[Hub]/) : Traits : Impedance of arm (right) : ← →

chr19:16,462,417-20,451,172

Best TWAS P=6.39e-20 · Best GWAS P=1.32e-16 conditioned to 0.806

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
86	The Cancer Genome Atlas	Lung Adenocarcinoma	YJEFN3	0.03	0.03	blup	32	0.02	3.0e-03	7.9	-9.1	6.4e-20	-0.89	0.01	0.92	TRUE
60	YFS	Blood	KIAA1683	0.51	0.40	enet	65	0.46	9.9e-171	7.8	8.1	5.1e-16	-0.01	0.00	1.00	TRUE
10	GTEx	Artery Tibial	CTD-3032J10.3	0.14	0.01	lasso	5	0.01	6.4e-02	7.0	-7.4	1.8e-13	0.01	0.01	0.86	TRUE
74	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	HAUS8	0.08	0.07	blup	55	0.07	6.7e-08	6.2	-6.7	1.9e-11	-0.07	0.79	0.21	TRUE
92	The Cancer Genome Atlas	Prostate Adenocarcinoma	OCEL1	0.16	0.05	blup	53	0.10	1.6e-10	4.6	6.2	6.1e-10	0.03	0.00	0.98	TRUE
51	NTR	Blood	PGPEP1	0.02	0.01	lasso	3	0.01	8.5e-05	-3.9	-5.6	2.4e-08	0.02	0.31	0.04	TRUE
71	The Cancer Genome Atlas	Colon Adenocarcinoma	TSSK6	0.07	0.02	blup	32	0.04	2.9e-03	7.9	9.1	1.0e-19	0.84	0.01	0.83	FALSE
103	The Cancer Genome Atlas	Thyroid Carcinoma	YJEFN3	0.08	0.06	blup	33	0.08	7.1e-08	8.1	-9.0	1.9e-19	-0.89	0.01	0.99	FALSE
93	The Cancer Genome Atlas	Prostate Adenocarcinoma	YJEFN3	0.04	0.05	lasso	2	0.05	4.3e-06	8.1	-8.2	3.5e-16	-0.95	0.01	0.99	FALSE
22	GTEx	Colon Transverse	YJEFN3	0.09	0.09	lasso	3	0.07	4.3e-04	7.9	-8.1	5.1e-16	-0.89	0.03	0.93	FALSE
82	The Cancer Genome Atlas	Brain Lower Grade Glioma	JUND	0.04	0.03	lasso	2	0.02	7.9e-04	7.9	8.0	1.7e-15	-0.01	0.00	0.99	FALSE
57	ROSMAP	Brain Pre-frontal Cortex	HAPLN4	0.05	0.03	enet	15	0.03	1.7e-04	4.8	7.9	2.3e-15	0.84	0.02	0.98	FALSE
88	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	KIAA1683	0.09	0.05	lasso	4	0.06	1.3e-07	7.9	7.9	3.0e-15	0.00	0.00	1.00	FALSE
45	GTEx	Vagina	LRRC25	0.63	0.02	enet	2	0.04	5.3e-02	7.9	-7.9	3.9e-15	0.01	0.02	0.68	FALSE
78	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	JUND	0.05	0.04	lasso	1	0.04	4.3e-05	7.9	7.9	4.0e-15	-0.01	0.00	0.99	FALSE
1	CommonMind	Brain Pre-frontal Cortex	HAPLN4	0.07	0.10	lasso	6	0.10	5.3e-12	8.3	7.7	9.6e-15	0.99	0.02	0.98	FALSE
38	GTEx	Pituitary	KIAA1683	0.43	0.25	lasso	3	0.17	3.9e-05	7.7	7.7	1.3e-14	0.03	0.01	0.96	FALSE
81	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	KIAA1683	0.13	0.02	blup	65	0.05	1.0e-03	7.7	7.7	1.4e-14	0.01	0.00	0.98	FALSE
63	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	YJEFN3	0.04	0.05	lasso	7	0.04	1.6e-04	8.2	-7.7	1.8e-14	-0.92	0.01	0.98	FALSE
36	GTEx	Nerve Tibial	KIAA1683	0.25	0.22	lasso	9	0.28	5.2e-20	7.9	7.6	2.1e-14	0.01	0.00	1.00	FALSE
101	The Cancer Genome Atlas	Thyroid Carcinoma	KIAA1683	0.15	0.09	lasso	6	0.16	5.4e-15	7.7	7.6	2.1e-14	0.02	0.01	0.99	FALSE
64	The Cancer Genome Atlas	Breast Invasive Carcinoma	CILP2	0.02	0.02	blup	30	0.02	1.6e-04	8.2	7.6	3.4e-14	0.93	0.01	0.96	FALSE
53	ROSMAP	Brain Pre-frontal Cortex	KIAA1683	0.23	0.14	bslmm	409	0.24	1.4e-30	-5.7	7.5	5.0e-14	0.01	0.01	0.99	FALSE
62	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	KIAA1683	0.05	0.04	enet	6	0.05	4.9e-05	-5.7	7.5	6.7e-14	0.02	0.01	0.97	FALSE
44	GTEx	Thyroid	YJEFN3	0.05	0.02	lasso	3	0.02	1.2e-02	8.1	-7.5	7.3e-14	-0.85	0.03	0.87	FALSE
54	ROSMAP	Brain Pre-frontal Cortex	JUND	0.17	0.17	lasso	5	0.20	2.7e-25	7.9	7.5	7.6e-14	0.01	0.00	1.00	FALSE
96	The Cancer Genome Atlas	Stomach Adenocarcinoma	HAPLN4	0.08	0.03	blup	37	0.04	7.2e-04	8.2	7.4	1.4e-13	0.88	0.01	0.98	FALSE
27	GTEx	Esophagus Muscularis	KIAA1683	0.10	0.04	lasso	3	0.06	1.1e-04	-5.7	7.4	1.5e-13	0.00	0.01	0.99	FALSE
65	The Cancer Genome Atlas	Breast Invasive Carcinoma	HAPLN4	0.04	0.07	lasso	4	0.06	1.3e-12	8.3	7.4	2.0e-13	0.97	0.01	0.99	FALSE
3	GTEx	Adipose Subcutaneous	KIAA1683	0.14	0.09	enet	6	0.16	2.5e-13	-5.7	7.3	2.1e-13	-0.01	0.02	0.98	FALSE
47	GTEx	Whole Blood	LPAR2	0.10	0.07	lasso	5	0.07	8.0e-07	6.7	-7.3	2.7e-13	-0.80	0.18	0.82	FALSE
21	GTEx	Colon Transverse	KIAA1683	0.15	0.02	lasso	3	0.02	3.3e-02	-5.1	7.2	5.0e-13	0.02	0.01	0.98	FALSE
98	The Cancer Genome Atlas	Testicular Germ Cell Tumors	KIAA1683	0.17	0.06	blup	65	0.06	3.0e-03	-4.5	7.1	9.0e-13	0.02	0.01	0.90	FALSE
83	The Cancer Genome Atlas	Brain Lower Grade Glioma	KIAA1683	0.16	0.11	lasso	6	0.11	2.9e-12	-5.7	7.1	1.0e-12	0.00	0.82	0.18	FALSE
75	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	KIAA1683	0.05	0.03	lasso	4	0.04	9.1e-06	-6.0	7.0	2.0e-12	0.03	0.04	0.96	FALSE
67	The Cancer Genome Atlas	Breast Invasive Carcinoma	KIAA1683	0.04	0.02	blup	65	0.03	2.6e-07	-5.6	6.9	6.6e-12	0.02	0.08	0.92	FALSE
33	GTEx	Muscle Skeletal	SUGP1	0.11	0.06	lasso	7	0.07	9.5e-08	8.3	-6.8	8.7e-12	-0.95	0.02	0.98	FALSE
79	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	KIAA1683	0.09	0.07	lasso	8	0.12	2.1e-13	-5.6	6.8	9.5e-12	0.00	0.11	0.89	FALSE
26	GTEx	Esophagus Muscularis	MYO9B	0.13	0.02	lasso	5	0.05	9.5e-04	4.8	-6.8	1.0e-11	-0.03	0.03	0.96	FALSE
6	GTEx	Adrenal Gland	KIAA1683	0.26	0.05	enet	21	0.19	1.7e-07	-3.9	6.7	1.7e-11	0.02	0.05	0.92	FALSE
100	The Cancer Genome Atlas	Thyroid Carcinoma	HAUS8	0.04	0.06	lasso	2	0.05	2.2e-05	6.3	-6.7	2.8e-11	-0.03	0.04	0.95	FALSE
97	The Cancer Genome Atlas	Stomach Adenocarcinoma	HAUS8	0.06	0.04	blup	55	0.04	1.0e-03	6.2	-6.7	2.9e-11	-0.05	0.04	0.41	FALSE
89	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	HAUS8	0.20	0.13	lasso	2	0.11	2.4e-05	6.3	-6.6	3.7e-11	-0.05	0.38	0.28	FALSE
2	CommonMind	Brain Pre-frontal Cortex	KIAA1683	0.09	0.06	enet	14	0.10	6.6e-12	-6.0	6.6	4.2e-11	0.00	0.02	0.98	FALSE
50	NTR	Blood	LPAR2	0.04	0.03	lasso	3	0.03	3.6e-11	6.7	-6.6	4.3e-11	-0.64	0.97	0.03	FALSE
20	GTEx	Colon Sigmoid	KIAA1683	0.15	0.09	lasso	6	0.09	5.1e-04	-5.1	6.6	5.2e-11	0.02	0.03	0.90	FALSE
29	GTEx	Heart Atrial Appendage	KIAA1683	0.15	0.03	lasso	5	0.10	2.4e-05	7.8	6.5	6.0e-11	0.04	0.01	0.97	FALSE
9	GTEx	Artery Tibial	HAUS8	0.16	0.02	lasso	7	0.02	4.7e-03	6.2	-6.5	6.2e-11	-0.04	0.22	0.70	FALSE
95	The Cancer Genome Atlas	Soft Tissue Sarcoma	KIAA1683	0.07	0.00	blup	64	0.01	4.5e-02	-4.8	6.5	7.3e-11	0.07	0.01	0.72	FALSE
94	The Cancer Genome Atlas	Soft Tissue Sarcoma	HAPLN4	0.11	0.01	blup	38	0.02	2.7e-02	8.2	6.5	7.5e-11	0.91	0.01	0.87	FALSE
16	GTEx	Cells Transformed fibroblasts	KIAA1683	0.14	0.16	lasso	2	0.15	1.2e-11	-5.7	6.5	8.6e-11	0.00	0.89	0.11	FALSE
31	GTEx	Lung	LPAR2	0.07	0.09	lasso	3	0.05	9.9e-05	6.7	-6.4	1.5e-10	-0.71	0.60	0.34	FALSE
25	GTEx	Esophagus Mucosa	AC068499.10	0.16	0.07	lasso	5	0.08	6.7e-06	-6.0	-6.4	1.6e-10	0.02	0.68	0.06	FALSE
85	The Cancer Genome Atlas	Lung Adenocarcinoma	KIAA1683	0.04	0.04	lasso	4	0.05	2.5e-06	-6.0	6.4	1.7e-10	0.02	0.69	0.24	FALSE
73	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	HAPLN4	0.07	0.05	lasso	7	0.07	2.9e-08	8.2	6.4	1.8e-10	0.93	0.01	0.99	FALSE
34	GTEx	Muscle Skeletal	HAUS8	0.15	0.10	lasso	4	0.08	1.6e-08	6.3	-6.4	2.1e-10	-0.04	0.78	0.22	FALSE
68	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	HAUS8	0.10	0.07	blup	55	0.07	3.2e-04	6.3	-6.4	2.1e-10	-0.05	0.10	0.81	FALSE
40	GTEx	Skin Not Sun Exposed Suprapubic	KIAA1683	0.16	0.05	enet	12	0.06	3.5e-04	-5.7	6.3	2.7e-10	0.02	0.07	0.91	FALSE
41	GTEx	Spleen	LPAR2	0.27	0.06	lasso	6	0.04	2.7e-02	3.6	-6.3	3.3e-10	-0.72	0.04	0.67	FALSE
70	The Cancer Genome Atlas	Colon Adenocarcinoma	HAUS8	0.12	0.06	lasso	5	0.06	1.8e-04	6.2	-6.3	3.9e-10	0.01	0.12	0.79	FALSE
55	ROSMAP	Brain Pre-frontal Cortex	HAUS8	0.05	0.05	enet	7	0.05	7.1e-07	6.2	-6.2	4.3e-10	-0.04	0.38	0.62	FALSE
91	The Cancer Genome Atlas	Prostate Adenocarcinoma	KIAA1683	0.06	0.02	blup	65	0.04	3.2e-05	-5.1	6.2	6.2e-10	0.00	0.07	0.90	FALSE
4	GTEx	Adipose Subcutaneous	HAUS8	0.11	0.09	lasso	3	0.08	5.4e-07	6.2	-6.2	6.8e-10	-0.04	0.28	0.72	FALSE
12	GTEx	Brain Cerebellar Hemisphere	HAUS8	0.44	0.15	lasso	7	0.11	8.1e-04	6.2	-6.2	7.2e-10	-0.03	0.21	0.26	FALSE
66	The Cancer Genome Atlas	Breast Invasive Carcinoma	HAUS8	0.05	0.06	enet	12	0.06	2.9e-12	6.3	-6.2	7.3e-10	-0.02	0.78	0.22	FALSE
7	GTEx	Artery Aorta	HAUS8	0.18	0.12	lasso	2	0.09	7.3e-06	6.2	-6.1	7.9e-10	-0.04	0.20	0.78	FALSE
77	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	HAUS8	0.09	0.14	lasso	4	0.12	5.9e-14	6.2	-6.1	1.4e-09	-0.04	0.80	0.20	FALSE
23	GTEx	Esophagus Mucosa	LPAR2	0.08	0.03	lasso	2	0.01	1.1e-01	6.1	-6.0	1.5e-09	-0.67	0.10	0.69	FALSE
61	YFS	Blood	LPAR2	0.14	0.15	lasso	5	0.16	3.6e-48	6.6	-6.0	1.5e-09	-0.65	1.00	0.00	FALSE
15	GTEx	Cells Transformed fibroblasts	LPAR2	0.04	0.05	lasso	2	0.04	5.5e-04	6.7	-6.0	1.9e-09	-0.69	0.12	0.57	FALSE
49	METSIM	Adipose	KIAA1683	0.21	0.24	enet	21	0.27	2.1e-40	-3.9	6.0	2.2e-09	0.04	1.00	0.00	FALSE
8	GTEx	Artery Tibial	KIAA1683	0.16	0.08	enet	11	0.15	8.2e-12	-5.7	6.0	2.7e-09	0.01	0.54	0.46	FALSE
84	The Cancer Genome Atlas	Lung Adenocarcinoma	HAUS8	0.04	0.04	lasso	2	0.03	1.6e-04	6.2	-5.9	3.8e-09	-0.05	0.49	0.17	FALSE
87	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	HAUS8	0.06	0.04	enet	4	0.05	3.9e-06	4.8	-5.9	3.9e-09	-0.04	0.79	0.15	FALSE
37	GTEx	Pituitary	OCEL1	0.53	0.07	lasso	10	0.24	1.2e-06	-3.6	5.9	4.4e-09	-0.01	0.15	0.05	FALSE
14	GTEx	Breast Mammary Tissue	KIAA1683	0.17	0.10	lasso	5	0.07	1.2e-04	-5.1	5.8	5.2e-09	0.03	0.09	0.90	FALSE
42	GTEx	Spleen	KIAA1683	0.26	0.17	lasso	6	0.13	3.9e-04	-5.7	5.8	7.2e-09	0.00	0.23	0.32	FALSE
11	GTEx	Brain Cerebellar Hemisphere	ATP13A1	0.19	0.15	lasso	2	0.07	7.3e-03	5.8	5.7	9.7e-09	0.64	0.07	0.44	FALSE
35	GTEx	Nerve Tibial	LPAR2	0.14	0.05	lasso	5	0.06	2.3e-05	6.7	-5.7	1.1e-08	-0.67	0.68	0.08	FALSE
99	The Cancer Genome Atlas	Thyroid Carcinoma	HAPLN4	0.08	0.06	blup	37	0.09	1.8e-09	3.0	5.7	1.1e-08	0.88	0.02	0.98	FALSE
30	GTEx	Heart Left Ventricle	KIAA1683	0.20	0.03	lasso	7	0.15	2.9e-08	-5.1	5.7	1.2e-08	0.03	0.01	0.98	FALSE
48	GTEx	Whole Blood	OCEL1	0.13	0.02	lasso	4	0.08	1.2e-07	4.8	5.7	1.2e-08	0.01	0.97	0.00	FALSE
39	GTEx	Prostate	KIAA1683	0.20	0.27	lasso	1	0.23	1.8e-06	-5.7	5.7	1.6e-08	0.00	0.27	0.16	FALSE
69	The Cancer Genome Atlas	Colon Adenocarcinoma	HAPLN4	0.10	0.08	blup	38	0.11	8.5e-07	2.3	5.6	1.6e-08	0.89	0.03	0.96	FALSE
19	GTEx	Colon Sigmoid	RFXANK	0.19	-0.01	enet	38	0.02	9.2e-02	-4.7	5.6	1.7e-08	0.56	0.03	0.38	FALSE
90	The Cancer Genome Atlas	Prostate Adenocarcinoma	HAUS8	0.13	0.10	blup	55	0.11	7.8e-12	6.2	-5.6	1.7e-08	-0.04	0.80	0.20	FALSE
52	ROSMAP	Brain Pre-frontal Cortex	MYO9B	0.11	0.01	lasso	8	0.07	5.4e-09	6.7	-5.6	2.7e-08	0.02	0.02	0.98	FALSE
76	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	GMIP	0.03	0.02	lasso	4	0.02	3.2e-03	6.7	5.6	2.7e-08	0.67	0.00	0.94	FALSE
56	ROSMAP	Brain Pre-frontal Cortex	TSSK6	0.04	0.00	blup	346	0.01	1.1e-02	7.8	5.5	4.3e-08	0.76	0.03	0.92	FALSE
102	The Cancer Genome Atlas	Thyroid Carcinoma	TM6SF2	0.05	0.04	blup	34	0.05	2.8e-05	-5.1	-5.5	4.9e-08	-0.17	0.63	0.02	FALSE
28	GTEx	Esophagus Muscularis	HAUS8	0.20	0.11	lasso	4	0.09	5.1e-06	6.2	-5.4	5.1e-08	-0.05	0.56	0.30	FALSE
24	GTEx	Esophagus Mucosa	OCEL1	0.20	0.08	enet	16	0.10	1.8e-07	4.1	5.4	5.4e-08	0.00	0.95	0.00	FALSE
5	GTEx	Adipose Visceral Omentum	HAUS8	0.15	0.12	lasso	2	0.12	7.0e-07	6.2	-5.4	7.9e-08	-0.05	0.16	0.83	FALSE
59	YFS	Blood	HAUS8	0.03	0.02	lasso	6	0.02	3.3e-07	5.8	-5.4	7.9e-08	-0.06	0.86	0.14	FALSE
58	YFS	Blood	GMIP	0.10	0.06	enet	37	0.08	9.6e-24	-3.2	5.4	8.4e-08	0.48	1.00	0.00	FALSE
72	The Cancer Genome Atlas	Glioblastoma Multiforme	JUND	0.17	0.00	blup	57	0.03	5.4e-02	7.9	5.4	8.4e-08	0.05	0.01	0.66	FALSE
17	GTEx	Cells Transformed fibroblasts	HAUS8	0.12	0.05	enet	19	0.05	1.0e-04	6.2	-5.3	8.9e-08	-0.01	0.31	0.59	FALSE
46	GTEx	Vagina	CTD-2521M24.6	0.48	0.01	lasso	6	0.02	9.0e-02	2.0	-5.3	9.8e-08	-0.05	0.04	0.16	FALSE
32	GTEx	Lung	OCEL1	0.28	0.10	lasso	6	0.21	1.1e-15	-3.3	5.3	1.0e-07	0.02	0.99	0.00	FALSE
43	GTEx	Stomach	PLVAP	0.27	0.01	lasso	5	0.00	5.0e-01	6.8	5.3	1.2e-07	0.03	0.03	0.50	FALSE
13	GTEx	Brain Hippocampus	DDX49	0.23	-0.01	lasso	4	-0.01	6.6e-01	-5.5	5.2	1.6e-07	0.21	0.05	0.06	FALSE
80	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	TM6SF2	0.04	0.03	blup	35	0.03	2.5e-04	-5.1	-5.2	2.2e-07	-0.20	0.39	0.02	FALSE
18	GTEx	Cells Transformed fibroblasts	MEF2B	0.08	0.08	enet	15	0.09	1.7e-07	-4.7	5.2	2.3e-07	0.13	0.86	0.01	FALSE