[Hub]/) : Traits : Hayfever, allergic rhinitis or eczema :

chr20:61,522,825-62,912,463

Best TWAS P=7.19e-10 · Best GWAS P=8.2e-10 conditioned to 0.101

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Brain Cerebellar Hemisphere STMN3 0.39 0.08 lasso 5 0.22 2.1e-06 -5.9 -5.2 2.6e-07 0.73 0.02 0.96 FALSE
2 GTEx Brain Cerebellum STMN3 0.33 0.12 lasso 10 0.20 1.8e-06 -4.9 -6.1 9.2e-10 0.81 0.04 0.95 FALSE
3 GTEx Brain Cortex STMN3 0.25 0.09 lasso 7 0.11 6.8e-04 -5.1 -6.2 7.2e-10 0.86 0.04 0.87 TRUE
4 GTEx Breast Mammary Tissue (Female) GMEB2 0.36 0.06 lasso 4 0.05 1.2e-02 -6.1 -5.8 4.9e-09 0.92 0.01 0.92 FALSE
5 GTEx Testis RTEL1 0.19 0.06 lasso 5 0.14 8.0e-07 -5.1 -5.3 1.2e-07 0.76 0.02 0.96 FALSE
6 GTEx Thyroid SLC2A4RG 0.12 0.06 lasso 5 0.04 2.4e-04 -4.9 5.2 2.2e-07 -0.80 0.06 0.93 FALSE
7 GTEx Whole Blood STMN3 0.10 0.00 lasso 3 0.00 1.2e-01 -5.3 6.0 1.9e-09 -0.75 0.04 0.59 FALSE
8 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma STMN3 0.02 0.02 blup 43 0.02 1.7e-03 -5.3 -5.4 5.4e-08 0.91 0.01 0.90 FALSE
9 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma TNFRSF6B 0.03 0.01 blup 44 0.02 7.1e-04 -4.9 -5.4 5.5e-08 0.86 0.03 0.89 FALSE
10 The Cancer Genome Atlas Brain Lower Grade Glioma LIME1 0.02 0.03 blup 47 0.02 6.2e-03 -5.1 -5.3 1.0e-07 0.82 0.03 0.68 FALSE
11 The Cancer Genome Atlas Brain Lower Grade Glioma ZGPAT 0.05 0.04 blup 60 0.05 7.2e-07 -5.0 5.5 3.9e-08 -0.78 0.04 0.96 FALSE
12 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RTEL1 0.05 0.04 blup 56 0.03 4.2e-03 -4.0 -5.6 2.1e-08 0.75 0.03 0.42 FALSE
13 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma STMN3 0.07 0.01 blup 41 0.05 4.2e-04 -5.9 -5.4 8.3e-08 0.86 0.01 0.95 FALSE
14 The Cancer Genome Atlas Prostate Adenocarcinoma ZGPAT 0.05 0.06 lasso 3 0.06 5.5e-07 -5.3 5.3 1.0e-07 -0.85 0.45 0.55 FALSE
15 The Cancer Genome Atlas Thyroid Carcinoma LIME1 0.05 0.03 blup 47 0.04 3.9e-05 -5.0 -5.7 1.0e-08 0.75 0.03 0.96 FALSE