18 | -0.98 | 0.02 | 0.98 | FALSE |
112 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RPS6KL1 | 0.09 | 0.04 | enet | 6 | 0.06 | 1.1e-06 | 5.43 | 5.9 | 3.3e-09 | -0.59 | 0.98 | 0.01 | FALSE |
113 | The Cancer Genome Atlas | Rectum Adenocarcinoma | MLH3 | 0.22 | 0.01 | blup | 43 | 0.01 | 1.6e-01 | -8.85 | 8.5 | 1.4e-17 | -0.99 | 0.01 | 0.59 | FALSE |
114 | The Cancer Genome Atlas | Soft Tissue Sarcoma | EIF2B2 | 0.05 | 0.01 | lasso | 2 | 0.02 | 1.4e-02 | -8.58 | 8.5 | 1.5e-17 | -0.96 | 0.02 | 0.77 | FALSE |
115 | The Cancer Genome Atlas | Stomach Adenocarcinoma | EIF2B2 | 0.03 | 0.03 | enet | 9 | 0.04 | 1.1e-03 | -8.91 | 8.7 | 2.6e-18 | -0.98 | 0.01 | 0.88 | FALSE |
116 | The Cancer Genome Atlas | Stomach Adenocarcinoma | MLH3 | 0.07 | 0.06 | blup | 43 | 0.06 | 2.1e-05 | -8.58 | 8.5 | 2.2e-17 | -0.98 | 0.05 | 0.95 | FALSE |
117 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | EIF2B2 | 0.15 | 0.14 | enet | 19 | 0.14 | 1.2e-05 | -8.54 | 8.6 | 7.7e-18 | -0.98 | 0.02 | 0.98 | FALSE |
118 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | MLH3 | 0.13 | 0.16 | enet | 14 | 0.13 | 3.4e-05 | -8.54 | 8.7 | 4.3e-18 | -0.99 | 0.02 | 0.98 | FALSE |
119 | The Cancer Genome Atlas | Thyroid Carcinoma | EIF2B2 | 0.04 | 0.04 | blup | 28 | 0.05 | 1.1e-05 | -8.95 | 8.7 | 3.4e-18 | -1.00 | 0.01 | 0.99 | FALSE |
120 | The Cancer Genome Atlas | Thyroid Carcinoma | MLH3 | 0.14 | 0.20 | lasso | 5 | 0.20 | 6.6e-19 | -8.54 | 8.7 | 3.9e-18 | -0.99 | 0.03 | 0.97 | FALSE |
121 | The Cancer Genome Atlas | Thyroid Carcinoma | PGF | 0.07 | 0.00 | lasso | 3 | 0.00 | 2.4e-01 | -6.41 | 6.0 | 1.9e-09 | -0.57 | 0.05 | 0.06 | FALSE |
122 | The Cancer Genome Atlas | Thyroid Carcinoma | RPS6KL1 | 0.20 | 0.17 | lasso | 2 | 0.17 | 5.3e-16 | 5.64 | 6.3 | 2.9e-10 | -0.61 | 0.97 | 0.03 | FALSE |