Best TWAS P=3.57e-42 · Best GWAS P=1.08e-42 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ACACA | 0.07 | 0.05 | lasso | 3 | 0.04 | 2.0e-05 | 7.50 | -7.4 | 1.2e-13 | -0.03 | 0.01 | 0.99 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | C17orf78 | 0.13 | 0.01 | blup | 383 | 0.02 | 1.2e-03 | -6.25 | -5.6 | 2.6e-08 | -0.06 | 0.06 | 0.92 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | PGAP3 | 0.04 | 0.00 | bslmm | 329 | 0.02 | 5.3e-03 | 12.15 | 9.2 | 3.4e-20 | 0.60 | 0.10 | 0.22 | TRUE |
4 | CommonMind | Brain Pre-frontal Cortex | SYNRG | 0.14 | 0.06 | bslmm | 331 | 0.05 | 5.9e-07 | 5.76 | -5.8 | 7.3e-09 | 0.00 | 0.31 | 0.68 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | TCAP | 0.06 | 0.00 | blup | 332 | 0.01 | 8.3e-03 | 13.58 | 11.2 | 5.5e-29 | 0.82 | 0.05 | 0.90 | TRUE |
6 | GTEx | Adipose Subcutaneous | SYNRG | 0.26 | 0.26 | lasso | 6 | 0.24 | 7.7e-20 | 5.76 | 5.7 | 1.3e-08 | 0.04 | 0.99 | 0.01 | FALSE |
7 | GTEx | Adipose Subcutaneous | TADA2A | 0.33 | 0.30 | lasso | 6 | 0.29 | 3.4e-24 | 7.54 | 7.5 | 5.9e-14 | 0.03 | 0.01 | 0.99 | FALSE |
8 | GTEx | Adipose Visceral Omentum | TADA2A | 0.44 | 0.28 | lasso | 10 | 0.27 | 1.5e-14 | 7.37 | 6.6 | 3.4e-11 | 0.03 | 0.02 | 0.98 | FALSE |
9 | GTEx | Adipose Visceral Omentum | PGAP3 | 0.12 | 0.11 | lasso | 6 | 0.10 | 7.1e-06 | 10.08 | 9.7 | 4.8e-22 | 0.65 | 0.86 | 0.12 | FALSE |
10 | GTEx | Adrenal Gland | TADA2A | 0.28 | 0.20 | lasso | 6 | 0.23 | 1.0e-08 | 7.25 | 6.2 | 5.6e-10 | 0.04 | 0.01 | 0.98 | FALSE |
11 | GTEx | Adrenal Gland | DUSP14 | 0.22 | 0.12 | lasso | 5 | 0.07 | 1.7e-03 | 7.50 | 7.3 | 2.0e-13 | 0.04 | 0.01 | 0.96 | FALSE |
12 | GTEx | Adrenal Gland | PGAP3 | 0.17 | 0.14 | lasso | 2 | 0.12 | 3.2e-05 | 12.57 | 11.7 | 1.2e-31 | 0.73 | 0.51 | 0.18 | TRUE |
13 | GTEx | Artery Aorta | SYNRG | 0.39 | 0.38 | enet | 4 | 0.38 | 6.1e-22 | 5.76 | 5.4 | 5.4e-08 | 0.04 | 0.99 | 0.01 | FALSE |
14 | GTEx | Artery Aorta | TADA2A | 0.52 | 0.47 | lasso | 9 | 0.46 | 2.3e-28 | 7.41 | 7.5 | 7.2e-14 | 0.04 | 0.01 | 0.99 | FALSE |
15 | GTEx | Artery Aorta | DUSP14 | 0.13 | 0.12 | lasso | 8 | 0.09 | 8.3e-06 | 7.41 | 7.6 | 2.6e-14 | 0.03 | 0.01 | 0.99 | FALSE |
16 | GTEx | Artery Aorta | PGAP3 | 0.13 | 0.04 | lasso | 3 | 0.10 | 5.3e-06 | 12.60 | 12.6 | 3.6e-36 | 0.68 | 0.12 | 0.85 | FALSE |
17 | GTEx | Artery Coronary | SYNRG | 0.49 | 0.13 | lasso | 8 | 0.17 | 1.9e-06 | 5.76 | 5.4 | 7.1e-08 | 0.05 | 0.02 | 0.96 | FALSE |
18 | GTEx | Artery Coronary | TADA2A | 0.37 | 0.22 | lasso | 8 | 0.19 | 7.4e-07 | 7.54 | 7.5 | 6.7e-14 | 0.04 | 0.01 | 0.99 | FALSE |
19 | GTEx | Artery Coronary | PGAP3 | 0.16 | 0.10 | lasso | 4 | 0.06 | 5.9e-03 | 9.07 | 10.0 | 1.2e-23 | 0.67 | 0.12 | 0.51 | FALSE |
20 | GTEx | Artery Tibial | SYNRG | 0.31 | 0.26 | lasso | 4 | 0.26 | 1.8e-20 | 5.76 | 5.4 | 7.6e-08 | 0.04 | 0.97 | 0.03 | FALSE |
21 | GTEx | Artery Tibial | TADA2A | 0.44 | 0.52 | lasso | 5 | 0.52 | 7.5e-47 | 7.54 | 7.5 | 4.6e-14 | 0.03 | 0.01 | 0.99 | FALSE |
22 | GTEx | Artery Tibial | DUSP14 | 0.14 | 0.13 | lasso | 2 | 0.12 | 1.2e-09 | 7.50 | 7.5 | 6.1e-14 | 0.03 | 0.01 | 0.99 | FALSE |
23 | GTEx | Brain Cerebellar Hemisphere | TADA2A | 0.26 | 0.12 | lasso | 5 | 0.07 | 6.2e-03 | 5.76 | 6.6 | 3.3e-11 | 0.04 | 0.02 | 0.94 | FALSE |
24 | GTEx | Brain Cerebellum | SYNRG | 0.25 | 0.25 | lasso | 4 | 0.26 | 1.9e-08 | 4.51 | 5.4 | 7.1e-08 | 0.04 | 0.22 | 0.68 | FALSE |
25 | GTEx | Brain Cerebellum | GSDMB | 0.24 | 0.09 | lasso | 2 | 0.08 | 2.1e-03 | -4.90 | 5.6 | 2.7e-08 | 0.15 | 0.15 | 0.05 | TRUE |
26 | GTEx | Brain Cerebellum | TADA2A | 0.21 | 0.11 | enet | 9 | 0.10 | 8.9e-04 | 7.53 | 7.5 | 6.4e-14 | 0.04 | 0.01 | 0.94 | FALSE |
27 | GTEx | Brain Cortex | DUSP14 | 0.27 | 0.00 | enet | 23 | 0.03 | 5.8e-02 | 7.65 | 5.9 | 4.5e-09 | -0.03 | 0.02 | 0.53 | FALSE |
28 | GTEx | Brain Frontal Cortex BA9 | TADA2A | 0.28 | 0.12 | lasso | 4 | 0.12 | 5.6e-04 | 5.76 | 5.5 | 4.8e-08 | 0.04 | 0.02 | 0.80 | FALSE |
29 | GTEx | Brain Putamen basal ganglia | GSDMB | 0.26 | 0.09 | lasso | 6 | 0.20 | 1.5e-05 | -3.75 | 5.3 | 1.1e-07 | 0.13 | 0.10 | 0.06 | FALSE |
30 | GTEx | Breast Mammary Tissue | SYNRG | 0.28 | 0.25 | lasso | 4 | 0.24 | 7.5e-13 | 5.76 | 5.8 | 5.1e-09 | 0.03 | 0.12 | 0.88 | FALSE |
31 | GTEx | Breast Mammary Tissue | TADA2A | 0.24 | 0.20 | lasso | 4 | 0.20 | 2.4e-10 | 7.50 | 7.5 | 6.5e-14 | 0.03 | 0.01 | 0.99 | FALSE |
32 | GTEx | Breast Mammary Tissue | PGAP3 | 0.10 | 0.07 | lasso | 4 | 0.07 | 1.5e-04 | 9.52 | 8.1 | 4.6e-16 | 0.51 | 0.26 | 0.14 | FALSE |
33 | GTEx | Breast Mammary Tissue (Female) | SYNRG | 0.19 | 0.15 | lasso | 1 | 0.10 | 6.3e-04 | 5.76 | 5.8 | 8.4e-09 | 0.04 | 0.03 | 0.57 | FALSE |
34 | GTEx | Breast Mammary Tissue (Female) | PGAP3 | 0.10 | -0.01 | enet | 18 | 0.01 | 2.0e-01 | 10.14 | 5.3 | 9.9e-08 | 0.38 | 0.06 | 0.12 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | TADA2A | 0.34 | 0.25 | lasso | 8 | 0.29 | 1.1e-21 | 7.40 | 5.9 | 4.4e-09 | -0.01 | 0.01 | 0.99 | FALSE |
36 | GTEx | Cells Transformed fibroblasts | STARD3 | 0.08 | 0.01 | enet | 18 | 0.01 | 3.3e-02 | 12.57 | 7.4 | 1.7e-13 | 0.53 | 0.25 | 0.27 | FALSE |
37 | GTEx | Cells Transformed fibroblasts | DUSP14 | 0.13 | 0.01 | lasso | 4 | 0.05 | 8.9e-05 | 0.51 | 5.8 | 5.1e-09 | 0.01 | 0.02 | 0.90 | FALSE |
38 | GTEx | Colon Sigmoid | SYNRG | 0.31 | 0.31 | lasso | 3 | 0.28 | 2.9e-10 | 5.76 | 5.7 | 1.0e-08 | 0.04 | 0.15 | 0.85 | FALSE |
39 | GTEx | Colon Sigmoid | TADA2A | 0.38 | 0.11 | enet | 17 | 0.20 | 1.7e-07 | 7.50 | 6.6 | 4.9e-11 | 0.00 | 0.01 | 0.99 | FALSE |
40 | GTEx | Colon Transverse | SYNRG | 0.22 | 0.19 | enet | 6 | 0.21 | 3.1e-10 | 5.76 | 6.0 | 2.7e-09 | 0.04 | 0.25 | 0.75 | FALSE |
41 | GTEx | Colon Transverse | TADA2A | 0.21 | 0.18 | lasso | 3 | 0.16 | 4.7e-08 | 7.40 | 7.4 | 1.4e-13 | 0.04 | 0.01 | 0.99 | FALSE |
42 | GTEx | Colon Transverse | FBXL20 | 0.09 | 0.00 | enet | 26 | 0.06 | 7.8e-04 | 9.43 | -6.8 | 9.0e-12 | -0.57 | 0.06 | 0.56 | FALSE |
43 | GTEx | Colon Transverse | PGAP3 | 0.24 | 0.20 | enet | 19 | 0.20 | 8.3e-10 | 10.15 | 10.1 | 3.4e-24 | 0.67 | 0.80 | 0.20 | FALSE |
44 | GTEx | Esophagus Gastroesophageal Junction | SYNRG | 0.26 | 0.20 | lasso | 4 | 0.17 | 1.3e-06 | 5.76 | 5.6 | 2.0e-08 | 0.03 | 0.04 | 0.94 | FALSE |
45 | GTEx | Esophagus Gastroesophageal Junction | TADA2A | 0.27 | 0.25 | lasso | 2 | 0.24 | 4.8e-09 | 7.50 | 7.5 | 6.4e-14 | 0.03 | 0.01 | 0.99 | FALSE |
46 | GTEx | Esophagus Mucosa | SYNRG | 0.18 | 0.20 | enet | 8 | 0.19 | 1.5e-12 | 5.76 | 5.8 | 8.6e-09 | 0.02 | 0.30 | 0.70 | FALSE |
47 | GTEx | Esophagus Mucosa | TADA2A | 0.25 | 0.25 | enet | 10 | 0.26 | 1.3e-17 | 7.41 | 7.3 | 3.2e-13 | 0.04 | 0.01 | 0.99 | FALSE |
48 | GTEx | Esophagus Muscularis | SYNRG | 0.26 | 0.15 | enet | 21 | 0.16 | 5.6e-10 | 7.50 | 6.6 | 5.2e-11 | 0.00 | 0.01 | 0.99 | FALSE |
49 | GTEx | Esophagus Muscularis | TADA2A | 0.34 | 0.28 | lasso | 6 | 0.28 | 2.1e-17 | 7.50 | 7.2 | 4.2e-13 | 0.04 | 0.01 | 0.99 | FALSE |
50 | GTEx | Esophagus Muscularis | FBXL20 | 0.04 | 0.03 | lasso | 3 | 0.02 | 1.2e-02 | 9.56 | -11.4 | 3.4e-30 | -0.89 | 0.07 | 0.81 | FALSE |
51 | GTEx | Esophagus Muscularis | PGAP3 | 0.11 | 0.08 | enet | 10 | 0.10 | 1.1e-06 | 10.15 | 10.4 | 2.1e-25 | 0.67 | 0.88 | 0.09 | FALSE |
52 | GTEx | Heart Atrial Appendage | SYNRG | 0.22 | 0.19 | lasso | 7 | 0.18 | 2.4e-08 | 5.76 | 6.0 | 1.9e-09 | 0.04 | 0.02 | 0.98 | FALSE |
53 | GTEx | Heart Atrial Appendage | TADA2A | 0.23 | 0.09 | lasso | 10 | 0.10 | 2.0e-05 | 7.41 | 6.9 | 6.7e-12 | 0.05 | 0.01 | 0.98 | FALSE |
54 | GTEx | Heart Atrial Appendage | PPP1R1B | 0.09 | 0.04 | enet | 10 | 0.08 | 2.2e-04 | 1.93 | 6.0 | 2.4e-09 | 0.39 | 0.49 | 0.12 | FALSE |
55 | GTEx | Heart Atrial Appendage | ERBB2 | 0.13 | 0.04 | enet | 18 | 0.02 | 4.8e-02 | 9.57 | 6.1 | 9.2e-10 | 0.48 | 0.22 | 0.24 | FALSE |
56 | GTEx | Heart Atrial Appendage | PNMT | 0.14 | -0.01 | lasso | 8 | 0.00 | 5.3e-01 | -1.81 | 5.9 | 4.3e-09 | 0.53 | 0.11 | 0.50 | FALSE |
57 | GTEx | Heart Atrial Appendage | PGAP3 | 0.13 | 0.16 | lasso | 3 | 0.18 | 2.6e-08 | 8.50 | 9.1 | 7.7e-20 | 0.63 | 0.98 | 0.02 | FALSE |
58 | GTEx | Heart Left Ventricle | SYNRG | 0.16 | 0.19 | lasso | 1 | 0.16 | 1.3e-08 | 5.76 | 5.8 | 8.4e-09 | 0.04 | 0.27 | 0.73 | FALSE |
59 | GTEx | Heart Left Ventricle | TADA2A | 0.15 | 0.12 | lasso | 1 | 0.11 | 2.2e-06 | 7.25 | 7.2 | 4.3e-13 | 0.04 | 0.01 | 0.99 | FALSE |
60 | GTEx | Heart Left Ventricle | MED1 | 0.12 | 0.00 | enet | 12 | 0.04 | 5.0e-03 | 13.54 | 10.1 | 7.8e-24 | 0.67 | 0.04 | 0.75 | FALSE |
61 | GTEx | Heart Left Ventricle | PNMT | 0.06 | 0.03 | lasso | 1 | 0.03 | 1.3e-02 | 13.46 | 13.5 | 2.5e-41 | 0.96 | 0.05 | 0.85 | FALSE |
62 | GTEx | Heart Left Ventricle | PGAP3 | 0.17 | 0.14 | lasso | 5 | 0.12 | 4.3e-07 | 12.57 | 13.3 | 3.1e-40 | 0.77 | 0.42 | 0.57 | FALSE |
63 | GTEx | Liver | PGAP3 | 0.27 | 0.17 | lasso | 4 | 0.13 | 1.7e-04 | 9.02 | 8.0 | 1.8e-15 | 0.56 | 0.51 | 0.30 | FALSE |
64 | GTEx | Lung | SYNRG | 0.30 | 0.31 | lasso | 2 | 0.27 | 1.3e-20 | 5.76 | 5.5 | 3.1e-08 | 0.03 | 0.99 | 0.01 | FALSE |
65 | GTEx | Lung | GSDMB | 0.07 | 0.07 | lasso | 4 | 0.05 | 1.5e-04 | 3.34 | 5.7 | 1.4e-08 | 0.34 | 0.52 | 0.13 | FALSE |
66 | GTEx | Lung | TADA2A | 0.29 | 0.37 | lasso | 3 | 0.36 | 6.5e-29 | 7.53 | 7.5 | 4.7e-14 | 0.03 | 0.01 | 0.99 | FALSE |
67 | GTEx | Lung | PGAP3 | 0.24 | 0.14 | lasso | 7 | 0.12 | 2.3e-09 | 10.13 | 9.7 | 2.2e-22 | 0.66 | 0.99 | 0.01 | FALSE |
68 | GTEx | Muscle Skeletal | TADA2A | 0.28 | 0.23 | lasso | 6 | 0.22 | 2.5e-21 | 7.53 | 7.5 | 4.7e-14 | 0.04 | 0.01 | 0.99 | FALSE |
69 | GTEx | Muscle Skeletal | DUSP14 | 0.16 | 0.14 | lasso | 3 | 0.13 | 4.0e-13 | 7.50 | 7.6 | 4.1e-14 | 0.04 | 0.01 | 0.99 | FALSE |
70 | GTEx | Muscle Skeletal | PGAP3 | 0.04 | 0.03 | lasso | 5 | 0.04 | 1.3e-04 | 10.08 | 8.6 | 1.1e-17 | 0.56 | 0.44 | 0.35 | FALSE |
71 | GTEx | Nerve Tibial | SYNRG | 0.41 | 0.42 | lasso | 5 | 0.43 | 5.1e-33 | 5.76 | 5.3 | 8.8e-08 | 0.02 | 1.00 | 0.00 | FALSE |
72 | GTEx | Nerve Tibial | TADA2A | 0.40 | 0.37 | lasso | 3 | 0.37 | 1.8e-27 | 7.54 | 7.5 | 5.2e-14 | 0.03 | 0.01 | 0.99 | FALSE |
73 | GTEx | Nerve Tibial | ERBB2 | 0.08 | 0.08 | lasso | 5 | 0.07 | 1.3e-05 | 8.50 | 10.0 | 2.2e-23 | 0.70 | 0.76 | 0.22 | FALSE |
74 | GTEx | Nerve Tibial | DUSP14 | 0.25 | 0.21 | lasso | 4 | 0.27 | 4.4e-19 | -4.51 | 7.1 | 1.0e-12 | 0.06 | 0.60 | 0.40 | FALSE |
75 | GTEx | Nerve Tibial | PGAP3 | 0.19 | 0.11 | lasso | 5 | 0.12 | 1.1e-08 | 10.14 | 11.2 | 6.5e-29 | 0.72 | 0.98 | 0.02 | FALSE |
76 | GTEx | Ovary | SYNRG | 0.51 | 0.30 | lasso | 5 | 0.28 | 1.7e-07 | 5.76 | 5.8 | 5.5e-09 | 0.04 | 0.06 | 0.92 | FALSE |
77 | GTEx | Ovary | TADA2A | 0.27 | 0.25 | enet | 15 | 0.28 | 1.3e-07 | 7.54 | 7.4 | 1.7e-13 | 0.04 | 0.01 | 0.98 | FALSE |
78 | GTEx | Pancreas | SYNRG | 0.26 | 0.25 | lasso | 1 | 0.24 | 1.6e-10 | 5.76 | 5.8 | 8.4e-09 | 0.04 | 0.24 | 0.76 | FALSE |
79 | GTEx | Pancreas | TADA2A | 0.17 | 0.18 | lasso | 6 | 0.18 | 4.7e-08 | 7.54 | 7.5 | 4.9e-14 | 0.03 | 0.01 | 0.99 | FALSE |
80 | GTEx | Pancreas | DUSP14 | 0.27 | 0.19 | lasso | 4 | 0.17 | 8.7e-08 | 7.37 | 7.2 | 5.4e-13 | 0.04 | 0.01 | 0.99 | FALSE |
81 | GTEx | Pancreas | PGAP3 | 0.37 | 0.25 | lasso | 6 | 0.21 | 1.9e-09 | 9.02 | 8.0 | 1.0e-15 | 0.59 | 0.96 | 0.04 | FALSE |
82 | GTEx | Pituitary | TADA2A | 0.39 | 0.02 | lasso | 4 | 0.05 | 2.0e-02 | 7.65 | 8.2 | 3.0e-16 | 0.02 | 0.01 | 0.77 | TRUE |
83 | GTEx | Pituitary | PGAP3 | 0.15 | 0.22 | lasso | 2 | 0.19 | 1.8e-05 | 9.57 | 9.5 | 1.7e-21 | 0.61 | 0.32 | 0.11 | FALSE |
84 | GTEx | Prostate | SYNRG | 0.49 | 0.34 | lasso | 5 | 0.33 | 5.1e-09 | 5.76 | 5.7 | 1.0e-08 | 0.05 | 0.12 | 0.86 | FALSE |
85 | GTEx | Prostate | PGAP3 | 0.23 | 0.03 | enet | 26 | 0.06 | 1.6e-02 | 10.13 | 9.5 | 1.5e-21 | 0.69 | 0.12 | 0.51 | FALSE |
86 | GTEx | Skin Not Sun Exposed Suprapubic | SYNRG | 0.35 | 0.27 | enet | 14 | 0.30 | 6.7e-17 | 5.76 | 5.5 | 3.5e-08 | 0.01 | 0.52 | 0.48 | FALSE |
87 | GTEx | Skin Not Sun Exposed Suprapubic | TADA2A | 0.33 | 0.31 | lasso | 5 | 0.35 | 4.1e-20 | 7.54 | 6.8 | 8.7e-12 | 0.01 | 0.01 | 0.99 | FALSE |
88 | GTEx | Skin Not Sun Exposed Suprapubic | PGAP3 | 0.22 | 0.09 | enet | 33 | 0.14 | 3.4e-08 | 10.15 | 9.8 | 1.7e-22 | 0.59 | 0.98 | 0.01 | TRUE |
89 | GTEx | Skin Not Sun Exposed Suprapubic | TCAP | 0.07 | 0.02 | enet | 7 | 0.01 | 1.2e-01 | 8.58 | 9.5 | 2.3e-21 | 0.63 | 0.13 | 0.19 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | SYNRG | 0.32 | 0.26 | lasso | 4 | 0.27 | 1.7e-22 | 5.76 | 5.6 | 1.7e-08 | 0.04 | 0.91 | 0.09 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | TADA2A | 0.28 | 0.24 | lasso | 4 | 0.26 | 4.5e-21 | 7.54 | 7.1 | 1.5e-12 | 0.02 | 0.01 | 0.99 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | ERBB2 | 0.10 | 0.01 | enet | 8 | 0.01 | 3.5e-02 | 8.52 | 8.2 | 2.9e-16 | 0.62 | 0.35 | 0.13 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | PGAP3 | 0.14 | 0.10 | lasso | 6 | 0.07 | 1.1e-06 | 9.02 | 11.0 | 2.3e-28 | 0.71 | 0.99 | 0.01 | FALSE |
94 | GTEx | Skin Sun Exposed Lower leg | ORMDL3 | 0.04 | 0.02 | lasso | 5 | 0.01 | 1.1e-01 | 12.57 | 11.4 | 5.5e-30 | 0.71 | 0.13 | 0.20 | FALSE |
95 | GTEx | Small Intestine Terminal Ileum | FBXL20 | 0.32 | 0.32 | lasso | 5 | 0.27 | 1.1e-06 | 11.75 | -11.8 | 3.3e-32 | -0.92 | 0.07 | 0.90 | FALSE |
96 | GTEx | Small Intestine Terminal Ileum | RP11-690G19.3 | 0.21 | 0.24 | lasso | 2 | 0.24 | 5.3e-06 | 11.75 | -11.9 | 7.7e-33 | -0.91 | 0.05 | 0.88 | FALSE |
97 | GTEx | Spleen | TADA2A | 0.41 | 0.27 | lasso | 10 | 0.26 | 2.7e-07 | 7.54 | 7.0 | 2.2e-12 | 0.04 | 0.01 | 0.99 | FALSE |
98 | GTEx | Spleen | DUSP14 | 0.25 | 0.14 | lasso | 5 | 0.13 | 4.0e-04 | 7.54 | 7.5 | 5.3e-14 | 0.04 | 0.01 | 0.92 | FALSE |
99 | GTEx | Spleen | PLXDC1 | 0.43 | 0.05 | enet | 22 | 0.12 | 7.1e-04 | 1.66 | -6.7 | 2.5e-11 | -0.20 | 0.06 | 0.12 | TRUE |
100 | GTEx | Stomach | SYNRG | 0.30 | 0.06 | enet | 61 | 0.05 | 1.4e-03 | 5.76 | 5.5 | 3.7e-08 | 0.01 | 0.01 | 0.97 | FALSE |
101 | GTEx | Stomach | TADA2A | 0.35 | 0.25 | lasso | 6 | 0.24 | 6.3e-12 | 7.54 | 7.7 | 1.6e-14 | 0.03 | 0.01 | 0.99 | FALSE |
102 | GTEx | Stomach | PGAP3 | 0.41 | 0.18 | enet | 16 | 0.25 | 2.3e-12 | 10.13 | 9.3 | 1.7e-20 | 0.51 | 0.99 | 0.01 | FALSE |
103 | GTEx | Testis | TADA2A | 0.27 | 0.19 | lasso | 7 | 0.18 | 2.6e-08 | 7.53 | 7.0 | 2.0e-12 | 0.02 | 0.01 | 0.99 | FALSE |
104 | GTEx | Testis | DUSP14 | 0.18 | 0.07 | lasso | 8 | 0.10 | 4.1e-05 | -4.90 | 7.0 | 2.5e-12 | 0.05 | 0.11 | 0.83 | FALSE |
105 | GTEx | Thyroid | SYNRG | 0.39 | 0.35 | lasso | 5 | 0.38 | 3.1e-30 | 5.76 | 5.4 | 8.2e-08 | 0.04 | 1.00 | 0.00 | FALSE |
106 | GTEx | Thyroid | TADA2A | 0.23 | 0.26 | lasso | 1 | 0.25 | 3.3e-19 | 7.53 | 7.5 | 5.1e-14 | 0.03 | 0.01 | 0.99 | FALSE |
107 | GTEx | Thyroid | PGAP3 | 0.19 | 0.21 | lasso | 10 | 0.24 | 3.5e-18 | 7.64 | 8.0 | 1.6e-15 | 0.59 | 1.00 | 0.00 | FALSE |
108 | GTEx | Thyroid | RP11-690G19.3 | 0.04 | 0.03 | enet | 6 | 0.02 | 1.5e-02 | 9.69 | -11.4 | 6.1e-30 | -0.70 | 0.07 | 0.78 | FALSE |
109 | GTEx | Vagina | SYNRG | 0.46 | 0.26 | lasso | 4 | 0.23 | 4.8e-06 | 4.51 | 5.3 | 1.4e-07 | 0.05 | 0.06 | 0.83 | FALSE |
110 | GTEx | Vagina | TADA2A | 0.48 | 0.39 | lasso | 5 | 0.40 | 4.0e-10 | 7.54 | 7.5 | 7.1e-14 | 0.03 | 0.01 | 0.99 | FALSE |
111 | GTEx | Whole Blood | TADA2A | 0.16 | 0.09 | lasso | 1 | 0.10 | 2.9e-09 | 7.40 | 7.4 | 1.3e-13 | 0.04 | 0.02 | 0.98 | FALSE |
112 | GTEx | Whole Blood | DUSP14 | 0.16 | 0.16 | lasso | 5 | 0.14 | 6.9e-13 | 7.40 | 7.4 | 1.3e-13 | 0.04 | 0.02 | 0.98 | FALSE |
113 | METSIM | Adipose | DUSP14 | 0.05 | 0.01 | bslmm | 329 | 0.02 | 3.7e-04 | 7.54 | 6.6 | 4.7e-11 | 0.09 | 0.02 | 0.90 | FALSE |
114 | METSIM | Adipose | GSDMB | 0.08 | 0.04 | enet | 15 | 0.05 | 6.2e-08 | -5.13 | 8.1 | 3.9e-16 | 0.29 | 0.99 | 0.00 | FALSE |
115 | METSIM | Adipose | PGAP3 | 0.06 | 0.05 | lasso | 4 | 0.05 | 8.8e-08 | 9.02 | 11.0 | 4.4e-28 | 0.72 | 0.85 | 0.15 | FALSE |
116 | METSIM | Adipose | TADA2A | 0.20 | 0.21 | bslmm | 353 | 0.21 | 3.2e-31 | 7.25 | 6.3 | 3.3e-10 | 0.03 | 0.01 | 0.99 | FALSE |
117 | NTR | Blood | TADA2A | 0.02 | 0.01 | enet | 18 | 0.01 | 3.0e-04 | 7.54 | 6.9 | 4.6e-12 | 0.00 | 0.01 | 0.99 | FALSE |
118 | YFS | Blood | ACACA | 0.03 | 0.00 | enet | 15 | 0.01 | 1.3e-03 | 2.01 | -5.2 | 2.5e-07 | -0.03 | 0.03 | 0.94 | FALSE |
119 | YFS | Blood | DUSP14 | 0.40 | 0.43 | enet | 24 | 0.55 | 3.5e-221 | 7.50 | 7.9 | 2.3e-15 | 0.06 | 0.01 | 0.99 | FALSE |
120 | YFS | Blood | FBXL20 | 0.05 | 0.10 | lasso | 15 | 0.10 | 6.5e-30 | 13.70 | 13.6 | 3.6e-42 | 0.97 | 0.04 | 0.96 | TRUE |
121 | YFS | Blood | PGAP3 | 0.08 | 0.12 | lasso | 11 | 0.12 | 1.7e-35 | 10.02 | 10.3 | 7.3e-25 | 0.65 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PGAP3 | 0.07 | 0.12 | blup | 37 | 0.11 | 1.2e-09 | 10.14 | 10.2 | 1.8e-24 | 0.67 | 0.54 | 0.46 | FALSE |
123 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | TADA2A | 0.05 | 0.04 | blup | 54 | 0.04 | 5.7e-04 | 7.54 | 5.4 | 7.0e-08 | -0.01 | 0.01 | 0.96 | FALSE |
124 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PGAP3 | 0.08 | 0.07 | blup | 41 | 0.08 | 2.7e-16 | 9.02 | 5.3 | 1.4e-07 | 0.42 | 1.00 | 0.00 | FALSE |
125 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SYNRG | 0.01 | 0.00 | blup | 57 | 0.00 | 1.2e-01 | -4.05 | -5.5 | 4.7e-08 | -0.07 | 0.02 | 0.12 | FALSE |
126 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PGAP3 | 0.04 | 0.01 | blup | 41 | 0.01 | 1.2e-01 | 10.14 | 11.2 | 5.7e-29 | 0.71 | 0.01 | 0.81 | FALSE |
127 | The Cancer Genome Atlas | Colon Adenocarcinoma | DUSP14 | 0.07 | 0.02 | lasso | 6 | 0.04 | 1.9e-03 | 7.50 | 8.0 | 1.7e-15 | 0.06 | 0.01 | 0.92 | FALSE |
128 | The Cancer Genome Atlas | Colon Adenocarcinoma | PGAP3 | 0.10 | 0.17 | blup | 37 | 0.17 | 6.4e-10 | 9.02 | 9.9 | 5.6e-23 | 0.66 | 0.28 | 0.72 | FALSE |
129 | The Cancer Genome Atlas | Glioblastoma Multiforme | DUSP14 | 0.22 | 0.21 | lasso | 3 | 0.20 | 1.2e-06 | 7.25 | 7.2 | 8.1e-13 | 0.05 | 0.01 | 0.99 | FALSE |
130 | The Cancer Genome Atlas | Glioblastoma Multiforme | PGAP3 | 0.19 | 0.13 | blup | 37 | 0.16 | 1.5e-05 | 9.02 | 10.1 | 7.0e-24 | 0.68 | 0.02 | 0.95 | FALSE |
131 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PGAP3 | 0.04 | 0.08 | lasso | 1 | 0.07 | 1.5e-08 | 9.02 | 9.0 | 1.9e-19 | 0.63 | 0.26 | 0.74 | FALSE |
132 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | STARD3 | 0.03 | 0.04 | enet | 5 | 0.02 | 8.2e-04 | 13.52 | 13.5 | 2.0e-41 | 0.75 | 0.00 | 1.00 | TRUE |
133 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DUSP14 | 0.05 | 0.04 | lasso | 2 | 0.05 | 9.1e-07 | 7.50 | 7.3 | 2.7e-13 | 0.06 | 0.01 | 0.99 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MED1 | 0.03 | 0.02 | blup | 29 | 0.02 | 1.0e-03 | 13.56 | 13.0 | 1.4e-38 | 0.97 | 0.01 | 0.98 | FALSE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PGAP3 | 0.12 | 0.12 | lasso | 4 | 0.13 | 5.3e-14 | 9.02 | 8.1 | 4.7e-16 | 0.59 | 0.98 | 0.02 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | DUSP14 | 0.09 | 0.11 | lasso | 5 | 0.10 | 3.7e-06 | 7.65 | 7.7 | 1.2e-14 | 0.04 | 0.00 | 0.99 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PGAP3 | 0.16 | 0.16 | enet | 14 | 0.15 | 5.1e-09 | 9.02 | 6.5 | 6.9e-11 | 0.49 | 0.05 | 0.95 | FALSE |
138 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DUSP14 | 0.13 | 0.08 | blup | 42 | 0.13 | 1.6e-14 | 7.25 | 6.2 | 4.1e-10 | 0.06 | 0.01 | 0.99 | FALSE |
139 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PGAP3 | 0.05 | 0.08 | lasso | 10 | 0.08 | 2.1e-09 | 9.02 | 9.4 | 7.8e-21 | 0.64 | 0.40 | 0.60 | FALSE |
140 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | PGAP3 | 0.09 | 0.11 | lasso | 4 | 0.11 | 5.9e-06 | 9.52 | 9.7 | 2.0e-22 | 0.66 | 0.07 | 0.91 | FALSE |
141 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | TADA2A | 0.09 | 0.06 | blup | 54 | 0.04 | 6.6e-03 | 7.41 | 5.4 | 5.8e-08 | 0.03 | 0.01 | 0.94 | FALSE |
142 | The Cancer Genome Atlas | Lung Adenocarcinoma | DUSP14 | 0.05 | 0.05 | lasso | 4 | 0.04 | 1.6e-05 | 7.41 | 7.4 | 1.8e-13 | 0.04 | 0.01 | 0.99 | FALSE |
143 | The Cancer Genome Atlas | Lung Adenocarcinoma | PGAP3 | 0.06 | 0.06 | lasso | 4 | 0.06 | 4.5e-07 | 7.84 | 8.3 | 1.2e-16 | 0.59 | 0.35 | 0.65 | FALSE |
144 | The Cancer Genome Atlas | Lung Adenocarcinoma | PNMT | 0.03 | 0.01 | blup | 41 | 0.01 | 9.2e-03 | 4.60 | -5.4 | 7.0e-08 | -0.33 | 0.03 | 0.17 | FALSE |
145 | The Cancer Genome Atlas | Lung Adenocarcinoma | STARD3 | 0.05 | 0.02 | blup | 50 | 0.02 | 1.1e-03 | 7.84 | 5.3 | 1.0e-07 | 0.40 | 0.10 | 0.37 | FALSE |
146 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | DUSP14 | 0.05 | 0.00 | enet | 9 | 0.02 | 2.4e-03 | -2.00 | 6.0 | 2.4e-09 | 0.05 | 0.01 | 0.40 | FALSE |
147 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PGAP3 | 0.06 | 0.10 | lasso | 2 | 0.09 | 1.5e-10 | 9.02 | 9.1 | 8.0e-20 | 0.63 | 0.14 | 0.86 | FALSE |
148 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | STARD3 | 0.03 | 0.03 | enet | 8 | 0.04 | 6.6e-05 | 8.52 | 10.1 | 7.8e-24 | 0.68 | 0.18 | 0.72 | FALSE |
149 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | DUSP14 | 0.08 | 0.05 | blup | 42 | 0.05 | 2.4e-04 | 7.53 | 5.8 | 4.9e-09 | 0.01 | 0.01 | 0.95 | FALSE |
150 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | PGAP3 | 0.07 | 0.10 | lasso | 2 | 0.08 | 3.7e-04 | 9.69 | 9.7 | 2.6e-22 | 0.55 | 0.06 | 0.46 | FALSE |
151 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | PGAP3 | 0.17 | 0.13 | blup | 41 | 0.10 | 6.8e-05 | 7.84 | 6.6 | 3.6e-11 | 0.52 | 0.24 | 0.51 | FALSE |
152 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TADA2A | 0.12 | 0.07 | blup | 54 | 0.07 | 1.2e-03 | 7.25 | 6.0 | 1.9e-09 | 0.00 | 0.01 | 0.92 | FALSE |
153 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DUSP14 | 0.10 | 0.19 | lasso | 4 | 0.19 | 3.5e-19 | 7.37 | 7.5 | 8.6e-14 | 0.04 | 0.01 | 0.99 | FALSE |
154 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PGAP3 | 0.18 | 0.26 | enet | 12 | 0.28 | 5.7e-30 | 9.02 | 8.9 | 5.0e-19 | 0.63 | 0.92 | 0.08 | FALSE |
155 | The Cancer Genome Atlas | Prostate Adenocarcinoma | STARD3 | 0.05 | 0.04 | blup | 50 | 0.05 | 9.8e-06 | 10.08 | 7.7 | 1.7e-14 | 0.54 | 0.57 | 0.34 | FALSE |
156 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SYNRG | 0.04 | 0.02 | blup | 58 | 0.03 | 2.0e-04 | 4.51 | -5.7 | 1.1e-08 | -0.04 | 0.02 | 0.92 | FALSE |
157 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CDK12 | 0.17 | 0.00 | blup | 44 | 0.05 | 2.5e-02 | 13.44 | 13.3 | 1.5e-40 | 0.97 | 0.01 | 0.40 | FALSE |
158 | The Cancer Genome Atlas | Rectum Adenocarcinoma | DUSP14 | 0.26 | 0.06 | enet | 19 | 0.09 | 3.4e-03 | 7.50 | 5.6 | 2.5e-08 | 0.05 | 0.01 | 0.60 | FALSE |
159 | The Cancer Genome Atlas | Rectum Adenocarcinoma | PGAP3 | 0.20 | 0.14 | blup | 38 | 0.16 | 1.4e-04 | 9.52 | 10.9 | 1.6e-27 | 0.69 | 0.01 | 0.84 | FALSE |
160 | The Cancer Genome Atlas | Soft Tissue Sarcoma | DUSP14 | 0.08 | 0.00 | blup | 42 | 0.03 | 8.7e-03 | 4.51 | 5.5 | 3.1e-08 | 0.02 | 0.01 | 0.48 | FALSE |
161 | The Cancer Genome Atlas | Stomach Adenocarcinoma | DUSP14 | 0.08 | 0.04 | enet | 12 | 0.05 | 1.0e-04 | 7.41 | 5.2 | 1.8e-07 | 0.07 | 0.01 | 0.98 | FALSE |
162 | The Cancer Genome Atlas | Stomach Adenocarcinoma | IKZF3 | 0.03 | 0.01 | blup | 43 | 0.02 | 1.3e-02 | 3.88 | -5.5 | 4.1e-08 | -0.28 | 0.04 | 0.04 | TRUE |
163 | The Cancer Genome Atlas | Stomach Adenocarcinoma | PGAP3 | 0.05 | 0.05 | lasso | 4 | 0.05 | 1.0e-04 | 8.56 | 10.6 | 2.7e-26 | 0.67 | 0.02 | 0.94 | FALSE |
164 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PGAP3 | 0.23 | 0.22 | blup | 38 | 0.24 | 3.6e-09 | 12.60 | 11.4 | 6.7e-30 | 0.72 | 0.01 | 0.99 | FALSE |
165 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PNMT | 0.07 | 0.14 | lasso | 1 | 0.10 | 1.5e-04 | 9.69 | 9.7 | 3.3e-22 | 0.55 | 0.10 | 0.47 | FALSE |
166 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | STARD3 | 0.05 | 0.06 | lasso | 2 | 0.04 | 1.7e-02 | 10.14 | 12.4 | 1.6e-35 | 0.71 | 0.03 | 0.50 | FALSE |
167 | The Cancer Genome Atlas | Thyroid Carcinoma | C17orf37 | 0.03 | 0.01 | blup | 19 | 0.01 | 4.5e-02 | -5.06 | 7.7 | 1.6e-14 | 0.31 | 0.01 | 0.08 | TRUE |
168 | The Cancer Genome Atlas | Thyroid Carcinoma | DUSP14 | 0.06 | 0.06 | enet | 4 | 0.06 | 1.7e-06 | 7.25 | 5.8 | 8.3e-09 | -0.01 | 0.01 | 0.98 | FALSE |
169 | The Cancer Genome Atlas | Thyroid Carcinoma | PGAP3 | 0.10 | 0.16 | lasso | 5 | 0.17 | 1.4e-16 | 9.02 | 10.6 | 3.2e-26 | 0.69 | 0.07 | 0.93 | FALSE |
170 | The Cancer Genome Atlas | Thyroid Carcinoma | PNMT | 0.03 | 0.05 | lasso | 4 | 0.04 | 6.2e-05 | 9.69 | 9.9 | 4.6e-23 | 0.58 | 0.47 | 0.19 | FALSE |
171 | The Cancer Genome Atlas | Thyroid Carcinoma | STARD3 | 0.10 | 0.06 | lasso | 5 | 0.05 | 2.6e-05 | 8.64 | 8.4 | 6.2e-17 | 0.58 | 0.76 | 0.12 | FALSE |
172 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | DUSP14 | 0.15 | 0.11 | enet | 4 | 0.12 | 3.2e-04 | 4.51 | 6.4 | 1.6e-10 | 0.04 | 0.01 | 0.97 | FALSE |