[Hub]/) : Traits : Blood Red Count : ← →

chr22:27,675,538-31,118,395

Best TWAS P=2.16e-10 · Best GWAS P=1.38e-12 conditioned to 0.00892

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CCDC117 0.03 0.01 blup 323 0.02 2.3e-03 -5.01 5.9 3.1e-09 -0.76 0.11 0.49 FALSE
2 CommonMind Brain Pre-frontal Cortex MTMR3 0.07 0.03 blup 473 0.06 5.3e-08 -3.65 -5.9 3.6e-09 -0.02 0.15 0.84 TRUE
3 GTEx Adipose Visceral Omentum CHEK2 0.14 0.03 enet 13 0.03 9.1e-03 2.75 -5.2 1.5e-07 0.53 0.09 0.27 FALSE
4 GTEx Cells Transformed fibroblasts CCDC117 0.10 0.01 lasso 6 0.02 2.4e-02 -5.33 6.3 2.2e-10 -0.74 0.01 0.94 TRUE
5 GTEx Nerve Tibial TTC28 0.13 0.03 lasso 3 0.06 2.5e-05 4.28 -5.3 1.3e-07 0.42 0.29 0.53 FALSE
6 GTEx Skin Sun Exposed Lower leg CCDC117 0.07 0.03 enet 11 0.03 2.8e-03 -5.31 5.6 2.2e-08 -0.70 0.02 0.91 FALSE
7 NTR Blood ASCC2 0.04 0.00 blup 390 0.01 4.5e-05 -0.84 5.7 1.1e-08 -0.03 0.12 0.02 TRUE
8 YFS Blood CCDC117 0.03 0.02 lasso 3 0.02 3.1e-08 -4.62 5.9 3.8e-09 -0.16 0.86 0.01 TRUE
9 The Cancer Genome Atlas Esophageal Carcinoma OSM 0.51 0.10 enet 22 0.27 4.4e-09 5.90 5.5 4.4e-08 0.09 0.01 0.86 TRUE
10 The Cancer Genome Atlas Lung Adenocarcinoma CCDC117 0.03 0.01 blup 41 0.01 2.3e-02 -3.61 6.2 5.3e-10 -0.80 0.01 0.82 FALSE
11 The Cancer Genome Atlas Pancreatic Adenocarcinoma RNF215 0.16 0.08 lasso 3 0.10 8.6e-05 4.81 -5.5 2.9e-08 0.01 0.00 0.89 FALSE
12 The Cancer Genome Atlas Pancreatic Adenocarcinoma XBP1 0.06 0.03 blup 35 0.06 1.6e-03 -5.86 5.2 2.5e-07 -0.82 0.01 0.82 FALSE