[Hub]/) : Traits : Standing height :

chr3:11,829,474-14,912,402

Best TWAS P=1.38e-16 · Best GWAS P=1.67e-23 conditioned to 6.46e-17

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex TMEM43 0.10 0.01 blup 568 0.03 8.4e-05 -5.0 8.3 1.4e-16 -0.01 0.58 0.01 TRUE
2 CommonMind Brain Pre-frontal Cortex WNT7A 0.07 0.01 bslmm 539 0.03 1.3e-04 -6.4 -5.9 4.2e-09 -0.17 0.34 0.02 TRUE
3 GTEx Adipose Subcutaneous RAF1 0.08 0.02 lasso 6 0.04 5.2e-04 -5.7 5.4 6.5e-08 -0.02 0.76 0.03 FALSE
4 GTEx Adipose Visceral Omentum MKRN2 0.20 0.05 enet 11 0.09 1.7e-05 -7.2 -6.0 2.5e-09 -0.12 0.03 0.96 FALSE
5 GTEx Artery Tibial MKRN2 0.27 0.09 enet 20 0.25 3.1e-19 -1.2 -5.3 1.3e-07 -0.15 0.05 0.95 FALSE
6 GTEx Artery Tibial TSEN2 0.14 0.10 lasso 6 0.07 5.3e-06 -6.4 6.3 3.5e-10 0.08 0.16 0.84 FALSE
7 GTEx Cells EBV-transformed lymphocytes MKRN2 0.32 0.26 lasso 4 0.21 1.5e-07 -6.6 6.6 4.9e-11 0.05 0.74 0.21 FALSE
8 GTEx Esophagus Gastroesophageal Junction MKRN2 0.17 0.10 enet 13 0.07 1.9e-03 -8.0 -7.6 2.7e-14 -0.09 0.01 0.97 FALSE
9 GTEx Esophagus Muscularis MKRN2 0.15 0.05 lasso 8 0.12 8.9e-08 6.4 -5.6 2.0e-08 -0.13 0.25 0.74 FALSE
10 GTEx Heart Atrial Appendage MKRN2 0.14 0.09 lasso 3 0.08 1.5e-04 -7.3 -7.9 3.3e-15 -0.06 0.01 0.99 TRUE
11 GTEx Heart Left Ventricle MKRN2 0.21 0.05 enet 15 0.14 1.1e-07 -7.2 -6.5 6.4e-11 -0.12 0.02 0.98 FALSE
12 GTEx Muscle Skeletal CAND2 0.34 0.29 lasso 5 0.31 1.0e-30 5.0 -5.2 1.9e-07 -0.01 1.00 0.00 FALSE
13 GTEx Nerve Tibial CAND2 0.12 0.01 enet 8 0.03 4.9e-03 4.9 5.3 9.5e-08 -0.01 0.30 0.06 FALSE
14 GTEx Thyroid MKRN2 0.11 0.04 enet 14 0.05 6.3e-05 -7.5 -5.8 7.3e-09 -0.12 0.02 0.97 FALSE
15 ROSMAP Brain Pre-frontal Cortex TSEN2 0.15 0.11 lasso 8 0.13 1.1e-16 -6.8 6.3 2.5e-10 0.08 0.94 0.06 FALSE
16 ROSMAP Brain Pre-frontal Cortex WNT7A 0.12 0.04 enet 8 0.05 6.6e-07 -6.4 -6.0 2.7e-09 -0.14 0.99 0.00 FALSE
17 ROSMAP Brain Pre-frontal Cortex XPC 0.10 0.04 lasso 4 0.05 2.8e-07 4.8 -6.1 1.1e-09 -0.13 1.00 0.00 FALSE
18 YFS Blood RAF1 0.02 0.03 lasso 2 0.03 2.1e-10 -7.6 -7.7 1.1e-14 -0.07 0.01 0.99 FALSE
19 YFS Blood TMEM43 0.05 0.01 lasso 6 0.02 7.6e-07 -2.3 5.2 1.9e-07 0.00 0.69 0.30 FALSE
20 The Cancer Genome Atlas Esophageal Carcinoma XPC 0.20 0.07 lasso 5 0.06 4.6e-03 -6.8 5.7 1.6e-08 0.06 0.00 0.95 TRUE
21 The Cancer Genome Atlas Testicular Germ Cell Tumors RAF1 0.31 0.16 lasso 4 0.16 3.8e-06 6.7 6.4 1.4e-10 0.09 0.26 0.54 FALSE