Best TWAS P=1.08e-83 · Best GWAS P=5.69e-95 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | AMH | 0.21 | 0.15 | enet | 7 | 0.19 | 4.0e-23 | -7.046 | 8.1 | 7.7e-16 | -0.15 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | SIRT6 | 0.08 | 0.07 | lasso | 1 | 0.07 | 9.8e-09 | -6.981 | -7.0 | 2.9e-12 | 0.09 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | UBXN6 | 0.27 | 0.25 | enet | 28 | 0.29 | 4.6e-36 | 4.825 | -6.0 | 2.0e-09 | -0.05 | 1.00 | 0.00 | FALSE |
4 | GTEx | Adipose Subcutaneous | SIRT6 | 0.17 | 0.06 | lasso | 7 | 0.04 | 1.9e-04 | -6.648 | -5.7 | 1.6e-08 | 0.08 | 0.39 | 0.02 | FALSE |
5 | GTEx | Adipose Subcutaneous | ANKRD24 | 0.13 | 0.08 | lasso | 4 | 0.08 | 5.4e-07 | -6.867 | -6.5 | 6.3e-11 | 0.08 | 0.88 | 0.01 | FALSE |
6 | GTEx | Adipose Subcutaneous | AMH | 0.18 | 0.05 | lasso | 8 | 0.06 | 1.9e-05 | -6.892 | 10.0 | 9.9e-24 | -0.22 | 0.93 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | NFIC | 0.14 | 0.00 | enet | 11 | 0.00 | 2.7e-01 | -0.501 | -8.3 | 7.5e-17 | 0.01 | 0.06 | 0.13 | FALSE |
8 | GTEx | Adipose Subcutaneous | CHAF1A | 0.26 | 0.21 | enet | 14 | 0.28 | 2.2e-23 | 5.496 | -5.4 | 7.3e-08 | -0.04 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Visceral Omentum | NFIC | 0.20 | 0.00 | lasso | 5 | 0.02 | 2.2e-02 | 11.991 | -13.1 | 2.2e-39 | 0.07 | 0.08 | 0.04 | TRUE |
10 | GTEx | Adipose Visceral Omentum | CHAF1A | 0.24 | 0.26 | lasso | 3 | 0.26 | 6.2e-14 | 5.496 | -5.7 | 1.3e-08 | -0.04 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adipose Visceral Omentum | CTB-50L17.9 | 0.30 | 0.23 | lasso | 4 | 0.22 | 2.1e-11 | 4.827 | -5.5 | 3.9e-08 | -0.03 | 1.00 | 0.00 | FALSE |
12 | GTEx | Adrenal Gland | CHAF1A | 0.22 | 0.18 | lasso | 3 | 0.17 | 1.1e-06 | 4.715 | -5.1 | 2.9e-07 | -0.04 | 0.77 | 0.01 | FALSE |
13 | GTEx | Adrenal Gland | CTB-50L17.5 | 0.20 | 0.07 | lasso | 3 | 0.14 | 9.0e-06 | 5.496 | -5.4 | 7.3e-08 | -0.04 | 0.23 | 0.04 | FALSE |
14 | GTEx | Artery Aorta | SIRT6 | 0.20 | 0.12 | lasso | 4 | 0.12 | 5.2e-07 | -6.648 | -6.5 | 5.6e-11 | 0.11 | 0.66 | 0.05 | FALSE |
15 | GTEx | Artery Aorta | AMH | 0.37 | 0.19 | lasso | 7 | 0.18 | 3.2e-10 | -6.892 | 7.5 | 7.3e-14 | -0.04 | 1.00 | 0.00 | FALSE |
16 | GTEx | Artery Aorta | CHAF1A | 0.29 | 0.33 | lasso | 3 | 0.34 | 2.4e-19 | 5.496 | -5.6 | 1.9e-08 | -0.04 | 1.00 | 0.00 | FALSE |
17 | GTEx | Artery Aorta | CTB-50L17.5 | 0.16 | 0.15 | lasso | 7 | 0.15 | 1.0e-08 | 5.634 | -5.5 | 4.5e-08 | -0.03 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Tibial | DOT1L | 0.09 | 0.06 | lasso | 5 | 0.05 | 7.3e-05 | 18.586 | 16.5 | 4.9e-61 | -0.89 | 0.03 | 0.96 | FALSE |
19 | GTEx | Artery Tibial | AMH | 0.32 | 0.07 | enet | 25 | 0.14 | 4.5e-11 | -7.439 | 6.9 | 6.9e-12 | -0.04 | 0.99 | 0.00 | TRUE |
20 | GTEx | Artery Tibial | NFIC | 0.14 | 0.13 | enet | 11 | 0.12 | 7.6e-10 | 11.991 | -11.9 | 9.3e-33 | 0.02 | 1.00 | 0.00 | FALSE |
21 | GTEx | Artery Tibial | CHAF1A | 0.39 | 0.37 | lasso | 7 | 0.39 | 1.2e-32 | 5.496 | -5.7 | 9.2e-09 | -0.04 | 1.00 | 0.00 | FALSE |
22 | GTEx | Artery Tibial | UBXN6 | 0.18 | 0.07 | lasso | 3 | 0.14 | 6.3e-11 | 5.843 | -5.2 | 1.5e-07 | -0.05 | 1.00 | 0.00 | FALSE |
23 | GTEx | Artery Tibial | CACTIN-AS1 | 0.16 | 0.09 | enet | 21 | 0.11 | 4.1e-09 | 3.053 | 6.5 | 1.0e-10 | 0.00 | 0.99 | 0.00 | FALSE |
24 | GTEx | Artery Tibial | CTB-50L17.5 | 0.23 | 0.13 | lasso | 4 | 0.11 | 4.1e-09 | 5.634 | -5.5 | 4.6e-08 | -0.04 | 1.00 | 0.00 | FALSE |
25 | GTEx | Artery Tibial | AC005306.3 | 0.25 | 0.12 | enet | 59 | 0.11 | 3.9e-09 | -0.493 | -5.6 | 2.5e-08 | 0.16 | 1.00 | 0.00 | TRUE |
26 | GTEx | Artery Tibial | AC005786.7 | 0.13 | 0.07 | enet | 20 | 0.04 | 3.3e-04 | 3.977 | -6.0 | 2.5e-09 | 0.02 | 0.43 | 0.02 | FALSE |
27 | GTEx | Brain Caudate basal ganglia | CTB-50L17.9 | 0.27 | 0.25 | lasso | 2 | 0.24 | 1.8e-07 | 5.634 | -5.3 | 1.0e-07 | -0.03 | 0.42 | 0.03 | FALSE |
28 | GTEx | Brain Cerebellar Hemisphere | ANKRD24 | 0.64 | 0.16 | lasso | 6 | 0.14 | 1.9e-04 | -6.676 | -7.0 | 2.9e-12 | 0.11 | 0.27 | 0.05 | FALSE |
29 | GTEx | Brain Cerebellar Hemisphere | CHAF1A | 0.62 | 0.40 | lasso | 8 | 0.36 | 3.5e-10 | 5.634 | -5.6 | 2.4e-08 | -0.04 | 0.98 | 0.00 | FALSE |
30 | GTEx | Brain Cerebellar Hemisphere | AC007292.6 | 0.28 | 0.11 | lasso | 5 | 0.18 | 2.0e-05 | 4.715 | -5.2 | 1.5e-07 | -0.04 | 0.35 | 0.04 | FALSE |
31 | GTEx | Brain Cerebellum | CHAF1A | 0.51 | 0.35 | lasso | 4 | 0.34 | 9.7e-11 | 5.634 | -5.7 | 1.6e-08 | -0.03 | 1.00 | 0.00 | FALSE |
32 | GTEx | Brain Cortex | AMH | 0.47 | 0.18 | lasso | 6 | 0.14 | 1.3e-04 | -7.046 | 8.0 | 1.2e-15 | -0.20 | 0.28 | 0.04 | FALSE |
33 | GTEx | Brain Cortex | CHAF1A | 0.27 | 0.16 | enet | 17 | 0.12 | 2.5e-04 | 5.496 | -5.3 | 1.5e-07 | 0.00 | 0.14 | 0.05 | FALSE |
34 | GTEx | Brain Frontal Cortex BA9 | AC007292.6 | 0.35 | 0.01 | lasso | 6 | 0.12 | 3.6e-04 | 0.393 | -5.2 | 1.8e-07 | 0.02 | 0.08 | 0.05 | FALSE |
35 | GTEx | Brain Nucleus accumbens basal ganglia | CHAF1A | 0.31 | 0.28 | lasso | 2 | 0.24 | 4.0e-07 | 5.496 | -5.5 | 4.5e-08 | -0.03 | 0.52 | 0.13 | FALSE |
36 | GTEx | Brain Nucleus accumbens basal ganglia | CTB-50L17.9 | 0.45 | 0.25 | lasso | 8 | 0.23 | 8.6e-07 | 5.634 | -5.2 | 2.7e-07 | -0.02 | 0.59 | 0.03 | FALSE |
37 | GTEx | Breast Mammary Tissue | CHAF1A | 0.39 | 0.25 | enet | 25 | 0.26 | 7.1e-14 | 4.791 | -6.2 | 4.2e-10 | -0.03 | 1.00 | 0.00 | FALSE |
38 | GTEx | Breast Mammary Tissue (Male) | CTB-50L17.5 | 0.26 | -0.01 | enet | 23 | 0.03 | 7.9e-02 | 4.855 | -7.2 | 6.7e-13 | -0.02 | 0.06 | 0.07 | TRUE |
39 | GTEx | Breast Mammary Tissue (Female) | AMH | 0.51 | 0.12 | lasso | 7 | 0.15 | 2.6e-05 | -7.439 | 7.5 | 8.0e-14 | -0.02 | 0.13 | 0.06 | FALSE |
40 | GTEx | Breast Mammary Tissue (Female) | CHAF1A | 0.33 | 0.14 | lasso | 6 | 0.09 | 1.6e-03 | 5.496 | -5.6 | 2.8e-08 | -0.04 | 0.36 | 0.03 | FALSE |
41 | GTEx | Breast Mammary Tissue (Female) | AC005786.7 | 0.21 | -0.01 | enet | 13 | 0.02 | 7.5e-02 | 3.977 | -5.1 | 2.8e-07 | -0.02 | 0.05 | 0.08 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | ANKRD24 | 0.14 | 0.07 | enet | 30 | 0.09 | 1.8e-07 | -6.981 | -6.5 | 8.9e-11 | 0.09 | 0.90 | 0.01 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | POLR2E | 0.20 | 0.09 | lasso | 5 | 0.16 | 2.7e-12 | -5.094 | -5.5 | 4.9e-08 | 0.06 | 0.89 | 0.11 | TRUE |
44 | GTEx | Cells Transformed fibroblasts | AMH | 0.30 | 0.18 | enet | 18 | 0.18 | 1.1e-13 | -6.892 | 7.8 | 4.5e-15 | -0.07 | 1.00 | 0.00 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | AC005306.3 | 0.10 | 0.01 | enet | 25 | 0.01 | 7.3e-02 | 0.206 | -7.8 | 6.4e-15 | 0.14 | 0.10 | 0.04 | FALSE |
46 | GTEx | Colon Sigmoid | MAP2K2 | 0.20 | 0.11 | lasso | 3 | 0.13 | 3.0e-05 | 9.454 | 10.1 | 4.3e-24 | 0.00 | 0.02 | 0.89 | TRUE |
47 | GTEx | Colon Sigmoid | CHAF1A | 0.33 | 0.08 | lasso | 5 | 0.12 | 7.5e-05 | 5.496 | -5.8 | 9.0e-09 | -0.03 | 0.59 | 0.02 | FALSE |
48 | GTEx | Colon Sigmoid | UBXN6 | 0.34 | 0.15 | lasso | 6 | 0.14 | 1.7e-05 | 4.827 | -5.5 | 5.0e-08 | -0.03 | 0.69 | 0.02 | FALSE |
49 | GTEx | Colon Transverse | AMH | 0.25 | 0.12 | enet | 35 | 0.16 | 2.8e-08 | -7.046 | 5.4 | 6.8e-08 | -0.08 | 0.92 | 0.00 | TRUE |
50 | GTEx | Colon Transverse | PTPRS | 0.17 | -0.01 | enet | 21 | 0.03 | 1.9e-02 | 5.083 | -10.0 | 1.5e-23 | -0.01 | 0.05 | 0.31 | TRUE |
51 | GTEx | Colon Transverse | CHAF1A | 0.28 | 0.06 | lasso | 10 | 0.15 | 1.4e-07 | -3.284 | -5.2 | 2.2e-07 | -0.04 | 0.99 | 0.00 | FALSE |
52 | GTEx | Colon Transverse | C19orf24 | 0.40 | 0.11 | lasso | 5 | 0.08 | 7.7e-05 | -4.291 | 5.2 | 2.6e-07 | -0.01 | 0.96 | 0.00 | TRUE |
53 | GTEx | Colon Transverse | AC007292.4 | 0.16 | 0.05 | lasso | 4 | 0.00 | 1.9e-01 | -0.594 | -5.4 | 5.6e-08 | -0.02 | 0.15 | 0.06 | FALSE |
54 | GTEx | Esophagus Gastroesophageal Junction | AMH | 0.34 | 0.11 | lasso | 6 | 0.16 | 2.1e-06 | -3.122 | 6.2 | 6.5e-10 | 0.11 | 0.38 | 0.03 | TRUE |
55 | GTEx | Esophagus Gastroesophageal Junction | CHAF1A | 0.30 | 0.25 | enet | 16 | 0.29 | 5.1e-11 | 4.715 | -5.4 | 5.4e-08 | -0.04 | 0.99 | 0.00 | FALSE |
56 | GTEx | Esophagus Mucosa | AMH | 0.33 | 0.06 | lasso | 5 | 0.18 | 2.1e-12 | -6.892 | 6.6 | 3.4e-11 | 0.00 | 1.00 | 0.00 | FALSE |
57 | GTEx | Esophagus Mucosa | C19orf25 | 0.13 | 0.00 | enet | 19 | 0.00 | 6.9e-01 | 6.045 | -7.6 | 2.7e-14 | 0.00 | 0.04 | 0.17 | TRUE |
58 | GTEx | Esophagus Mucosa | CTB-50L17.5 | 0.20 | 0.04 | enet | 26 | 0.07 | 2.5e-05 | 9.375 | 10.0 | 1.1e-23 | -0.01 | 0.40 | 0.27 | FALSE |
59 | GTEx | Esophagus Mucosa | AC005786.7 | 0.11 | 0.01 | lasso | 3 | 0.04 | 1.7e-03 | 2.886 | -5.5 | 3.4e-08 | -0.04 | 0.07 | 0.05 | TRUE |
60 | GTEx | Esophagus Muscularis | SIRT6 | 0.14 | 0.07 | lasso | 6 | 0.04 | 1.4e-03 | -6.867 | -6.5 | 5.9e-11 | 0.09 | 0.16 | 0.04 | FALSE |
61 | GTEx | Esophagus Muscularis | DOT1L | 0.12 | 0.03 | lasso | 5 | 0.05 | 6.3e-04 | 18.586 | 12.1 | 1.2e-33 | -0.82 | 0.01 | 0.97 | FALSE |
62 | GTEx | Esophagus Muscularis | AMH | 0.24 | 0.18 | lasso | 5 | 0.18 | 4.5e-11 | -7.046 | 7.7 | 1.5e-14 | -0.20 | 1.00 | 0.00 | FALSE |
63 | GTEx | Esophagus Muscularis | NFIC | 0.21 | 0.03 | enet | 35 | 0.07 | 4.9e-05 | 5.033 | -8.5 | 2.4e-17 | 0.02 | 0.10 | 0.04 | FALSE |
64 | GTEx | Esophagus Muscularis | CHAF1A | 0.45 | 0.37 | enet | 17 | 0.49 | 4.2e-33 | 5.496 | -5.7 | 9.4e-09 | -0.03 | 1.00 | 0.00 | FALSE |
65 | GTEx | Esophagus Muscularis | UBXN6 | 0.35 | 0.24 | enet | 20 | 0.29 | 3.7e-18 | 4.827 | -6.0 | 2.3e-09 | -0.03 | 1.00 | 0.00 | FALSE |
66 | GTEx | Esophagus Muscularis | AC011558.5 | 0.26 | 0.00 | enet | 32 | 0.02 | 1.4e-02 | 0.011 | -5.3 | 1.4e-07 | 0.01 | 0.07 | 0.06 | TRUE |
67 | GTEx | Esophagus Muscularis | CTB-50L17.5 | 0.28 | 0.17 | lasso | 3 | 0.19 | 6.7e-12 | 5.843 | -6.0 | 2.2e-09 | -0.05 | 1.00 | 0.00 | FALSE |
68 | GTEx | Esophagus Muscularis | AC007292.6 | 0.13 | 0.08 | lasso | 2 | 0.05 | 4.9e-04 | 4.825 | -5.2 | 2.7e-07 | -0.04 | 0.60 | 0.02 | FALSE |
69 | GTEx | Heart Atrial Appendage | CHAF1A | 0.28 | 0.19 | enet | 12 | 0.19 | 4.9e-09 | 5.496 | -5.5 | 3.5e-08 | -0.04 | 1.00 | 0.00 | FALSE |
70 | GTEx | Heart Left Ventricle | CHAF1A | 0.17 | 0.12 | lasso | 2 | 0.11 | 1.9e-06 | 5.634 | -5.7 | 1.6e-08 | -0.04 | 0.84 | 0.01 | FALSE |
71 | GTEx | Heart Left Ventricle | AC007292.4 | 0.18 | 0.00 | enet | 32 | 0.03 | 7.0e-03 | -1.540 | -5.2 | 2.0e-07 | 0.02 | 0.05 | 0.42 | FALSE |
72 | GTEx | Lung | ANKRD24 | 0.16 | 0.13 | enet | 12 | 0.12 | 8.3e-10 | -6.705 | -6.2 | 6.2e-10 | 0.10 | 1.00 | 0.00 | FALSE |
73 | GTEx | Lung | AMH | 0.28 | 0.17 | lasso | 4 | 0.15 | 1.0e-11 | -6.892 | 7.3 | 2.5e-13 | -0.04 | 1.00 | 0.00 | FALSE |
74 | GTEx | Lung | SH2D3A | 0.16 | 0.00 | enet | 43 | 0.01 | 8.4e-02 | -1.908 | 7.0 | 2.0e-12 | -0.01 | 0.09 | 0.03 | TRUE |
75 | GTEx | Lung | CHAF1A | 0.25 | 0.09 | lasso | 4 | 0.17 | 2.7e-13 | 5.496 | -5.2 | 1.9e-07 | -0.03 | 1.00 | 0.00 | FALSE |
76 | GTEx | Lung | CTB-50L17.5 | 0.24 | 0.05 | enet | 43 | 0.10 | 2.2e-08 | 5.634 | -7.1 | 1.7e-12 | -0.04 | 0.99 | 0.00 | FALSE |
77 | GTEx | Muscle Skeletal | ANKRD24 | 0.13 | 0.08 | enet | 9 | 0.07 | 8.1e-08 | -6.648 | -6.7 | 3.0e-11 | 0.10 | 1.00 | 0.00 | FALSE |
78 | GTEx | Muscle Skeletal | AMH | 0.13 | 0.07 | lasso | 3 | 0.06 | 1.7e-06 | -7.046 | 7.6 | 2.8e-14 | -0.16 | 0.97 | 0.00 | FALSE |
79 | GTEx | Muscle Skeletal | CHAF1A | 0.18 | 0.21 | lasso | 2 | 0.20 | 9.7e-20 | 5.634 | -5.7 | 1.6e-08 | -0.03 | 1.00 | 0.00 | FALSE |
80 | GTEx | Muscle Skeletal | CTB-50L17.5 | 0.11 | 0.09 | lasso | 4 | 0.09 | 7.9e-09 | 5.496 | -5.7 | 1.5e-08 | -0.04 | 1.00 | 0.00 | FALSE |
81 | GTEx | Nerve Tibial | IZUMO4 | 0.23 | 0.07 | lasso | 6 | 0.14 | 1.9e-10 | -4.172 | -11.8 | 2.4e-32 | 0.70 | 0.03 | 0.97 | FALSE |
82 | GTEx | Nerve Tibial | PLIN3 | 0.15 | 0.00 | enet | 25 | 0.02 | 7.8e-03 | 15.370 | 9.0 | 1.6e-19 | -0.02 | 0.14 | 0.03 | FALSE |
83 | GTEx | Nerve Tibial | MFSD12 | 0.17 | 0.02 | lasso | 4 | 0.03 | 1.8e-03 | 2.680 | -6.1 | 1.2e-09 | -0.04 | 0.24 | 0.07 | FALSE |
84 | GTEx | Nerve Tibial | CHAF1A | 0.35 | 0.31 | lasso | 8 | 0.36 | 1.3e-26 | 5.496 | -5.8 | 7.9e-09 | -0.04 | 1.00 | 0.00 | FALSE |
85 | GTEx | Nerve Tibial | CTB-50L17.5 | 0.11 | 0.08 | enet | 4 | 0.08 | 1.6e-06 | 5.496 | -5.5 | 5.0e-08 | -0.04 | 0.98 | 0.00 | FALSE |
86 | GTEx | Nerve Tibial | CTC-518P12.6 | 0.17 | 0.01 | enet | 23 | 0.05 | 2.8e-04 | 15.370 | 7.2 | 4.4e-13 | -0.12 | 0.25 | 0.03 | FALSE |
87 | GTEx | Prostate | ZNF557 | 0.41 | -0.01 | lasso | 8 | 0.00 | 2.7e-01 | 11.362 | 12.3 | 1.5e-34 | -0.04 | 0.05 | 0.10 | TRUE |
88 | GTEx | Prostate | UBXN6 | 0.27 | 0.15 | enet | 19 | 0.14 | 2.4e-04 | 4.827 | -7.7 | 1.3e-14 | -0.04 | 0.12 | 0.05 | FALSE |
89 | GTEx | Skin Not Sun Exposed Suprapubic | CHAF1A | 0.27 | 0.22 | lasso | 5 | 0.24 | 2.8e-13 | 4.827 | -5.2 | 1.7e-07 | -0.03 | 1.00 | 0.00 | FALSE |
90 | GTEx | Skin Not Sun Exposed Suprapubic | CTB-50L17.5 | 0.17 | 0.13 | enet | 21 | 0.15 | 2.0e-08 | 5.843 | -5.3 | 1.4e-07 | -0.04 | 0.89 | 0.00 | FALSE |
91 | GTEx | Skin Not Sun Exposed Suprapubic | AC007292.6 | 0.11 | 0.08 | lasso | 6 | 0.07 | 7.8e-05 | 5.843 | -5.8 | 7.1e-09 | -0.05 | 0.43 | 0.02 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | AMH | 0.23 | 0.10 | lasso | 6 | 0.13 | 8.5e-11 | -7.046 | 7.8 | 8.4e-15 | -0.16 | 1.00 | 0.00 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | CHAF1A | 0.19 | 0.18 | lasso | 1 | 0.17 | 5.1e-14 | 5.496 | -5.5 | 3.9e-08 | -0.03 | 1.00 | 0.00 | FALSE |
94 | GTEx | Skin Sun Exposed Lower leg | AC004490.1 | 0.09 | 0.07 | enet | 11 | 0.10 | 2.3e-08 | -9.330 | 7.6 | 3.2e-14 | -0.52 | 0.82 | 0.12 | FALSE |
95 | GTEx | Small Intestine Terminal Ileum | AMH | 0.36 | -0.01 | lasso | 14 | -0.01 | 6.4e-01 | -0.017 | 5.4 | 5.2e-08 | -0.16 | 0.05 | 0.06 | TRUE |
96 | GTEx | Testis | ANKRD24 | 0.44 | 0.18 | lasso | 7 | 0.19 | 5.0e-09 | -6.705 | -6.4 | 1.3e-10 | 0.10 | 0.99 | 0.00 | FALSE |
97 | GTEx | Testis | MFSD12 | 0.23 | 0.11 | enet | 13 | 0.15 | 2.9e-07 | 1.547 | -5.2 | 1.6e-07 | -0.01 | 0.73 | 0.07 | FALSE |
98 | GTEx | Testis | CHAF1A | 0.18 | 0.09 | lasso | 2 | 0.07 | 4.0e-04 | 5.634 | -5.5 | 4.8e-08 | -0.03 | 0.15 | 0.04 | FALSE |
99 | GTEx | Testis | AC005786.7 | 0.36 | 0.19 | enet | 30 | 0.27 | 1.7e-12 | 3.928 | -5.6 | 2.6e-08 | 0.01 | 0.99 | 0.00 | FALSE |
100 | GTEx | Thyroid | SIRT6 | 0.24 | 0.20 | lasso | 5 | 0.21 | 3.9e-16 | -6.705 | -6.7 | 2.9e-11 | 0.10 | 1.00 | 0.00 | FALSE |
101 | GTEx | Thyroid | AMH | 0.30 | 0.13 | lasso | 6 | 0.20 | 5.3e-15 | -7.439 | 8.2 | 2.3e-16 | -0.17 | 1.00 | 0.00 | TRUE |
102 | GTEx | Thyroid | CHAF1A | 0.29 | 0.24 | lasso | 6 | 0.26 | 3.0e-20 | 5.496 | -5.5 | 2.8e-08 | -0.04 | 1.00 | 0.00 | FALSE |
103 | GTEx | Thyroid | UBXN6 | 0.25 | 0.19 | lasso | 5 | 0.23 | 8.8e-18 | 5.843 | -5.5 | 3.1e-08 | -0.05 | 1.00 | 0.00 | FALSE |
104 | GTEx | Vagina | FZR1 | 0.37 | -0.01 | lasso | 8 | 0.01 | 2.2e-01 | 2.510 | -6.6 | 3.9e-11 | -0.01 | 0.04 | 0.12 | TRUE |
105 | GTEx | Vagina | CTB-50L17.9 | 0.38 | 0.26 | lasso | 5 | 0.23 | 5.7e-06 | 5.634 | -5.6 | 2.7e-08 | -0.05 | 0.38 | 0.04 | FALSE |
106 | NTR | Blood | ARRDC5 | 0.04 | 0.00 | lasso | 6 | 0.01 | 4.3e-04 | 15.370 | 8.0 | 1.6e-15 | -0.07 | 0.65 | 0.01 | FALSE |
107 | NTR | Blood | C19orf24 | 0.07 | 0.09 | bslmm | 168 | 0.09 | 4.0e-26 | -4.224 | -5.1 | 3.0e-07 | 0.01 | 1.00 | 0.00 | FALSE |
108 | NTR | Blood | C19orf35 | 0.03 | 0.01 | enet | 9 | 0.02 | 3.7e-07 | -4.510 | -8.6 | 1.3e-17 | 0.38 | 0.96 | 0.02 | FALSE |
109 | NTR | Blood | TMPRSS9 | 0.04 | 0.02 | lasso | 4 | 0.04 | 1.3e-11 | -0.496 | -6.2 | 5.9e-10 | 0.33 | 0.99 | 0.01 | FALSE |
110 | ROSMAP | Brain Pre-frontal Cortex | SIRT6 | 0.24 | 0.23 | lasso | 7 | 0.23 | 1.2e-29 | -6.705 | -6.7 | 1.7e-11 | 0.09 | 1.00 | 0.00 | FALSE |
111 | ROSMAP | Brain Pre-frontal Cortex | AMH | 0.40 | 0.43 | lasso | 3 | 0.46 | 4.8e-67 | -6.808 | 7.2 | 4.6e-13 | -0.04 | 1.00 | 0.00 | FALSE |
112 | ROSMAP | Brain Pre-frontal Cortex | PIAS4 | 0.14 | 0.12 | lasso | 6 | 0.11 | 1.6e-13 | 7.631 | 8.2 | 2.5e-16 | 0.00 | 1.00 | 0.00 | FALSE |
113 | ROSMAP | Brain Pre-frontal Cortex | CAPS | 0.08 | 0.06 | lasso | 6 | 0.06 | 2.5e-08 | 6.588 | 5.7 | 1.1e-08 | 0.00 | 0.42 | 0.58 | FALSE |
114 | ROSMAP | Brain Pre-frontal Cortex | CHAF1A | 0.22 | 0.23 | lasso | 2 | 0.28 | 1.1e-36 | 5.496 | -5.5 | 5.0e-08 | -0.04 | 1.00 | 0.00 | FALSE |
115 | ROSMAP | Brain Pre-frontal Cortex | MIR7-3HG | 0.39 | 0.35 | lasso | 3 | 0.37 | 6.0e-50 | -7.298 | 7.0 | 2.4e-12 | 0.02 | 1.00 | 0.00 | TRUE |
116 | YFS | Blood | AMH | 0.07 | 0.07 | lasso | 5 | 0.07 | 4.2e-21 | -6.808 | 7.4 | 1.9e-13 | -0.06 | 1.00 | 0.00 | FALSE |
117 | YFS | Blood | ANKRD24 | 0.04 | 0.01 | lasso | 6 | 0.01 | 6.0e-05 | -6.675 | -7.1 | 9.1e-13 | 0.09 | 0.94 | 0.00 | TRUE |
118 | YFS | Blood | ARRDC5 | 0.29 | 0.19 | enet | 62 | 0.24 | 3.8e-78 | 15.084 | 9.4 | 4.3e-21 | -0.09 | 1.00 | 0.00 | FALSE |
119 | YFS | Blood | DPP9 | 0.04 | 0.04 | bslmm | 421 | 0.04 | 1.8e-12 | -5.215 | -5.2 | 2.3e-07 | 0.00 | 1.00 | 0.00 | TRUE |
120 | YFS | Blood | JSRP1 | 0.11 | 0.04 | lasso | 7 | 0.07 | 1.4e-21 | -2.717 | -6.8 | 9.5e-12 | 0.09 | 1.00 | 0.00 | FALSE |
121 | YFS | Blood | MAP2K2 | 0.02 | 0.00 | blup | 373 | 0.01 | 5.9e-03 | -6.373 | -8.4 | 6.3e-17 | -0.02 | 0.01 | 0.94 | FALSE |
122 | YFS | Blood | PIAS4 | 0.06 | 0.02 | bslmm | 369 | 0.04 | 4.8e-14 | 7.631 | 9.7 | 3.4e-22 | 0.05 | 0.14 | 0.86 | FALSE |
123 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | AMH | 0.07 | 0.06 | enet | 8 | 0.07 | 2.9e-06 | -6.892 | 7.5 | 5.1e-14 | -0.14 | 0.93 | 0.01 | FALSE |
124 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | AP3D1 | 0.05 | 0.00 | blup | 49 | 0.02 | 1.7e-02 | -3.868 | 8.0 | 1.3e-15 | -0.31 | 0.03 | 0.07 | TRUE |
125 | The Cancer Genome Atlas | Breast Invasive Carcinoma | AMH | 0.03 | 0.04 | lasso | 2 | 0.04 | 2.8e-08 | -7.439 | 7.5 | 9.0e-14 | -0.04 | 1.00 | 0.00 | FALSE |
126 | The Cancer Genome Atlas | Breast Invasive Carcinoma | AP3D1 | 0.01 | 0.01 | blup | 52 | 0.01 | 5.4e-03 | -3.868 | 12.1 | 1.4e-33 | -0.54 | 0.05 | 0.12 | FALSE |
127 | The Cancer Genome Atlas | Breast Invasive Carcinoma | JSRP1 | 0.03 | 0.01 | blup | 33 | 0.01 | 2.0e-02 | -4.510 | -7.2 | 7.4e-13 | 0.11 | 0.04 | 0.10 | FALSE |
128 | The Cancer Genome Atlas | Colon Adenocarcinoma | AMH | 0.12 | 0.10 | lasso | 3 | 0.08 | 2.9e-05 | -7.676 | 7.8 | 8.6e-15 | -0.02 | 0.82 | 0.01 | FALSE |
129 | The Cancer Genome Atlas | Glioblastoma Multiforme | AMH | 0.13 | 0.13 | lasso | 2 | 0.12 | 1.4e-04 | -7.439 | 7.4 | 1.4e-13 | -0.08 | 0.07 | 0.08 | FALSE |
130 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | AMH | 0.09 | 0.08 | lasso | 3 | 0.09 | 8.3e-10 | -6.892 | 7.6 | 3.4e-14 | -0.11 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PLIN4 | 0.06 | 0.01 | blup | 49 | 0.01 | 2.5e-02 | 4.903 | -5.6 | 2.1e-08 | 0.01 | 0.01 | 0.62 | FALSE |
132 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | UBXN6 | 0.05 | 0.01 | blup | 57 | 0.04 | 6.6e-05 | 5.634 | -6.9 | 5.1e-12 | -0.04 | 0.00 | 0.99 | TRUE |
133 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | AMH | 0.04 | 0.03 | blup | 35 | 0.02 | 1.3e-03 | -6.892 | 10.1 | 3.9e-24 | -0.21 | 0.26 | 0.20 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CHAF1A | 0.12 | 0.11 | lasso | 3 | 0.12 | 7.9e-13 | 5.496 | -5.6 | 2.5e-08 | -0.05 | 0.00 | 1.00 | FALSE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DOT1L | 0.08 | 0.12 | enet | 8 | 0.10 | 2.5e-11 | 18.586 | 19.4 | 1.1e-83 | -0.96 | 0.02 | 0.98 | TRUE |
136 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | GPX4 | 0.12 | 0.11 | lasso | 4 | 0.12 | 3.9e-13 | 6.189 | 6.0 | 2.7e-09 | -0.03 | 0.00 | 1.00 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | RFX2 | 0.07 | 0.03 | blup | 72 | 0.02 | 8.7e-04 | 6.029 | -5.9 | 3.0e-09 | -0.01 | 0.00 | 0.95 | TRUE |
138 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | AMH | 0.10 | 0.10 | lasso | 2 | 0.09 | 7.7e-06 | -7.439 | 7.5 | 5.8e-14 | -0.05 | 0.88 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CHAF1A | 0.15 | 0.12 | lasso | 2 | 0.12 | 3.2e-07 | 5.496 | -5.4 | 7.5e-08 | -0.04 | 0.02 | 0.98 | FALSE |
140 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FZR1 | 0.21 | 0.07 | lasso | 3 | 0.07 | 5.6e-05 | -9.750 | -10.5 | 1.1e-25 | 0.07 | 0.00 | 0.97 | FALSE |
141 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | JSRP1 | 0.07 | 0.04 | blup | 33 | 0.03 | 7.8e-03 | -7.046 | 9.8 | 7.4e-23 | -0.43 | 0.01 | 0.10 | FALSE |
142 | The Cancer Genome Atlas | Brain Lower Grade Glioma | AMH | 0.15 | 0.22 | lasso | 3 | 0.22 | 4.5e-25 | -6.808 | 7.5 | 8.3e-14 | -0.08 | 1.00 | 0.00 | FALSE |
143 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C19orf30 | 0.03 | 0.03 | lasso | 3 | 0.04 | 2.2e-05 | -7.298 | 5.3 | 8.9e-08 | 0.01 | 0.02 | 0.84 | FALSE |
144 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CHAF1A | 0.17 | 0.14 | lasso | 4 | 0.16 | 1.1e-17 | 5.496 | -5.7 | 1.0e-08 | -0.04 | 0.01 | 0.99 | FALSE |
145 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | AMH | 0.17 | 0.09 | blup | 35 | 0.12 | 2.5e-06 | -7.676 | 7.0 | 2.9e-12 | -0.05 | 0.48 | 0.09 | FALSE |
146 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | C19orf77 | 0.16 | 0.12 | lasso | 3 | 0.14 | 3.6e-07 | 3.928 | 7.6 | 3.5e-14 | -0.04 | 0.80 | 0.01 | FALSE |
147 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | DOT1L | 0.09 | 0.08 | blup | 60 | 0.07 | 4.1e-04 | -14.523 | 16.1 | 1.4e-58 | -0.87 | 0.02 | 0.95 | FALSE |
148 | The Cancer Genome Atlas | Lung Adenocarcinoma | AMH | 0.08 | 0.08 | lasso | 2 | 0.09 | 3.9e-11 | -7.128 | 8.0 | 1.6e-15 | -0.18 | 1.00 | 0.00 | FALSE |
149 | The Cancer Genome Atlas | Lung Adenocarcinoma | CHAF1A | 0.05 | 0.04 | lasso | 4 | 0.03 | 2.3e-04 | 5.634 | -5.8 | 4.9e-09 | -0.03 | 0.01 | 0.98 | FALSE |
150 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | JSRP1 | 0.03 | 0.00 | blup | 33 | 0.02 | 2.1e-03 | -4.388 | -10.9 | 9.4e-28 | 0.18 | 0.01 | 0.27 | FALSE |
151 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | UBXN6 | 0.04 | 0.03 | lasso | 2 | 0.02 | 1.6e-03 | 4.827 | -5.4 | 8.5e-08 | -0.03 | 0.00 | 0.94 | FALSE |
152 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | AMH | 0.06 | 0.07 | lasso | 1 | 0.06 | 1.1e-04 | -6.892 | 6.9 | 5.5e-12 | 0.01 | 0.27 | 0.04 | FALSE |
153 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | FUT5 | 0.08 | 0.04 | blup | 62 | 0.07 | 1.8e-05 | -2.345 | -5.3 | 8.6e-08 | 0.01 | 0.03 | 0.12 | FALSE |
154 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | AMH | 0.10 | 0.05 | blup | 35 | 0.04 | 1.2e-02 | -3.412 | 6.5 | 6.3e-11 | 0.09 | 0.14 | 0.09 | FALSE |
155 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | C19orf35 | 0.20 | 0.00 | enet | 9 | 0.08 | 4.2e-04 | -2.841 | -5.9 | 4.3e-09 | 0.17 | 0.00 | 0.38 | TRUE |
156 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | AMH | 0.14 | 0.14 | lasso | 3 | 0.11 | 5.2e-05 | -6.808 | 6.4 | 1.6e-10 | 0.05 | 0.20 | 0.32 | FALSE |
157 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | C19orf28 | 0.12 | 0.02 | lasso | 4 | 0.03 | 1.9e-02 | 5.033 | -5.4 | 8.4e-08 | 0.10 | 0.01 | 0.40 | FALSE |
158 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CHAF1A | 0.20 | 0.11 | lasso | 2 | 0.11 | 5.6e-05 | 5.843 | -5.9 | 2.8e-09 | -0.05 | 0.00 | 0.99 | FALSE |
159 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | UBXN6 | 0.23 | 0.11 | lasso | 5 | 0.12 | 2.5e-05 | 4.827 | -5.6 | 1.7e-08 | -0.06 | 0.01 | 0.80 | FALSE |
160 | The Cancer Genome Atlas | Prostate Adenocarcinoma | AMH | 0.17 | 0.14 | enet | 11 | 0.15 | 1.9e-15 | -7.439 | 7.3 | 3.7e-13 | -0.11 | 1.00 | 0.00 | FALSE |
161 | The Cancer Genome Atlas | Prostate Adenocarcinoma | AP3D1 | 0.06 | 0.05 | enet | 7 | 0.04 | 5.7e-05 | -3.868 | 5.3 | 1.3e-07 | -0.25 | 0.85 | 0.04 | FALSE |
162 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CHAF1A | 0.13 | 0.09 | lasso | 6 | 0.10 | 3.5e-10 | 5.634 | -5.8 | 5.2e-09 | -0.04 | 0.00 | 1.00 | FALSE |
163 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GPX4 | 0.21 | 0.15 | lasso | 4 | 0.14 | 6.9e-15 | 6.189 | 6.2 | 6.2e-10 | -0.02 | 0.00 | 1.00 | FALSE |
164 | The Cancer Genome Atlas | Prostate Adenocarcinoma | UBXN6 | 0.13 | 0.10 | lasso | 2 | 0.10 | 1.3e-10 | 5.634 | -5.8 | 5.6e-09 | -0.04 | 0.00 | 1.00 | FALSE |
165 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CREB3L3 | 0.34 | 0.12 | lasso | 4 | 0.13 | 5.6e-04 | -6.867 | -6.9 | 7.1e-12 | 0.08 | 0.07 | 0.06 | FALSE |
166 | The Cancer Genome Atlas | Stomach Adenocarcinoma | AMH | 0.05 | 0.06 | lasso | 3 | 0.05 | 9.5e-05 | -6.808 | 6.8 | 8.9e-12 | 0.02 | 0.43 | 0.06 | FALSE |
167 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | AMH | 0.18 | 0.14 | lasso | 4 | 0.06 | 2.6e-03 | -7.046 | 8.4 | 3.0e-17 | -0.34 | 0.08 | 0.51 | TRUE |
168 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | DOT1L | 0.40 | -0.01 | enet | 20 | 0.03 | 3.6e-02 | -7.676 | 11.9 | 6.6e-33 | -0.44 | 0.01 | 0.21 | FALSE |
169 | The Cancer Genome Atlas | Thyroid Carcinoma | AMH | 0.08 | 0.12 | lasso | 4 | 0.12 | 2.4e-11 | -6.892 | 7.2 | 4.7e-13 | -0.02 | 1.00 | 0.00 | FALSE |
170 | The Cancer Genome Atlas | Thyroid Carcinoma | CHAF1A | 0.22 | 0.19 | lasso | 3 | 0.20 | 5.4e-19 | 5.496 | -5.8 | 9.0e-09 | -0.04 | 0.01 | 0.99 | FALSE |
171 | The Cancer Genome Atlas | Thyroid Carcinoma | KDM4B | 0.05 | 0.05 | lasso | 2 | 0.04 | 4.7e-05 | 11.551 | 9.2 | 2.5e-20 | -0.03 | 0.47 | 0.04 | TRUE |
172 | The Cancer Genome Atlas | Thyroid Carcinoma | POLR2E | 0.14 | 0.08 | lasso | 8 | 0.10 | 7.3e-10 | -3.825 | -6.2 | 7.8e-10 | -0.05 | 0.10 | 0.90 | FALSE |
173 | The Cancer Genome Atlas | Thyroid Carcinoma | UBXN6 | 0.16 | 0.12 | lasso | 2 | 0.12 | 5.4e-12 | 5.634 | -5.6 | 2.5e-08 | -0.04 | 0.00 | 1.00 | FALSE |
174 | The Cancer Genome Atlas | Thyroid Carcinoma | ZNF557 | 0.05 | 0.02 | blup | 38 | 0.03 | 6.2e-04 | 6.241 | 5.1 | 3.0e-07 | -0.09 | 0.19 | 0.30 | FALSE |