Best TWAS P=2.67e-52 · Best GWAS P=2.6e-65 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | POLR2E | 0.23 | 0.14 | bslmm | 451 | 0.17 | 5.2e-20 | -5.06 | -5.1 | 2.9e-07 | 0.05 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | SHD | 0.07 | 0.01 | bslmm | 377 | 0.01 | 5.1e-02 | 0.39 | 5.1 | 2.8e-07 | 0.21 | 0.20 | 0.08 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | UBXN6 | 0.27 | 0.25 | enet | 28 | 0.29 | 4.6e-36 | 7.93 | -9.1 | 7.4e-20 | -0.08 | 1.00 | 0.00 | FALSE |
4 | GTEx | Adipose Subcutaneous | CHAF1A | 0.26 | 0.21 | enet | 14 | 0.28 | 2.2e-23 | 8.70 | -6.0 | 1.8e-09 | -0.05 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | UBXN6 | 0.10 | 0.00 | enet | 21 | 0.02 | 8.0e-03 | -9.02 | -7.7 | 1.3e-14 | -0.03 | 0.26 | 0.05 | TRUE |
6 | GTEx | Adipose Subcutaneous | CTB-50L17.9 | 0.29 | 0.30 | lasso | 2 | 0.30 | 2.3e-24 | 7.84 | -7.9 | 4.0e-15 | -0.06 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Visceral Omentum | CHAF1A | 0.24 | 0.26 | lasso | 3 | 0.26 | 6.2e-14 | 8.70 | -8.3 | 7.5e-17 | -0.08 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Visceral Omentum | CTB-50L17.9 | 0.30 | 0.23 | lasso | 4 | 0.22 | 2.1e-11 | 7.84 | -7.3 | 1.9e-13 | -0.06 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adrenal Gland | CHAF1A | 0.22 | 0.18 | lasso | 3 | 0.17 | 1.1e-06 | 7.72 | -8.2 | 1.6e-16 | -0.07 | 0.77 | 0.01 | FALSE |
10 | GTEx | Adrenal Gland | CTB-50L17.5 | 0.20 | 0.07 | lasso | 3 | 0.14 | 9.0e-06 | 8.70 | -5.4 | 6.6e-08 | -0.05 | 0.23 | 0.04 | FALSE |
11 | GTEx | Adrenal Gland | CTB-50L17.9 | 0.38 | 0.35 | lasso | 3 | 0.34 | 5.8e-13 | 7.84 | -7.8 | 4.7e-15 | -0.06 | 1.00 | 0.00 | FALSE |
12 | GTEx | Adrenal Gland | AC007292.6 | 0.24 | 0.14 | lasso | 4 | 0.07 | 2.0e-03 | 7.93 | -7.7 | 1.9e-14 | -0.09 | 0.27 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | MPND | 0.14 | 0.06 | lasso | 2 | 0.03 | 6.7e-03 | 7.84 | 7.8 | 7.0e-15 | 0.07 | 0.19 | 0.23 | FALSE |
14 | GTEx | Artery Aorta | AP3D1 | 0.27 | 0.12 | lasso | 3 | 0.13 | 1.3e-07 | -7.21 | 7.2 | 7.4e-13 | 0.04 | 0.96 | 0.00 | FALSE |
15 | GTEx | Artery Aorta | POLR2E | 0.36 | 0.10 | lasso | 5 | 0.30 | 3.7e-17 | -3.29 | -5.4 | 6.5e-08 | 0.02 | 0.99 | 0.00 | FALSE |
16 | GTEx | Artery Aorta | EEF2 | 0.12 | 0.00 | enet | 7 | 0.00 | 5.1e-01 | 2.26 | -7.2 | 5.5e-13 | -0.22 | 0.09 | 0.04 | TRUE |
17 | GTEx | Artery Aorta | CHAF1A | 0.29 | 0.33 | lasso | 3 | 0.34 | 2.4e-19 | 8.70 | -8.0 | 1.7e-15 | -0.07 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Aorta | UBXN6 | 0.13 | 0.02 | lasso | 5 | 0.03 | 5.7e-03 | -8.93 | -10.4 | 1.9e-25 | -0.08 | 0.48 | 0.02 | FALSE |
19 | GTEx | Artery Aorta | CTB-50L17.5 | 0.16 | 0.15 | lasso | 7 | 0.15 | 1.0e-08 | 9.01 | -8.8 | 2.1e-18 | -0.08 | 1.00 | 0.00 | FALSE |
20 | GTEx | Artery Aorta | CTB-50L17.9 | 0.32 | 0.31 | lasso | 4 | 0.30 | 2.9e-17 | 7.84 | -8.0 | 9.4e-16 | -0.07 | 1.00 | 0.00 | FALSE |
21 | GTEx | Artery Coronary | CTB-50L17.9 | 0.43 | 0.14 | lasso | 6 | 0.12 | 6.5e-05 | 7.84 | -5.5 | 4.7e-08 | 0.03 | 0.19 | 0.17 | FALSE |
22 | GTEx | Artery Tibial | AP3D1 | 0.17 | 0.16 | lasso | 3 | 0.16 | 2.1e-12 | -6.52 | 6.7 | 1.7e-11 | 0.06 | 1.00 | 0.00 | FALSE |
23 | GTEx | Artery Tibial | POLR2E | 0.35 | 0.26 | enet | 19 | 0.27 | 2.5e-21 | -4.42 | -5.8 | 5.2e-09 | 0.04 | 1.00 | 0.00 | TRUE |
24 | GTEx | Artery Tibial | DOT1L | 0.09 | 0.06 | lasso | 5 | 0.05 | 7.3e-05 | 13.50 | 12.9 | 7.4e-38 | -0.04 | 0.03 | 0.97 | TRUE |
25 | GTEx | Artery Tibial | CHAF1A | 0.39 | 0.37 | lasso | 7 | 0.39 | 1.2e-32 | 8.70 | -7.6 | 2.9e-14 | -0.07 | 1.00 | 0.00 | FALSE |
26 | GTEx | Artery Tibial | UBXN6 | 0.18 | 0.07 | lasso | 3 | 0.14 | 6.3e-11 | 8.97 | -10.7 | 1.0e-26 | -0.07 | 1.00 | 0.00 | FALSE |
27 | GTEx | Artery Tibial | CTB-50L17.5 | 0.23 | 0.13 | lasso | 4 | 0.11 | 4.1e-09 | 9.01 | -7.4 | 1.3e-13 | -0.07 | 1.00 | 0.00 | FALSE |
28 | GTEx | Artery Tibial | AC004623.2 | 0.13 | 0.05 | lasso | 3 | 0.05 | 5.2e-05 | 6.16 | -6.1 | 8.0e-10 | 0.02 | 0.51 | 0.46 | TRUE |
29 | GTEx | Artery Tibial | CTB-50L17.9 | 0.27 | 0.31 | lasso | 3 | 0.31 | 2.2e-24 | 7.84 | -7.9 | 2.3e-15 | -0.06 | 1.00 | 0.00 | FALSE |
30 | GTEx | Artery Tibial | AC007292.6 | 0.13 | 0.07 | lasso | 2 | 0.06 | 3.4e-05 | 7.84 | -6.8 | 1.1e-11 | -0.05 | 0.49 | 0.05 | FALSE |
31 | GTEx | Brain Caudate basal ganglia | CTB-50L17.9 | 0.27 | 0.25 | lasso | 2 | 0.24 | 1.8e-07 | 9.01 | -8.4 | 4.6e-17 | -0.08 | 0.42 | 0.04 | FALSE |
32 | GTEx | Brain Cerebellar Hemisphere | CHAF1A | 0.62 | 0.40 | lasso | 8 | 0.36 | 3.5e-10 | 9.01 | -9.0 | 3.3e-19 | -0.09 | 0.98 | 0.00 | FALSE |
33 | GTEx | Brain Cerebellar Hemisphere | CTB-50L17.5 | 0.41 | 0.03 | enet | 17 | 0.09 | 3.3e-03 | 8.70 | -7.3 | 3.1e-13 | -0.06 | 0.19 | 0.10 | FALSE |
34 | GTEx | Brain Cerebellar Hemisphere | CTB-50L17.9 | 0.61 | 0.45 | lasso | 2 | 0.50 | 1.2e-14 | 7.84 | -8.0 | 1.7e-15 | -0.07 | 1.00 | 0.00 | FALSE |
35 | GTEx | Brain Cerebellar Hemisphere | AC007292.6 | 0.28 | 0.11 | lasso | 5 | 0.18 | 2.0e-05 | 7.72 | -6.4 | 1.6e-10 | -0.04 | 0.35 | 0.04 | FALSE |
36 | GTEx | Brain Cerebellum | CHAF1A | 0.51 | 0.35 | lasso | 4 | 0.34 | 9.7e-11 | 9.01 | -9.0 | 2.0e-19 | -0.08 | 0.99 | 0.00 | FALSE |
37 | GTEx | Brain Cerebellum | CTB-50L17.5 | 0.33 | 0.22 | lasso | 4 | 0.20 | 1.8e-06 | 7.84 | -8.0 | 1.2e-15 | -0.06 | 0.81 | 0.02 | FALSE |
38 | GTEx | Brain Cerebellum | CTB-50L17.9 | 0.53 | 0.41 | lasso | 2 | 0.50 | 3.6e-17 | 7.84 | -9.2 | 5.2e-20 | -0.08 | 1.00 | 0.00 | FALSE |
39 | GTEx | Brain Cortex | CTB-50L17.9 | 0.28 | 0.25 | lasso | 2 | 0.25 | 1.7e-07 | 7.84 | -7.9 | 2.4e-15 | -0.06 | 0.69 | 0.02 | FALSE |
40 | GTEx | Brain Frontal Cortex BA9 | UBXN6 | 0.31 | 0.06 | enet | 5 | 0.12 | 3.5e-04 | 7.84 | -8.4 | 4.3e-17 | -0.06 | 0.15 | 0.14 | FALSE |
41 | GTEx | Brain Frontal Cortex BA9 | CTB-50L17.9 | 0.27 | 0.21 | lasso | 3 | 0.19 | 7.9e-06 | 7.84 | -9.0 | 3.1e-19 | -0.07 | 0.53 | 0.04 | FALSE |
42 | GTEx | Brain Frontal Cortex BA9 | AC007292.6 | 0.35 | 0.01 | lasso | 6 | 0.12 | 3.6e-04 | -2.23 | -8.8 | 1.2e-18 | 0.03 | 0.07 | 0.06 | FALSE |
43 | GTEx | Brain Hypothalamus | CTB-50L17.9 | 0.44 | 0.26 | lasso | 4 | 0.24 | 2.8e-06 | 7.84 | -7.7 | 1.3e-14 | -0.06 | 0.18 | 0.05 | FALSE |
44 | GTEx | Brain Nucleus accumbens basal ganglia | CHAF1A | 0.31 | 0.28 | lasso | 2 | 0.24 | 4.0e-07 | 8.70 | -8.7 | 5.0e-18 | -0.08 | 0.57 | 0.03 | FALSE |
45 | GTEx | Brain Nucleus accumbens basal ganglia | CTB-50L17.9 | 0.45 | 0.25 | lasso | 8 | 0.23 | 8.6e-07 | 9.01 | -9.8 | 7.6e-23 | -0.06 | 0.58 | 0.04 | FALSE |
46 | GTEx | Brain Putamen basal ganglia | CHAF1A | 0.40 | 0.34 | lasso | 4 | 0.37 | 1.2e-09 | 9.01 | -8.1 | 6.5e-16 | -0.08 | 0.50 | 0.05 | FALSE |
47 | GTEx | Brain Putamen basal ganglia | CTB-50L17.9 | 0.33 | 0.32 | lasso | 1 | 0.33 | 1.2e-08 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 0.58 | 0.04 | FALSE |
48 | GTEx | Breast Mammary Tissue | CHAF1A | 0.39 | 0.25 | enet | 25 | 0.26 | 7.1e-14 | 8.01 | -7.0 | 1.9e-12 | -0.07 | 1.00 | 0.00 | FALSE |
49 | GTEx | Breast Mammary Tissue | CTB-50L17.5 | 0.26 | 0.15 | enet | 24 | 0.14 | 9.1e-08 | 7.93 | -5.8 | 7.9e-09 | -0.08 | 0.99 | 0.00 | FALSE |
50 | GTEx | Breast Mammary Tissue | CTB-50L17.9 | 0.42 | 0.33 | lasso | 9 | 0.32 | 3.0e-17 | 7.84 | -8.2 | 2.0e-16 | -0.07 | 1.00 | 0.00 | FALSE |
51 | GTEx | Breast Mammary Tissue (Male) | CHAF1A | 0.20 | -0.01 | lasso | 12 | 0.00 | 4.2e-01 | 7.93 | -7.2 | 7.6e-13 | -0.06 | 0.07 | 0.14 | FALSE |
52 | GTEx | Breast Mammary Tissue (Male) | CTB-50L17.9 | 0.30 | 0.18 | lasso | 4 | 0.10 | 2.3e-03 | 7.84 | -7.8 | 7.9e-15 | -0.06 | 0.07 | 0.05 | FALSE |
53 | GTEx | Breast Mammary Tissue (Female) | CHAF1A | 0.33 | 0.14 | lasso | 6 | 0.09 | 1.6e-03 | 8.70 | -8.2 | 2.7e-16 | -0.08 | 0.35 | 0.06 | FALSE |
54 | GTEx | Breast Mammary Tissue (Female) | CTB-50L17.5 | 0.24 | 0.03 | lasso | 5 | 0.02 | 6.0e-02 | 7.72 | -7.4 | 1.7e-13 | -0.03 | 0.06 | 0.05 | FALSE |
55 | GTEx | Breast Mammary Tissue (Female) | CTB-50L17.9 | 0.45 | 0.25 | lasso | 7 | 0.26 | 1.6e-08 | 8.01 | -7.7 | 1.7e-14 | -0.06 | 0.81 | 0.01 | FALSE |
56 | GTEx | Cells EBV-transformed lymphocytes | PIP5K1C | 0.25 | 0.14 | lasso | 4 | 0.18 | 1.8e-06 | 0.23 | 6.6 | 4.0e-11 | 0.32 | 0.26 | 0.07 | FALSE |
57 | GTEx | Cells EBV-transformed lymphocytes | CTB-50L17.9 | 0.31 | 0.27 | lasso | 1 | 0.23 | 3.6e-08 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 0.92 | 0.00 | FALSE |
58 | GTEx | Cells Transformed fibroblasts | UBXN6 | 0.09 | 0.10 | lasso | 1 | 0.08 | 1.5e-06 | -8.93 | -8.9 | 4.4e-19 | -0.08 | 0.91 | 0.01 | TRUE |
59 | GTEx | Cells Transformed fibroblasts | CTB-50L17.9 | 0.17 | 0.16 | lasso | 4 | 0.16 | 7.4e-12 | 7.84 | -7.4 | 1.7e-13 | -0.06 | 1.00 | 0.00 | FALSE |
60 | GTEx | Cells Transformed fibroblasts | AC007292.4 | 0.19 | 0.07 | enet | 29 | 0.07 | 3.6e-06 | -7.70 | 6.0 | 1.5e-09 | 0.16 | 0.72 | 0.02 | FALSE |
61 | GTEx | Colon Sigmoid | MAP2K2 | 0.20 | 0.11 | lasso | 3 | 0.13 | 3.0e-05 | 13.80 | 15.2 | 2.7e-52 | 0.71 | 0.02 | 0.86 | TRUE |
62 | GTEx | Colon Sigmoid | CHAF1A | 0.33 | 0.08 | lasso | 5 | 0.12 | 7.5e-05 | 8.70 | -7.1 | 1.1e-12 | -0.06 | 0.59 | 0.02 | FALSE |
63 | GTEx | Colon Sigmoid | UBXN6 | 0.34 | 0.15 | lasso | 6 | 0.14 | 1.7e-05 | 7.84 | -9.4 | 7.4e-21 | -0.09 | 0.70 | 0.02 | TRUE |
64 | GTEx | Colon Sigmoid | CTB-50L17.9 | 0.42 | 0.38 | lasso | 5 | 0.37 | 4.4e-14 | 7.84 | -8.0 | 1.5e-15 | -0.07 | 1.00 | 0.00 | FALSE |
65 | GTEx | Colon Transverse | AP3D1 | 0.31 | 0.14 | lasso | 4 | 0.16 | 7.2e-08 | -7.78 | 7.4 | 1.0e-13 | 0.05 | 0.91 | 0.00 | FALSE |
66 | GTEx | Colon Transverse | CTB-50L17.9 | 0.29 | 0.36 | lasso | 2 | 0.38 | 2.3e-19 | 7.84 | -6.8 | 1.1e-11 | -0.05 | 1.00 | 0.00 | FALSE |
67 | GTEx | Colon Transverse | AC007292.6 | 0.32 | 0.05 | lasso | 6 | 0.20 | 1.2e-09 | 7.72 | -5.5 | 3.8e-08 | -0.05 | 0.98 | 0.00 | FALSE |
68 | GTEx | Colon Transverse | AC007292.4 | 0.16 | 0.05 | lasso | 4 | 0.00 | 1.9e-01 | -6.71 | -11.3 | 1.0e-29 | -0.42 | 0.14 | 0.08 | FALSE |
69 | GTEx | Esophagus Gastroesophageal Junction | CHAF1A | 0.30 | 0.25 | enet | 16 | 0.29 | 5.1e-11 | 7.72 | -6.2 | 5.1e-10 | -0.06 | 0.99 | 0.00 | FALSE |
70 | GTEx | Esophagus Gastroesophageal Junction | CTB-50L17.9 | 0.22 | 0.18 | lasso | 2 | 0.19 | 1.7e-07 | 7.84 | -7.9 | 2.0e-15 | -0.06 | 0.92 | 0.00 | FALSE |
71 | GTEx | Esophagus Mucosa | AP3D1 | 0.18 | 0.21 | lasso | 3 | 0.21 | 2.4e-14 | -7.21 | 7.3 | 2.1e-13 | 0.04 | 1.00 | 0.00 | FALSE |
72 | GTEx | Esophagus Mucosa | CTB-50L17.5 | 0.20 | 0.04 | enet | 26 | 0.07 | 2.5e-05 | 12.10 | 8.5 | 2.3e-17 | 0.40 | 0.50 | 0.09 | FALSE |
73 | GTEx | Esophagus Mucosa | AC005786.7 | 0.11 | 0.01 | lasso | 3 | 0.04 | 1.7e-03 | 8.06 | -6.1 | 1.4e-09 | -0.23 | 0.06 | 0.13 | FALSE |
74 | GTEx | Esophagus Mucosa | CTB-50L17.9 | 0.20 | 0.23 | lasso | 4 | 0.22 | 8.2e-15 | 7.84 | -7.9 | 2.9e-15 | -0.06 | 1.00 | 0.00 | FALSE |
75 | GTEx | Esophagus Muscularis | AP3D1 | 0.32 | 0.24 | lasso | 3 | 0.24 | 5.7e-15 | -6.52 | 7.3 | 2.5e-13 | 0.06 | 1.00 | 0.00 | FALSE |
76 | GTEx | Esophagus Muscularis | DOT1L | 0.12 | 0.03 | lasso | 5 | 0.05 | 6.3e-04 | 13.50 | 10.4 | 3.2e-25 | -0.07 | 0.01 | 0.97 | FALSE |
77 | GTEx | Esophagus Muscularis | CHAF1A | 0.45 | 0.37 | enet | 17 | 0.49 | 4.2e-33 | 8.70 | -7.3 | 2.2e-13 | -0.07 | 1.00 | 0.00 | FALSE |
78 | GTEx | Esophagus Muscularis | UBXN6 | 0.35 | 0.24 | enet | 20 | 0.29 | 3.7e-18 | 7.84 | -9.1 | 1.1e-19 | -0.09 | 1.00 | 0.00 | FALSE |
79 | GTEx | Esophagus Muscularis | CTB-50L17.5 | 0.28 | 0.17 | lasso | 3 | 0.19 | 6.7e-12 | 8.97 | -7.5 | 5.3e-14 | -0.06 | 1.00 | 0.00 | FALSE |
80 | GTEx | Esophagus Muscularis | CTB-50L17.9 | 0.37 | 0.36 | lasso | 5 | 0.35 | 3.8e-22 | 7.84 | -7.9 | 2.6e-15 | -0.06 | 1.00 | 0.00 | FALSE |
81 | GTEx | Esophagus Muscularis | AC007292.6 | 0.13 | 0.08 | lasso | 2 | 0.05 | 4.9e-04 | 7.93 | -8.1 | 3.8e-16 | -0.07 | 0.60 | 0.02 | FALSE |
82 | GTEx | Heart Atrial Appendage | CHAF1A | 0.28 | 0.19 | enet | 12 | 0.19 | 4.9e-09 | 8.70 | -7.3 | 3.9e-13 | -0.08 | 1.00 | 0.00 | FALSE |
83 | GTEx | Heart Atrial Appendage | UBXN6 | 0.34 | 0.12 | lasso | 6 | 0.21 | 6.5e-10 | 9.01 | -10.2 | 1.6e-24 | -0.09 | 1.00 | 0.00 | FALSE |
84 | GTEx | Heart Atrial Appendage | CTB-50L17.9 | 0.32 | 0.34 | lasso | 3 | 0.34 | 3.8e-16 | 7.84 | -8.3 | 1.1e-16 | -0.07 | 1.00 | 0.00 | FALSE |
85 | GTEx | Heart Left Ventricle | CHAF1A | 0.17 | 0.12 | lasso | 2 | 0.11 | 1.9e-06 | 9.01 | -9.0 | 1.7e-19 | -0.08 | 0.80 | 0.05 | FALSE |
86 | GTEx | Heart Left Ventricle | UBXN6 | 0.21 | 0.14 | lasso | 6 | 0.16 | 5.6e-09 | -9.02 | -10.2 | 2.4e-24 | -0.08 | 1.00 | 0.00 | FALSE |
87 | GTEx | Heart Left Ventricle | CTB-50L17.9 | 0.25 | 0.17 | lasso | 2 | 0.18 | 5.4e-10 | 7.84 | -7.5 | 4.8e-14 | -0.06 | 0.99 | 0.00 | FALSE |
88 | GTEx | Lung | AP3D1 | 0.14 | 0.11 | lasso | 3 | 0.12 | 1.6e-09 | -6.52 | 6.9 | 3.8e-12 | 0.05 | 1.00 | 0.00 | FALSE |
89 | GTEx | Lung | CTB-50L17.5 | 0.24 | 0.05 | enet | 43 | 0.10 | 2.2e-08 | 9.01 | -7.0 | 1.8e-12 | -0.05 | 0.99 | 0.00 | FALSE |
90 | GTEx | Lung | CTB-50L17.9 | 0.23 | 0.32 | lasso | 2 | 0.32 | 2.4e-25 | 8.01 | -8.0 | 1.6e-15 | -0.06 | 1.00 | 0.00 | FALSE |
91 | GTEx | Lung | AC007292.6 | 0.16 | 0.07 | lasso | 4 | 0.06 | 1.1e-05 | 7.84 | -5.2 | 1.6e-07 | -0.04 | 0.85 | 0.01 | FALSE |
92 | GTEx | Muscle Skeletal | MPND | 0.10 | 0.07 | lasso | 3 | 0.05 | 6.3e-06 | 7.93 | 8.1 | 5.7e-16 | 0.07 | 0.99 | 0.00 | FALSE |
93 | GTEx | Muscle Skeletal | AP3D1 | 0.11 | 0.07 | lasso | 5 | 0.07 | 2.9e-07 | -6.52 | 5.6 | 2.6e-08 | 0.06 | 0.96 | 0.00 | FALSE |
94 | GTEx | Muscle Skeletal | CHAF1A | 0.18 | 0.21 | lasso | 2 | 0.20 | 9.7e-20 | 9.01 | -9.0 | 2.4e-19 | -0.08 | 1.00 | 0.00 | FALSE |
95 | GTEx | Muscle Skeletal | UBXN6 | 0.19 | 0.14 | lasso | 5 | 0.18 | 4.1e-17 | -9.02 | -10.1 | 7.4e-24 | -0.08 | 1.00 | 0.00 | FALSE |
96 | GTEx | Muscle Skeletal | CTB-50L17.5 | 0.11 | 0.09 | lasso | 4 | 0.09 | 7.9e-09 | 8.70 | -6.8 | 9.2e-12 | -0.06 | 1.00 | 0.00 | FALSE |
97 | GTEx | Muscle Skeletal | CTB-50L17.9 | 0.23 | 0.23 | lasso | 5 | 0.21 | 2.0e-20 | 7.84 | -7.9 | 2.0e-15 | -0.07 | 1.00 | 0.00 | FALSE |
98 | GTEx | Muscle Skeletal | AC007292.3 | 0.08 | 0.03 | lasso | 3 | 0.04 | 1.4e-04 | 7.93 | 7.8 | 6.6e-15 | 0.07 | 0.88 | 0.02 | FALSE |
99 | GTEx | Nerve Tibial | POLR2E | 0.25 | 0.06 | lasso | 4 | 0.13 | 1.6e-09 | -4.42 | -5.7 | 9.5e-09 | 0.03 | 0.70 | 0.02 | FALSE |
100 | GTEx | Nerve Tibial | IZUMO4 | 0.23 | 0.07 | lasso | 6 | 0.14 | 1.9e-10 | -7.78 | -12.6 | 3.7e-36 | 0.00 | 0.03 | 0.97 | FALSE |
101 | GTEx | Nerve Tibial | CHAF1A | 0.35 | 0.31 | lasso | 8 | 0.36 | 1.3e-26 | 8.70 | -6.9 | 5.1e-12 | -0.07 | 1.00 | 0.00 | TRUE |
102 | GTEx | Nerve Tibial | UBXN6 | 0.17 | 0.08 | enet | 20 | 0.09 | 4.4e-07 | 8.01 | -8.2 | 1.9e-16 | -0.06 | 0.96 | 0.00 | FALSE |
103 | GTEx | Nerve Tibial | CTB-50L17.5 | 0.11 | 0.08 | enet | 4 | 0.08 | 1.6e-06 | 8.70 | -8.8 | 1.8e-18 | -0.07 | 0.98 | 0.00 | FALSE |
104 | GTEx | Nerve Tibial | CTB-50L17.9 | 0.35 | 0.41 | lasso | 1 | 0.40 | 2.1e-30 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 1.00 | 0.00 | FALSE |
105 | GTEx | Ovary | CTB-50L17.9 | 0.29 | 0.24 | lasso | 2 | 0.21 | 6.5e-06 | 8.01 | -8.0 | 1.1e-15 | -0.05 | 0.45 | 0.03 | FALSE |
106 | GTEx | Pancreas | CHAF1A | 0.23 | 0.10 | enet | 14 | 0.10 | 6.6e-05 | 8.97 | -7.1 | 9.4e-13 | -0.06 | 0.55 | 0.02 | FALSE |
107 | GTEx | Pancreas | UBXN6 | 0.18 | -0.01 | enet | 24 | 0.03 | 1.7e-02 | -8.93 | -6.2 | 7.3e-10 | 0.09 | 0.05 | 0.08 | TRUE |
108 | GTEx | Pancreas | CTB-50L17.9 | 0.24 | 0.15 | lasso | 4 | 0.07 | 1.0e-03 | 7.84 | -6.9 | 4.7e-12 | -0.02 | 0.69 | 0.02 | FALSE |
109 | GTEx | Pituitary | CTB-50L17.9 | 0.51 | 0.27 | lasso | 5 | 0.33 | 5.6e-09 | 7.84 | -8.0 | 1.0e-15 | -0.07 | 0.76 | 0.01 | FALSE |
110 | GTEx | Prostate | UBXN6 | 0.27 | 0.15 | enet | 19 | 0.14 | 2.4e-04 | 7.84 | -5.3 | 9.7e-08 | 0.04 | 0.12 | 0.11 | FALSE |
111 | GTEx | Prostate | PLIN4 | 0.42 | 0.18 | lasso | 7 | 0.01 | 2.1e-01 | -7.00 | -7.4 | 9.8e-14 | -0.07 | 0.10 | 0.06 | FALSE |
112 | GTEx | Prostate | MIR637 | 0.30 | -0.01 | lasso | 6 | -0.01 | 5.5e-01 | -9.02 | -8.7 | 5.1e-18 | -0.08 | 0.05 | 0.05 | FALSE |
113 | GTEx | Skin Not Sun Exposed Suprapubic | CHAF1A | 0.27 | 0.22 | lasso | 5 | 0.24 | 2.8e-13 | 7.84 | -7.3 | 2.9e-13 | -0.06 | 1.00 | 0.00 | FALSE |
114 | GTEx | Skin Not Sun Exposed Suprapubic | CTB-50L17.5 | 0.17 | 0.13 | enet | 21 | 0.15 | 2.0e-08 | 8.97 | -5.6 | 1.9e-08 | -0.03 | 0.88 | 0.02 | FALSE |
115 | GTEx | Skin Not Sun Exposed Suprapubic | CTB-50L17.9 | 0.43 | 0.52 | lasso | 2 | 0.51 | 3.3e-32 | 7.84 | -7.9 | 3.3e-15 | -0.06 | 1.00 | 0.00 | FALSE |
116 | GTEx | Skin Not Sun Exposed Suprapubic | AC007292.6 | 0.11 | 0.08 | lasso | 6 | 0.07 | 7.8e-05 | 8.97 | -8.5 | 1.4e-17 | -0.07 | 0.43 | 0.02 | FALSE |
117 | GTEx | Skin Sun Exposed Lower leg | CHAF1A | 0.19 | 0.18 | lasso | 1 | 0.17 | 5.1e-14 | 8.70 | -8.7 | 3.2e-18 | -0.08 | 1.00 | 0.00 | FALSE |
118 | GTEx | Skin Sun Exposed Lower leg | UBXN6 | 0.14 | 0.00 | enet | 31 | 0.00 | 7.1e-01 | -9.74 | -9.3 | 9.1e-21 | -0.05 | 0.12 | 0.05 | FALSE |
119 | GTEx | Skin Sun Exposed Lower leg | AC004490.1 | 0.09 | 0.07 | enet | 11 | 0.10 | 2.3e-08 | -8.15 | 9.4 | 3.4e-21 | 0.02 | 0.78 | 0.16 | FALSE |
120 | GTEx | Skin Sun Exposed Lower leg | CTB-50L17.9 | 0.39 | 0.48 | lasso | 3 | 0.47 | 7.7e-44 | 7.84 | -7.8 | 7.6e-15 | -0.06 | 1.00 | 0.00 | FALSE |
121 | GTEx | Skin Sun Exposed Lower leg | AC007292.6 | 0.14 | 0.04 | lasso | 4 | 0.03 | 1.2e-03 | 7.72 | -5.5 | 4.0e-08 | -0.05 | 0.45 | 0.03 | FALSE |
122 | GTEx | Small Intestine Terminal Ileum | CTB-50L17.9 | 0.46 | 0.34 | lasso | 4 | 0.36 | 7.2e-09 | 7.84 | -7.7 | 1.0e-14 | -0.07 | 0.64 | 0.02 | FALSE |
123 | GTEx | Stomach | CTB-50L17.9 | 0.28 | 0.31 | lasso | 1 | 0.31 | 3.6e-15 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 1.00 | 0.00 | FALSE |
124 | GTEx | Stomach | AC007292.4 | 0.27 | 0.09 | lasso | 5 | 0.04 | 4.0e-03 | -9.75 | 10.8 | 2.8e-27 | 0.11 | 0.16 | 0.04 | FALSE |
125 | GTEx | Testis | CHAF1A | 0.18 | 0.09 | lasso | 2 | 0.07 | 4.0e-04 | 9.01 | -9.3 | 8.9e-21 | -0.07 | 0.15 | 0.05 | FALSE |
126 | GTEx | Testis | UBXN6 | 0.20 | 0.10 | lasso | 3 | 0.10 | 2.9e-05 | 7.84 | -8.4 | 5.7e-17 | -0.07 | 0.82 | 0.01 | FALSE |
127 | GTEx | Testis | CTB-50L17.9 | 0.39 | 0.30 | enet | 36 | 0.34 | 9.4e-16 | 7.84 | -7.3 | 2.2e-13 | -0.02 | 1.00 | 0.00 | FALSE |
128 | GTEx | Thyroid | CHAF1A | 0.29 | 0.24 | lasso | 6 | 0.26 | 3.0e-20 | 8.70 | -6.6 | 4.4e-11 | -0.06 | 1.00 | 0.00 | FALSE |
129 | GTEx | Thyroid | UBXN6 | 0.25 | 0.19 | lasso | 5 | 0.23 | 8.8e-18 | 8.97 | -8.8 | 1.4e-18 | -0.07 | 1.00 | 0.00 | FALSE |
130 | GTEx | Thyroid | HDGFRP2 | 0.08 | 0.05 | lasso | 2 | 0.03 | 1.0e-03 | 7.13 | -7.5 | 6.6e-14 | 0.05 | 0.35 | 0.03 | FALSE |
131 | GTEx | Thyroid | CTB-50L17.9 | 0.35 | 0.42 | lasso | 2 | 0.42 | 2.2e-34 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 1.00 | 0.00 | FALSE |
132 | GTEx | Thyroid | AC007292.6 | 0.44 | 0.12 | lasso | 6 | 0.11 | 1.2e-08 | 2.26 | 5.8 | 6.3e-09 | 0.27 | 0.99 | 0.00 | FALSE |
133 | GTEx | Vagina | CTB-50L17.9 | 0.38 | 0.26 | lasso | 5 | 0.23 | 5.7e-06 | 9.01 | -9.2 | 5.3e-20 | -0.09 | 0.38 | 0.04 | FALSE |
134 | GTEx | Whole Blood | UBXN6 | 0.06 | 0.03 | lasso | 4 | 0.01 | 4.1e-02 | -9.71 | -8.2 | 2.8e-16 | -0.06 | 0.41 | 0.18 | FALSE |
135 | GTEx | Whole Blood | CTB-50L17.9 | 0.21 | 0.17 | lasso | 3 | 0.18 | 9.6e-17 | 7.84 | -8.4 | 6.0e-17 | -0.08 | 1.00 | 0.00 | FALSE |
136 | NTR | Blood | C19orf35 | 0.03 | 0.01 | enet | 9 | 0.02 | 3.7e-07 | -2.86 | -7.4 | 1.2e-13 | -0.03 | 0.96 | 0.03 | FALSE |
137 | NTR | Blood | PIAS4 | 0.01 | 0.00 | blup | 193 | 0.00 | 1.3e-02 | -0.17 | 9.3 | 1.6e-20 | 0.34 | 0.04 | 0.26 | FALSE |
138 | NTR | Blood | TMPRSS9 | 0.04 | 0.02 | lasso | 4 | 0.04 | 1.3e-11 | -1.09 | -6.0 | 2.3e-09 | -0.02 | 0.99 | 0.01 | FALSE |
139 | ROSMAP | Brain Pre-frontal Cortex | AP3D1 | 0.39 | 0.40 | enet | 12 | 0.43 | 8.8e-60 | -6.52 | 7.4 | 1.6e-13 | 0.04 | 1.00 | 0.00 | FALSE |
140 | ROSMAP | Brain Pre-frontal Cortex | PIAS4 | 0.14 | 0.12 | lasso | 6 | 0.11 | 1.6e-13 | 15.10 | 14.4 | 8.9e-47 | 0.66 | 1.00 | 0.00 | TRUE |
141 | ROSMAP | Brain Pre-frontal Cortex | CHAF1A | 0.22 | 0.23 | lasso | 2 | 0.28 | 1.1e-36 | 8.70 | -6.0 | 2.1e-09 | -0.05 | 1.00 | 0.00 | FALSE |
142 | ROSMAP | Brain Pre-frontal Cortex | HDGFRP2 | 0.03 | 0.02 | lasso | 3 | 0.02 | 1.2e-03 | 5.24 | -5.4 | 7.9e-08 | -0.07 | 0.35 | 0.02 | FALSE |
143 | YFS | Blood | DUS3L | 0.30 | 0.38 | lasso | 5 | 0.38 | 3.4e-133 | 5.21 | -5.2 | 2.5e-07 | 0.03 | 0.02 | 0.98 | FALSE |
144 | YFS | Blood | MAP2K2 | 0.02 | 0.00 | blup | 373 | 0.01 | 5.9e-03 | -3.62 | -9.2 | 4.2e-20 | -0.51 | 0.09 | 0.42 | FALSE |
145 | YFS | Blood | PIAS4 | 0.06 | 0.02 | bslmm | 369 | 0.04 | 4.8e-14 | 15.10 | 14.1 | 2.5e-45 | 0.67 | 0.01 | 0.99 | FALSE |
146 | YFS | Blood | UBXN6 | 0.03 | 0.02 | enet | 39 | 0.02 | 1.2e-08 | -9.40 | -5.7 | 1.5e-08 | 0.02 | 0.97 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | AP3D1 | 0.05 | 0.00 | blup | 49 | 0.02 | 1.7e-02 | -6.52 | 9.9 | 2.7e-23 | 0.06 | 0.03 | 0.07 | FALSE |
148 | The Cancer Genome Atlas | Breast Invasive Carcinoma | AP3D1 | 0.01 | 0.01 | blup | 52 | 0.01 | 5.4e-03 | -6.52 | 11.4 | 6.6e-30 | 0.02 | 0.05 | 0.12 | TRUE |
149 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MPND | 0.08 | 0.03 | enet | 15 | 0.03 | 1.7e-06 | 7.93 | 6.2 | 7.7e-10 | 0.04 | 0.75 | 0.18 | FALSE |
150 | The Cancer Genome Atlas | Breast Invasive Carcinoma | UBXN6 | 0.03 | 0.03 | lasso | 3 | 0.03 | 2.3e-06 | -8.93 | -9.0 | 1.6e-19 | -0.06 | 0.90 | 0.04 | FALSE |
151 | The Cancer Genome Atlas | Glioblastoma Multiforme | SEMA6B | 0.24 | -0.01 | blup | 42 | 0.05 | 1.1e-02 | 5.12 | 6.6 | 5.5e-11 | -0.03 | 0.00 | 0.39 | FALSE |
152 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | UBXN6 | 0.05 | 0.01 | blup | 57 | 0.04 | 6.6e-05 | 9.01 | -12.9 | 2.8e-38 | -0.10 | 0.15 | 0.57 | TRUE |
153 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | AP3D1 | 0.04 | 0.04 | lasso | 2 | 0.04 | 6.1e-05 | -6.52 | 6.5 | 6.9e-11 | 0.06 | 0.39 | 0.03 | FALSE |
154 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CHAF1A | 0.12 | 0.11 | lasso | 3 | 0.12 | 7.9e-13 | 8.70 | -8.9 | 5.6e-19 | -0.07 | 0.96 | 0.04 | FALSE |
155 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DOT1L | 0.08 | 0.12 | enet | 8 | 0.10 | 2.5e-11 | 13.50 | 14.4 | 7.0e-47 | -0.02 | 0.01 | 0.99 | TRUE |
156 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DUS3L | 0.09 | 0.03 | blup | 38 | 0.10 | 4.3e-11 | 5.14 | -5.2 | 1.6e-07 | 0.04 | 0.00 | 0.99 | TRUE |
157 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MPND | 0.05 | 0.03 | lasso | 3 | 0.02 | 5.3e-03 | 7.79 | 8.0 | 1.9e-15 | 0.06 | 0.09 | 0.15 | FALSE |
158 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | UBXN6 | 0.18 | 0.17 | enet | 18 | 0.18 | 9.9e-20 | 9.01 | -7.8 | 4.7e-15 | -0.05 | 1.00 | 0.00 | FALSE |
159 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CHAF1A | 0.15 | 0.12 | lasso | 2 | 0.12 | 3.2e-07 | 8.70 | -8.7 | 4.9e-18 | -0.07 | 0.97 | 0.03 | FALSE |
160 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | JSRP1 | 0.07 | 0.04 | blup | 33 | 0.03 | 7.8e-03 | -2.76 | 6.1 | 1.2e-09 | -0.03 | 0.01 | 0.21 | FALSE |
161 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | MPND | 0.17 | 0.02 | blup | 50 | 0.05 | 5.6e-04 | 7.79 | 6.7 | 2.1e-11 | 0.09 | 0.13 | 0.35 | TRUE |
162 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | UBXN6 | 0.15 | 0.10 | lasso | 1 | 0.10 | 2.8e-06 | 7.84 | -7.8 | 4.4e-15 | -0.06 | 0.66 | 0.01 | FALSE |
163 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CHAF1A | 0.17 | 0.14 | lasso | 4 | 0.16 | 1.1e-17 | 8.70 | -7.3 | 3.4e-13 | -0.06 | 0.95 | 0.05 | FALSE |
164 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DUS3L | 0.06 | 0.07 | lasso | 4 | 0.06 | 1.1e-07 | 5.21 | -5.2 | 1.8e-07 | 0.03 | 0.00 | 0.99 | FALSE |
165 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | DOT1L | 0.09 | 0.08 | blup | 60 | 0.07 | 4.1e-04 | -11.90 | 12.9 | 5.0e-38 | -0.02 | 0.02 | 0.95 | TRUE |
166 | The Cancer Genome Atlas | Lung Adenocarcinoma | AP3D1 | 0.03 | 0.04 | lasso | 1 | 0.03 | 1.4e-04 | -7.18 | 7.2 | 6.7e-13 | 0.03 | 0.26 | 0.04 | TRUE |
167 | The Cancer Genome Atlas | Lung Adenocarcinoma | CHAF1A | 0.05 | 0.04 | lasso | 4 | 0.03 | 2.3e-04 | 9.01 | -8.2 | 2.0e-16 | -0.07 | 0.42 | 0.06 | FALSE |
168 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | JSRP1 | 0.03 | 0.00 | blup | 33 | 0.02 | 2.1e-03 | -1.24 | -5.7 | 1.3e-08 | -0.05 | 0.01 | 0.15 | TRUE |
169 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MPND | 0.04 | 0.00 | blup | 50 | 0.01 | 9.3e-03 | 7.93 | 6.8 | 1.4e-11 | 0.07 | 0.01 | 0.29 | FALSE |
170 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | UBXN6 | 0.04 | 0.03 | lasso | 2 | 0.02 | 1.6e-03 | 7.84 | -8.6 | 6.1e-18 | -0.07 | 0.07 | 0.05 | FALSE |
171 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CHAF1A | 0.20 | 0.11 | lasso | 2 | 0.11 | 5.6e-05 | 8.97 | -9.3 | 1.9e-20 | -0.08 | 0.28 | 0.16 | FALSE |
172 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | UBXN6 | 0.23 | 0.11 | lasso | 5 | 0.12 | 2.5e-05 | 7.84 | -9.3 | 9.6e-21 | -0.06 | 0.05 | 0.19 | FALSE |
173 | The Cancer Genome Atlas | Prostate Adenocarcinoma | AP3D1 | 0.06 | 0.05 | enet | 7 | 0.04 | 5.7e-05 | -6.52 | 8.9 | 5.8e-19 | 0.06 | 0.85 | 0.04 | FALSE |
174 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CHAF1A | 0.13 | 0.09 | lasso | 6 | 0.10 | 3.5e-10 | 9.01 | -7.5 | 8.8e-14 | -0.07 | 0.86 | 0.14 | FALSE |
175 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MUM1 | 0.06 | 0.00 | blup | 50 | 0.01 | 1.6e-02 | -4.59 | -5.4 | 5.4e-08 | 0.02 | 0.01 | 0.43 | FALSE |
176 | The Cancer Genome Atlas | Prostate Adenocarcinoma | UBXN6 | 0.13 | 0.10 | lasso | 2 | 0.10 | 1.3e-10 | 9.01 | -9.6 | 1.1e-21 | -0.09 | 1.00 | 0.00 | FALSE |
177 | The Cancer Genome Atlas | Stomach Adenocarcinoma | AP3D1 | 0.09 | 0.07 | lasso | 5 | 0.08 | 3.2e-06 | -6.52 | 7.2 | 5.2e-13 | 0.06 | 0.95 | 0.02 | TRUE |
178 | The Cancer Genome Atlas | Stomach Adenocarcinoma | RPL36 | 0.04 | 0.00 | blup | 37 | 0.03 | 3.3e-03 | 2.91 | -5.2 | 2.3e-07 | 0.07 | 0.02 | 0.26 | TRUE |
179 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | DOT1L | 0.40 | -0.01 | enet | 20 | 0.03 | 3.6e-02 | -1.72 | 8.0 | 1.9e-15 | -0.04 | 0.01 | 0.20 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | AP3D1 | 0.05 | 0.05 | lasso | 3 | 0.04 | 1.0e-04 | -6.52 | 6.5 | 6.7e-11 | 0.06 | 0.54 | 0.01 | FALSE |
181 | The Cancer Genome Atlas | Thyroid Carcinoma | CHAF1A | 0.22 | 0.19 | lasso | 3 | 0.20 | 5.4e-19 | 8.70 | -7.6 | 3.7e-14 | -0.07 | 0.93 | 0.07 | FALSE |
182 | The Cancer Genome Atlas | Thyroid Carcinoma | UBXN6 | 0.16 | 0.12 | lasso | 2 | 0.12 | 5.4e-12 | 9.01 | -9.5 | 2.6e-21 | -0.08 | 1.00 | 0.00 | FALSE |