[Hub]/) : Traits : Standing height :

chr1:31,402,148-34,592,020

Best TWAS P=3.24e-23 · Best GWAS P=8.11e-27 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex TMEM54 0.05 0.00 blup 281 0.02 4.5e-03 0.24 -5.2 1.5e-07 -0.07 0.11 0.27 FALSE
2 CommonMind Brain Pre-frontal Cortex TXLNA 0.04 0.04 bslmm 221 0.03 1.8e-04 6.98 -5.5 4.5e-08 -0.20 0.84 0.01 FALSE
3 CommonMind Brain Pre-frontal Cortex ZNF362 0.05 0.06 lasso 1 0.06 2.2e-07 -7.17 -7.2 7.6e-13 -0.09 0.01 0.99 TRUE
4 GTEx Artery Aorta PEF1 0.15 0.05 lasso 5 0.04 2.2e-03 -6.40 7.4 1.3e-13 0.10 0.51 0.02 TRUE
5 GTEx Brain Caudate basal ganglia FAM167B 0.43 0.00 lasso 11 0.00 3.0e-01 -0.73 5.2 1.7e-07 0.34 0.02 0.21 TRUE
6 GTEx Cells EBV-transformed lymphocytes KPNA6 0.19 0.14 enet 18 0.10 4.9e-04 6.93 6.7 1.8e-11 0.36 0.22 0.05 TRUE
7 GTEx Cells EBV-transformed lymphocytes PHC2 0.58 0.34 lasso 7 0.28 7.3e-10 -6.90 6.5 6.1e-11 0.10 0.02 0.98 FALSE
8 GTEx Cells Transformed fibroblasts KPNA6 0.13 0.10 lasso 5 0.11 1.3e-08 6.97 7.0 3.6e-12 0.38 1.00 0.00 FALSE
9 GTEx Colon Sigmoid PEF1 0.16 0.09 lasso 3 0.09 4.3e-04 -4.40 5.5 3.0e-08 0.06 0.21 0.05 FALSE
10 GTEx Nerve Tibial TXLNA 0.10 0.00 enet 5 0.00 6.8e-01 -2.34 -5.8 7.6e-09 -0.32 0.04 0.04 TRUE
11 GTEx Skin Not Sun Exposed Suprapubic EIF3I 0.12 0.06 lasso 1 0.03 7.2e-03 6.89 -6.9 5.6e-12 -0.38 0.09 0.04 FALSE
12 GTEx Skin Sun Exposed Lower leg PEF1 0.05 0.03 enet 9 0.02 4.6e-03 -6.40 5.2 2.0e-07 0.10 0.66 0.01 FALSE
13 GTEx Testis RP4-622L5.7 0.12 0.11 lasso 5 0.08 2.3e-04 6.98 7.0 2.9e-12 0.38 0.35 0.13 FALSE
14 METSIM Adipose KPNA6 0.07 0.06 lasso 10 0.06 1.8e-09 6.97 7.2 5.3e-13 0.40 1.00 0.00 FALSE
15 ROSMAP Brain Pre-frontal Cortex KPNA6 0.03 0.04 lasso 4 0.02 8.1e-04 6.91 7.2 6.9e-13 0.42 0.60 0.22 TRUE
16 ROSMAP Brain Pre-frontal Cortex PHC2 0.11 0.07 lasso 3 0.05 2.2e-07 -6.90 -6.5 5.8e-11 -0.09 0.01 0.99 FALSE
17 YFS Blood KPNA6 0.03 0.03 bslmm 236 0.04 1.1e-11 7.19 7.6 3.1e-14 0.40 1.00 0.00 FALSE
18 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma TMEM39B 0.04 0.03 blup 16 0.03 5.0e-04 6.97 -6.2 5.8e-10 -0.31 0.01 0.94 FALSE
19 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma MTMR9L 0.03 0.03 blup 28 0.01 1.6e-02 4.34 6.4 1.8e-10 0.39 0.04 0.54 FALSE
20 The Cancer Genome Atlas Brain Lower Grade Glioma KPNA6 0.02 0.02 blup 29 0.02 1.9e-03 6.88 6.8 1.1e-11 0.36 0.02 0.84 FALSE
21 The Cancer Genome Atlas Brain Lower Grade Glioma MTMR9L 0.04 0.04 blup 29 0.02 1.0e-03 4.20 6.2 5.3e-10 0.40 0.19 0.45 TRUE
22 The Cancer Genome Atlas Lung Adenocarcinoma MTMR9L 0.03 0.00 blup 30 0.01 1.0e-02 4.09 6.3 2.5e-10 0.32 0.01 0.60 TRUE
23 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TMEM39B 0.05 0.04 enet 9 0.05 1.7e-04 6.96 -5.3 8.7e-08 -0.22 0.01 0.82 TRUE
24 The Cancer Genome Atlas Skin Cutaneous Melanoma MTMR9L 0.15 0.02 blup 29 0.09 2.8e-03 2.83 6.1 8.8e-10 0.35 0.01 0.39 FALSE
25 The Cancer Genome Atlas Testicular Germ Cell Tumors PTP4A2 0.09 -0.01 blup 26 0.00 4.1e-01 7.50 9.9 3.2e-23 0.80 0.01 0.56 TRUE
26 The Cancer Genome Atlas Thyroid Carcinoma FAM167B 0.03 0.01 blup 26 0.02 2.4e-03 4.34 -5.6 2.0e-08 -0.37 0.02 0.74 FALSE
27 The Cancer Genome Atlas Thyroid Carcinoma KPNA6 0.03 0.03 blup 28 0.03 5.3e-04 7.19 6.8 1.1e-11 0.34 0.02 0.90 TRUE
28 The Cancer Genome Atlas Thyroid Carcinoma MTMR9L 0.03 0.04 blup 28 0.03 3.3e-04 4.09 6.2 7.4e-10 0.38 0.03 0.91 TRUE