[Hub]/) : Traits : Height : ← →

chr4:6,213,622-11,156,010

Best TWAS P=4.68e-34 · Best GWAS P=1.59e-52 conditioned to 7.53e-14

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	SLC2A9	0.06	0.01	blup	565	0.02	6.2e-04	-5.0	-6.9	3.8e-12	0.04	0.48	0.08	TRUE
2	GTEx	Adipose Subcutaneous	TRMT44	0.20	0.19	lasso	8	0.19	9.4e-16	-7.3	-5.4	7.2e-08	-0.04	1.00	0.00	FALSE
3	GTEx	Adipose Visceral Omentum	SLC2A9	0.15	0.02	lasso	4	0.04	3.6e-03	-5.7	-6.5	6.3e-11	0.04	0.29	0.12	FALSE
4	GTEx	Adipose Visceral Omentum	TRMT44	0.11	0.11	lasso	2	0.08	9.2e-05	-5.5	-5.4	8.5e-08	0.02	0.86	0.01	FALSE
5	GTEx	Adrenal Gland	ACOX3	0.15	0.12	lasso	6	0.13	2.5e-05	-6.9	-6.9	6.9e-12	0.07	0.70	0.02	FALSE
6	GTEx	Artery Aorta	TRMT44	0.11	0.11	lasso	4	0.10	6.4e-06	-5.5	-5.7	1.3e-08	0.03	0.86	0.02	FALSE
7	GTEx	Artery Tibial	TRMT44	0.10	0.06	lasso	6	0.06	1.6e-05	-5.5	-6.1	9.8e-10	0.06	0.94	0.00	FALSE
8	GTEx	Brain Caudate basal ganglia	TRMT44	0.51	0.30	lasso	9	0.26	3.4e-08	-5.4	-5.5	4.3e-08	0.02	0.93	0.01	FALSE
9	GTEx	Brain Cerebellar Hemisphere	TRMT44	0.41	0.26	lasso	5	0.20	5.8e-06	-7.3	-7.2	4.2e-13	0.08	0.79	0.01	FALSE
10	GTEx	Brain Cerebellar Hemisphere	AFAP1	0.60	0.28	lasso	11	0.34	1.1e-09	9.3	8.5	2.5e-17	-0.01	0.02	0.98	FALSE
11	GTEx	Brain Cerebellar Hemisphere	RP11-689P11.2	0.45	0.14	lasso	5	0.19	1.4e-05	-7.3	-6.0	2.3e-09	0.05	0.52	0.04	FALSE
12	GTEx	Brain Cerebellar Hemisphere	AFAP1-AS1	0.33	0.16	lasso	7	0.16	5.9e-05	9.3	9.0	1.9e-19	0.00	0.02	0.93	TRUE
13	GTEx	Brain Cerebellum	GRPEL1	0.37	0.17	lasso	8	0.13	9.7e-05	-6.0	-5.8	5.7e-09	0.07	0.22	0.30	FALSE
14	GTEx	Brain Cerebellum	TRMT44	0.48	0.16	lasso	10	0.18	4.4e-06	-5.4	-5.2	2.6e-07	0.03	0.58	0.06	FALSE
15	GTEx	Brain Cerebellum	AFAP1	0.47	0.19	lasso	4	0.19	2.8e-06	-6.1	8.6	7.9e-18	0.00	0.03	0.95	FALSE
16	GTEx	Brain Cerebellum	RP11-689P11.2	0.28	0.11	lasso	2	0.17	1.0e-05	-7.3	-5.2	2.0e-07	0.07	0.18	0.18	FALSE
17	GTEx	Brain Cerebellum	AFAP1-AS1	0.47	0.05	lasso	10	0.10	7.6e-04	3.5	7.8	4.2e-15	0.01	0.04	0.72	FALSE
18	GTEx	Brain Cortex	TRMT44	0.29	0.22	enet	20	0.24	3.2e-07	-7.3	-6.2	5.3e-10	0.00	0.62	0.04	FALSE
19	GTEx	Brain Frontal Cortex BA9	RP11-689P11.2	0.28	0.03	lasso	4	0.12	4.1e-04	-5.7	-5.7	1.3e-08	0.07	0.20	0.05	FALSE
20	GTEx	Brain Hypothalamus	SLC2A9	0.42	-0.01	enet	39	0.03	6.9e-02	-5.7	-6.1	1.0e-09	0.07	0.07	0.11	FALSE
21	GTEx	Brain Hypothalamus	TRMT44	0.38	0.19	lasso	5	0.13	6.1e-04	-7.5	-6.7	2.7e-11	0.05	0.46	0.03	FALSE
22	GTEx	Brain Nucleus accumbens basal ganglia	TRMT44	0.25	0.19	lasso	5	0.17	2.1e-05	-7.3	-6.9	4.4e-12	0.08	0.40	0.03	FALSE
23	GTEx	Breast Mammary Tissue	TRMT44	0.19	0.22	lasso	5	0.20	2.2e-10	-7.2	-6.9	6.3e-12	0.07	1.00	0.00	FALSE
24	GTEx	Breast Mammary Tissue (Male)	TRMT44	0.22	0.03	lasso	8	0.01	2.1e-01	-5.7	-6.5	9.2e-11	0.10	0.07	0.06	FALSE
25	GTEx	Breast Mammary Tissue (Female)	TRMT44	0.23	0.19	enet	12	0.19	2.5e-06	-7.2	-5.1	3.1e-07	0.02	0.67	0.02	FALSE
26	GTEx	Breast Mammary Tissue (Female)	RP11-689P11.3	0.12	0.07	lasso	2	0.08	2.5e-03	-7.3	-6.6	3.6e-11	0.07	0.14	0.06	FALSE
27	GTEx	Cells EBV-transformed lymphocytes	GRPEL1	0.25	0.12	enet	7	0.06	3.9e-03	-5.9	-5.7	1.4e-08	0.05	0.24	0.37	FALSE
28	GTEx	Cells EBV-transformed lymphocytes	SLC2A9	0.25	0.18	lasso	6	0.18	2.0e-06	-5.0	-5.2	2.1e-07	0.05	0.86	0.06	FALSE
29	GTEx	Cells EBV-transformed lymphocytes	RP11-689P11.2	0.17	0.13	lasso	4	0.12	1.1e-04	-6.9	-6.5	8.3e-11	0.04	0.68	0.02	FALSE
30	GTEx	Cells Transformed fibroblasts	WDR1	0.09	0.03	lasso	4	0.03	2.1e-03	-4.5	5.2	2.3e-07	-0.06	0.29	0.03	FALSE
31	GTEx	Cells Transformed fibroblasts	ACOX3	0.25	0.14	lasso	7	0.14	1.6e-10	-7.3	-7.6	3.5e-14	0.08	1.00	0.00	FALSE
32	GTEx	Cells Transformed fibroblasts	GRPEL1	0.27	0.13	lasso	9	0.18	2.3e-13	-4.8	-5.6	2.5e-08	0.05	0.64	0.36	FALSE
33	GTEx	Cells Transformed fibroblasts	AFAP1	0.26	0.10	enet	39	0.13	3.6e-10	-4.9	-6.6	5.3e-11	-0.02	0.01	0.99	FALSE
34	GTEx	Cells Transformed fibroblasts	AFAP1-AS1	0.20	0.09	enet	31	0.07	4.7e-06	-9.8	-6.7	2.1e-11	-0.05	0.00	1.00	FALSE
35	GTEx	Colon Transverse	TRMT44	0.17	0.05	lasso	5	0.02	4.4e-02	-7.2	-6.9	7.1e-12	0.09	0.24	0.04	FALSE
36	GTEx	Esophagus Gastroesophageal Junction	RP11-689P11.2	0.30	0.21	lasso	7	0.25	1.2e-09	-6.6	-6.5	8.9e-11	0.07	0.99	0.00	FALSE
37	GTEx	Esophagus Mucosa	AFAP1	0.48	0.40	enet	29	0.43	3.9e-31	7.6	8.0	1.0e-15	-0.02	0.62	0.38	FALSE
38	GTEx	Esophagus Mucosa	RP11-689P11.2	0.21	0.12	lasso	7	0.11	6.4e-08	-6.9	-6.3	2.4e-10	0.04	1.00	0.00	FALSE
39	GTEx	Esophagus Mucosa	AFAP1-AS1	0.36	0.28	lasso	8	0.29	5.9e-20	7.6	7.4	1.1e-13	-0.02	0.51	0.49	FALSE
40	GTEx	Esophagus Muscularis	TRMT44	0.12	0.07	lasso	5	0.06	2.2e-04	-7.3	-6.5	5.9e-11	0.07	0.68	0.03	FALSE
41	GTEx	Heart Atrial Appendage	ZNF518B	0.10	0.01	lasso	3	0.00	4.6e-01	-5.9	6.2	5.2e-10	0.01	0.02	0.86	TRUE
42	GTEx	Liver	SLC2A9	0.18	0.13	lasso	6	0.12	3.7e-04	-5.8	-6.1	8.1e-10	0.00	0.30	0.13	FALSE
43	GTEx	Lung	ACOX3	0.13	0.03	lasso	5	0.05	6.3e-05	-7.3	-5.7	1.4e-08	0.06	0.89	0.00	FALSE
44	GTEx	Lung	SLC2A9	0.06	0.00	lasso	5	0.00	5.7e-01	-5.4	-6.7	2.4e-11	0.04	0.35	0.06	FALSE
45	GTEx	Lung	TRMT44	0.13	0.10	lasso	6	0.08	1.3e-06	-4.6	-5.8	6.3e-09	0.05	0.99	0.00	FALSE
46	GTEx	Lung	RP11-689P11.2	0.22	0.18	lasso	5	0.21	6.4e-16	-4.5	-6.0	1.7e-09	0.04	1.00	0.00	FALSE
47	GTEx	Muscle Skeletal	GRPEL1	0.10	0.05	lasso	3	0.05	5.0e-06	-4.9	-5.2	2.3e-07	0.03	0.85	0.14	FALSE
48	GTEx	Nerve Tibial	GRPEL1	0.16	0.07	lasso	4	0.06	2.9e-05	-5.9	-5.1	2.7e-07	0.05	0.46	0.34	FALSE
49	GTEx	Nerve Tibial	TRMT44	0.27	0.26	lasso	5	0.27	5.4e-19	-7.3	-7.0	3.0e-12	0.08	1.00	0.00	FALSE
50	GTEx	Nerve Tibial	RP11-689P11.2	0.32	0.11	enet	19	0.28	1.1e-19	-4.5	-5.3	1.2e-07	0.04	1.00	0.00	FALSE
51	GTEx	Nerve Tibial	RP11-689P11.3	0.17	0.10	lasso	4	0.08	3.3e-06	-5.5	-5.5	4.7e-08	0.02	0.94	0.00	FALSE
52	GTEx	Ovary	TRMT44	0.33	0.32	lasso	3	0.29	6.2e-08	-6.6	-7.0	2.7e-12	0.05	0.83	0.01	FALSE
53	GTEx	Ovary	RP11-689P11.2	0.34	0.10	lasso	6	0.04	3.7e-02	-4.5	-5.5	3.5e-08	0.01	0.15	0.05	FALSE
54	GTEx	Pancreas	SLC2A9	0.20	0.00	enet	16	0.03	1.5e-02	-5.6	-5.9	3.4e-09	0.01	0.22	0.21	FALSE
55	GTEx	Pituitary	RP11-689P11.2	0.56	0.05	lasso	8	0.12	6.5e-04	-7.5	-6.0	2.4e-09	0.04	0.45	0.08	FALSE
56	GTEx	Skin Not Sun Exposed Suprapubic	AFAP1	0.47	0.46	lasso	4	0.45	2.8e-27	7.6	7.7	1.6e-14	-0.02	0.98	0.02	FALSE
57	GTEx	Skin Not Sun Exposed Suprapubic	AFAP1-AS1	0.33	0.30	lasso	6	0.29	4.0e-16	7.6	7.5	5.9e-14	-0.03	0.98	0.02	FALSE
58	GTEx	Skin Sun Exposed Lower leg	SLC2A9	0.18	0.03	enet	15	0.06	1.2e-05	-5.9	-6.7	2.2e-11	-0.01	0.28	0.54	FALSE
59	GTEx	Skin Sun Exposed Lower leg	TBC1D14	0.11	0.08	lasso	2	0.07	1.5e-06	-6.0	-5.2	1.9e-07	0.05	0.24	0.70	FALSE
60	GTEx	Skin Sun Exposed Lower leg	TRMT44	0.08	0.04	lasso	4	0.02	1.7e-02	-7.5	-6.6	4.7e-11	0.06	0.48	0.02	FALSE
61	GTEx	Skin Sun Exposed Lower leg	AFAP1	0.50	0.45	lasso	8	0.46	4.2e-42	7.6	7.5	9.2e-14	-0.02	1.00	0.00	FALSE
62	GTEx	Skin Sun Exposed Lower leg	AFAP1-AS1	0.34	0.26	lasso	5	0.24	8.3e-20	7.6	7.6	3.7e-14	-0.01	0.77	0.23	FALSE
63	GTEx	Whole Blood	AFAP1	0.45	0.48	enet	44	0.50	1.3e-52	7.6	7.2	4.1e-13	-0.01	0.98	0.02	FALSE
64	GTEx	Whole Blood	AFAP1-AS1	0.36	0.33	lasso	8	0.33	2.6e-31	7.6	7.8	4.4e-15	-0.01	0.48	0.52	FALSE
65	METSIM	Adipose	AFAP1	0.05	0.03	enet	13	0.03	1.3e-05	7.6	8.2	3.7e-16	-0.01	0.04	0.96	FALSE
66	METSIM	Adipose	RP11-689P11.2	0.14	0.16	enet	25	0.17	4.2e-25	-7.2	-6.4	1.9e-10	0.05	1.00	0.00	FALSE
67	METSIM	Adipose	SLC2A9	0.05	0.04	lasso	4	0.03	9.3e-06	-5.7	-5.9	4.4e-09	0.00	0.67	0.33	FALSE
68	NTR	Blood	AFAP1	0.13	0.12	lasso	6	0.13	3.1e-39	7.6	6.4	1.2e-10	0.00	1.00	0.00	FALSE
69	NTR	Blood	TBC1D14	0.05	0.03	lasso	7	0.02	7.5e-08	-4.8	5.4	7.6e-08	0.00	0.66	0.34	FALSE
70	YFS	Blood	TADA2B	0.09	0.11	lasso	4	0.10	5.6e-32	-4.9	-5.2	1.7e-07	0.03	0.99	0.01	FALSE
71	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	GPR78	0.07	0.00	blup	65	0.02	1.7e-02	9.9	-6.0	2.3e-09	0.44	0.00	0.57	FALSE
72	The Cancer Genome Atlas	Breast Invasive Carcinoma	FLJ36777	0.04	0.02	blup	71	0.03	2.4e-07	-5.8	5.7	1.4e-08	-0.04	0.01	0.99	FALSE
73	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	ZNF518B	0.08	0.04	lasso	2	0.01	1.2e-01	6.2	6.2	5.5e-10	0.02	0.02	0.28	FALSE
74	The Cancer Genome Atlas	Colon Adenocarcinoma	FLJ36777	0.06	0.00	blup	69	0.04	4.0e-03	-4.9	5.4	6.5e-08	-0.01	0.02	0.25	FALSE
75	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	CPZ	0.03	0.00	blup	80	0.01	1.9e-02	-5.9	12.2	4.7e-34	-0.55	0.03	0.23	TRUE
76	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	GRPEL1	0.09	0.10	blup	52	0.12	5.4e-13	-5.9	-5.6	2.7e-08	0.05	0.05	0.95	FALSE
77	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	TADA2B	0.02	0.01	blup	56	0.02	1.9e-03	-6.0	-6.7	1.7e-11	0.06	0.05	0.61	TRUE
78	The Cancer Genome Atlas	Brain Lower Grade Glioma	GRPEL1	0.06	0.09	enet	9	0.10	3.1e-11	-4.8	-5.3	1.3e-07	0.04	0.18	0.82	FALSE
79	The Cancer Genome Atlas	Brain Lower Grade Glioma	SLC2A9	0.11	0.11	blup	206	0.13	1.0e-14	-5.4	-6.1	9.5e-10	0.06	0.07	0.93	FALSE
80	The Cancer Genome Atlas	Lung Adenocarcinoma	SLC2A9	0.06	0.02	enet	9	0.03	4.4e-04	-4.8	-5.5	3.4e-08	0.05	0.16	0.78	FALSE
81	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	CPZ	0.09	0.01	blup	80	0.03	4.4e-04	-1.5	11.8	3.7e-32	-0.54	0.02	0.52	TRUE
82	The Cancer Genome Atlas	Prostate Adenocarcinoma	C4orf23	0.06	0.03	enet	11	0.03	3.1e-04	-7.5	-5.2	2.2e-07	0.04	0.00	0.99	FALSE
83	The Cancer Genome Atlas	Prostate Adenocarcinoma	CPZ	0.10	0.12	lasso	4	0.13	3.1e-13	9.4	9.4	3.7e-21	-0.49	1.00	0.00	FALSE
84	The Cancer Genome Atlas	Prostate Adenocarcinoma	GRPEL1	0.05	0.04	blup	52	0.05	9.0e-06	-4.4	-6.1	1.0e-09	0.06	0.08	0.91	FALSE
85	The Cancer Genome Atlas	Thyroid Carcinoma	C4orf23	0.15	0.11	blup	90	0.13	5.2e-13	-5.6	-5.5	4.8e-08	0.06	0.03	0.97	FALSE
86	The Cancer Genome Atlas	Thyroid Carcinoma	SLC2A9	0.10	0.05	blup	208	0.05	2.7e-05	-5.8	-6.2	4.5e-10	0.02	0.02	0.96	FALSE
87	The Cancer Genome Atlas	Thyroid Carcinoma	TBC1D14	0.06	0.04	lasso	2	0.05	7.6e-06	-5.3	5.9	3.9e-09	-0.03	0.04	0.94	FALSE
88	The Cancer Genome Atlas	Thyroid Carcinoma	WDR1	0.12	0.05	blup	111	0.06	2.4e-06	-4.1	5.6	1.8e-08	-0.03	0.15	0.85	FALSE