Best TWAS P=3.46e-171 · Best GWAS P=1.37e-156 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | FAM114A1 | 0.07 | 0.01 | enet | 32 | 0.02 | 3.9e-03 | 5.76 | 8.5 | 1.7e-17 | 0.23 | 0.63 | 0.01 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FLJ13197 | 0.13 | 0.10 | bslmm | 608 | 0.10 | 8.8e-13 | -12.77 | 18.0 | 4.3e-72 | 0.41 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | TLR6 | 0.13 | 0.05 | bslmm | 513 | 0.08 | 2.1e-10 | 5.67 | -5.1 | 2.7e-07 | -0.17 | 1.00 | 0.00 | FALSE |
4 | GTEx | Adipose Subcutaneous | AC021860.1 | 0.32 | 0.28 | enet | 20 | 0.36 | 2.7e-30 | 26.41 | 27.5 | 3.1e-166 | 0.87 | 0.01 | 0.99 | FALSE |
5 | GTEx | Adipose Subcutaneous | FAM114A1 | 0.21 | 0.17 | lasso | 5 | 0.17 | 9.5e-14 | 7.26 | 7.4 | 9.8e-14 | 0.21 | 1.00 | 0.00 | TRUE |
6 | GTEx | Adipose Subcutaneous | RP11-617D20.1 | 0.28 | 0.26 | lasso | 6 | 0.28 | 2.4e-23 | 26.66 | 26.0 | 2.8e-149 | 0.95 | 0.00 | 1.00 | FALSE |
7 | GTEx | Adipose Visceral Omentum | AC021860.1 | 0.33 | 0.08 | lasso | 9 | 0.13 | 3.2e-07 | 26.42 | 25.8 | 6.2e-147 | 0.79 | 0.00 | 0.99 | FALSE |
8 | GTEx | Adipose Visceral Omentum | RP11-617D20.1 | 0.31 | 0.10 | enet | 21 | 0.17 | 3.9e-09 | 26.66 | 22.6 | 1.6e-113 | 0.80 | 0.00 | 1.00 | FALSE |
9 | GTEx | Adrenal Gland | AC021860.1 | 0.30 | 0.11 | lasso | 5 | 0.12 | 4.1e-05 | 26.60 | 26.8 | 9.6e-159 | 0.85 | 0.01 | 0.98 | FALSE |
10 | GTEx | Artery Aorta | AC021860.1 | 0.34 | 0.14 | lasso | 4 | 0.32 | 6.5e-18 | 18.57 | 25.3 | 8.9e-141 | 0.72 | 0.04 | 0.96 | FALSE |
11 | GTEx | Artery Aorta | RP11-617D20.1 | 0.27 | 0.18 | lasso | 6 | 0.24 | 1.6e-13 | 26.42 | 26.7 | 5.7e-157 | 0.88 | 0.01 | 0.99 | FALSE |
12 | GTEx | Artery Coronary | AC021860.1 | 0.30 | 0.01 | enet | 11 | 0.01 | 1.1e-01 | -12.79 | 13.2 | 1.6e-39 | 0.22 | 0.17 | 0.33 | FALSE |
13 | GTEx | Artery Tibial | AC021860.1 | 0.30 | 0.09 | enet | 30 | 0.22 | 1.5e-17 | 26.42 | 22.7 | 5.5e-114 | 0.70 | 0.02 | 0.98 | FALSE |
14 | GTEx | Artery Tibial | RP11-617D20.1 | 0.32 | 0.23 | enet | 39 | 0.28 | 5.0e-22 | 26.42 | 24.5 | 8.2e-133 | 0.85 | 0.01 | 0.99 | TRUE |
15 | GTEx | Brain Caudate basal ganglia | RP11-617D20.1 | 0.40 | 0.07 | enet | 44 | 0.15 | 5.6e-05 | -12.77 | 17.9 | 2.1e-71 | 0.49 | 0.06 | 0.70 | FALSE |
16 | GTEx | Brain Cerebellar Hemisphere | AC021860.1 | 0.50 | 0.30 | lasso | 6 | 0.34 | 1.7e-09 | 18.57 | 22.3 | 1.5e-110 | 0.60 | 0.12 | 0.74 | FALSE |
17 | GTEx | Brain Cerebellar Hemisphere | RP11-617D20.1 | 0.53 | 0.25 | lasso | 8 | 0.32 | 5.1e-09 | 18.57 | 17.0 | 5.0e-65 | 0.55 | 0.04 | 0.83 | FALSE |
18 | GTEx | Brain Cerebellar Hemisphere | RP11-360F5.3 | 0.40 | 0.03 | enet | 14 | 0.17 | 3.6e-05 | 3.81 | -6.2 | 5.3e-10 | -0.04 | 0.62 | 0.02 | FALSE |
19 | GTEx | Brain Cerebellum | AC021860.1 | 0.63 | 0.33 | lasso | 16 | 0.43 | 5.7e-14 | 18.57 | 23.4 | 8.5e-121 | 0.62 | 0.04 | 0.96 | FALSE |
20 | GTEx | Brain Cerebellum | RP11-617D20.1 | 0.59 | 0.23 | lasso | 8 | 0.39 | 1.0e-12 | 18.57 | 24.0 | 9.2e-127 | 0.77 | 0.01 | 0.99 | FALSE |
21 | GTEx | Brain Cortex | AC021860.1 | 0.42 | 0.32 | lasso | 3 | 0.38 | 1.3e-11 | -12.77 | 18.2 | 3.7e-74 | 0.34 | 0.87 | 0.08 | FALSE |
22 | GTEx | Brain Cortex | RP11-617D20.1 | 0.31 | 0.30 | enet | 18 | 0.36 | 8.9e-11 | -12.79 | 18.3 | 3.5e-75 | 0.42 | 0.69 | 0.23 | FALSE |
23 | GTEx | Brain Frontal Cortex BA9 | AC021860.1 | 0.52 | 0.23 | lasso | 13 | 0.24 | 3.6e-07 | -12.79 | 16.0 | 7.4e-58 | 0.33 | 0.46 | 0.18 | FALSE |
24 | GTEx | Brain Frontal Cortex BA9 | RP11-617D20.1 | 0.34 | 0.14 | lasso | 4 | 0.14 | 1.7e-04 | 18.57 | 19.5 | 2.9e-84 | 0.45 | 0.13 | 0.42 | FALSE |
25 | GTEx | Brain Hippocampus | AC021860.1 | 0.46 | 0.17 | enet | 35 | 0.19 | 2.8e-05 | -12.79 | 12.3 | 9.1e-35 | 0.22 | 0.19 | 0.18 | FALSE |
26 | GTEx | Brain Hippocampus | RP11-617D20.1 | 0.41 | 0.25 | lasso | 2 | 0.21 | 1.3e-05 | -12.79 | 16.2 | 5.2e-59 | 0.30 | 0.25 | 0.11 | FALSE |
27 | GTEx | Brain Hypothalamus | AC021860.1 | 0.51 | 0.00 | enet | 59 | 0.06 | 1.4e-02 | 21.32 | 17.0 | 1.7e-64 | 0.52 | 0.04 | 0.55 | FALSE |
28 | GTEx | Brain Nucleus accumbens basal ganglia | AC021860.1 | 0.37 | 0.05 | enet | 20 | 0.12 | 5.2e-04 | -12.79 | 18.4 | 9.5e-76 | 0.43 | 0.14 | 0.46 | FALSE |
29 | GTEx | Brain Nucleus accumbens basal ganglia | RP11-617D20.1 | 0.65 | 0.14 | lasso | 14 | 0.27 | 7.6e-08 | 18.57 | 18.9 | 2.5e-79 | 0.48 | 0.13 | 0.64 | FALSE |
30 | GTEx | Brain Putamen basal ganglia | RP11-617D20.1 | 0.44 | 0.12 | lasso | 7 | 0.26 | 8.3e-07 | 18.57 | 20.3 | 2.2e-91 | 0.60 | 0.07 | 0.78 | TRUE |
31 | GTEx | Breast Mammary Tissue | KLHL5 | 0.14 | 0.05 | lasso | 3 | 0.08 | 1.0e-04 | 3.81 | 5.2 | 1.7e-07 | 0.04 | 0.93 | 0.00 | FALSE |
32 | GTEx | Breast Mammary Tissue | AC021860.1 | 0.49 | 0.13 | enet | 29 | 0.27 | 2.2e-14 | 26.42 | 25.6 | 2.7e-144 | 0.77 | 0.01 | 0.99 | FALSE |
33 | GTEx | Breast Mammary Tissue | FAM114A1 | 0.11 | 0.04 | lasso | 3 | 0.05 | 1.0e-03 | 2.05 | 6.3 | 3.1e-10 | 0.16 | 0.34 | 0.03 | FALSE |
34 | GTEx | Breast Mammary Tissue | RP11-617D20.1 | 0.35 | 0.20 | lasso | 5 | 0.19 | 4.9e-10 | 26.42 | 26.8 | 6.7e-158 | 0.97 | 0.00 | 1.00 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | KLHL5 | 0.12 | 0.00 | lasso | 2 | 0.00 | 3.0e-01 | 6.12 | 5.9 | 4.2e-09 | 0.03 | 0.16 | 0.05 | FALSE |
36 | GTEx | Breast Mammary Tissue (Female) | AC021860.1 | 0.25 | 0.06 | lasso | 6 | 0.16 | 1.6e-05 | 21.32 | 23.9 | 2.0e-126 | 0.63 | 0.06 | 0.57 | FALSE |
37 | GTEx | Breast Mammary Tissue (Female) | RP11-617D20.1 | 0.16 | 0.12 | enet | 5 | 0.10 | 5.5e-04 | 21.32 | 23.9 | 2.1e-126 | 0.86 | 0.02 | 0.93 | FALSE |
38 | GTEx | Colon Sigmoid | KLHL5 | 0.23 | 0.00 | enet | 20 | 0.01 | 2.0e-01 | 3.30 | 7.2 | 4.7e-13 | 0.02 | 0.11 | 0.06 | FALSE |
39 | GTEx | Colon Sigmoid | AC021860.1 | 0.43 | 0.23 | lasso | 11 | 0.27 | 5.5e-10 | 26.66 | 27.9 | 3.5e-171 | 0.93 | 0.00 | 1.00 | TRUE |
40 | GTEx | Colon Sigmoid | RP11-617D20.1 | 0.45 | 0.34 | lasso | 8 | 0.34 | 9.5e-13 | 26.66 | 27.1 | 1.9e-161 | 0.97 | 0.00 | 1.00 | FALSE |
41 | GTEx | Colon Transverse | AC021860.1 | 0.32 | 0.10 | lasso | 10 | 0.07 | 2.4e-04 | 26.60 | 27.2 | 3.0e-163 | 0.95 | 0.01 | 0.99 | FALSE |
42 | GTEx | Esophagus Gastroesophageal Junction | AC021860.1 | 0.23 | 0.11 | enet | 14 | 0.11 | 8.9e-05 | 26.42 | 27.2 | 9.7e-163 | 0.89 | 0.01 | 0.99 | FALSE |
43 | GTEx | Esophagus Mucosa | TLR6 | 0.36 | 0.06 | lasso | 7 | 0.12 | 2.3e-08 | 7.98 | 7.2 | 4.6e-13 | 0.17 | 0.98 | 0.00 | FALSE |
44 | GTEx | Esophagus Mucosa | AC021860.1 | 0.30 | 0.21 | lasso | 7 | 0.31 | 4.9e-21 | 26.60 | 27.4 | 2.8e-165 | 0.86 | 0.00 | 1.00 | FALSE |
45 | GTEx | Esophagus Mucosa | FAM114A1 | 0.14 | 0.03 | lasso | 11 | 0.03 | 6.6e-03 | 8.38 | -6.8 | 1.0e-11 | -0.18 | 0.80 | 0.01 | TRUE |
46 | GTEx | Esophagus Mucosa | RP11-617D20.1 | 0.29 | 0.02 | enet | 35 | 0.09 | 2.5e-06 | 26.42 | 19.7 | 4.2e-86 | 0.67 | 0.01 | 0.99 | FALSE |
47 | GTEx | Esophagus Muscularis | AC021860.1 | 0.40 | 0.19 | enet | 24 | 0.36 | 3.9e-23 | 26.42 | 26.4 | 1.0e-153 | 0.77 | 0.01 | 0.99 | FALSE |
48 | GTEx | Esophagus Muscularis | RP11-617D20.1 | 0.35 | 0.26 | lasso | 6 | 0.31 | 2.5e-19 | 26.03 | 27.7 | 6.7e-169 | 0.90 | 0.00 | 1.00 | FALSE |
49 | GTEx | Esophagus Muscularis | RP11-360F5.3 | 0.25 | 0.24 | enet | 22 | 0.22 | 1.0e-13 | 3.30 | -5.3 | 1.1e-07 | -0.11 | 1.00 | 0.00 | FALSE |
50 | GTEx | Heart Atrial Appendage | AC021860.1 | 0.48 | 0.07 | lasso | 15 | 0.19 | 8.1e-09 | 26.66 | 26.8 | 2.4e-158 | 0.79 | 0.00 | 1.00 | FALSE |
51 | GTEx | Heart Atrial Appendage | RP11-617D20.1 | 0.29 | 0.14 | lasso | 6 | 0.17 | 3.7e-08 | 26.66 | 26.7 | 3.4e-157 | 0.90 | 0.00 | 1.00 | FALSE |
52 | GTEx | Heart Left Ventricle | AC021860.1 | 0.26 | 0.15 | lasso | 5 | 0.19 | 1.4e-10 | 18.57 | 25.9 | 1.8e-148 | 0.81 | 0.01 | 0.99 | FALSE |
53 | GTEx | Heart Left Ventricle | RP11-617D20.1 | 0.28 | 0.14 | lasso | 5 | 0.14 | 6.8e-08 | 26.60 | 26.8 | 2.3e-158 | 0.95 | 0.00 | 1.00 | FALSE |
54 | GTEx | Liver | RP11-617D20.1 | 0.24 | 0.12 | lasso | 3 | 0.10 | 1.3e-03 | 26.42 | 26.3 | 5.1e-152 | 0.97 | 0.01 | 0.95 | FALSE |
55 | GTEx | Lung | AC021860.1 | 0.19 | 0.07 | enet | 14 | 0.14 | 8.2e-11 | 18.57 | 25.6 | 1.3e-144 | 0.77 | 0.01 | 0.99 | FALSE |
56 | GTEx | Lung | RP11-617D20.1 | 0.19 | 0.14 | enet | 9 | 0.14 | 1.3e-10 | 26.42 | 26.6 | 3.1e-156 | 0.96 | 0.00 | 1.00 | FALSE |
57 | GTEx | Lung | UGDH-AS1 | 0.12 | 0.00 | enet | 23 | 0.02 | 1.3e-02 | 3.12 | 6.5 | 1.1e-10 | -0.06 | 0.04 | 0.79 | FALSE |
58 | GTEx | Muscle Skeletal | AC021860.1 | 0.16 | 0.10 | lasso | 7 | 0.13 | 1.1e-12 | 18.57 | 25.5 | 6.1e-144 | 0.76 | 0.00 | 1.00 | FALSE |
59 | GTEx | Nerve Tibial | AC021860.1 | 0.43 | 0.20 | lasso | 13 | 0.30 | 8.5e-22 | -12.77 | 23.3 | 6.9e-120 | 0.60 | 0.95 | 0.05 | FALSE |
60 | GTEx | Nerve Tibial | FAM114A1 | 0.32 | 0.24 | lasso | 6 | 0.26 | 2.8e-18 | 7.26 | 5.9 | 3.3e-09 | 0.22 | 1.00 | 0.00 | TRUE |
61 | GTEx | Nerve Tibial | RP11-617D20.1 | 0.35 | 0.10 | enet | 81 | 0.20 | 7.0e-14 | 26.33 | 20.1 | 6.8e-90 | 0.56 | 0.02 | 0.98 | FALSE |
62 | GTEx | Pancreas | AC021860.1 | 0.41 | 0.33 | lasso | 6 | 0.44 | 5.0e-20 | 18.57 | 23.9 | 9.8e-126 | 0.64 | 0.20 | 0.80 | FALSE |
63 | GTEx | Pancreas | RP11-617D20.1 | 0.34 | 0.27 | lasso | 6 | 0.33 | 1.8e-14 | 18.57 | 26.2 | 2.0e-151 | 0.85 | 0.00 | 1.00 | TRUE |
64 | GTEx | Pituitary | AC021860.1 | 0.62 | 0.15 | lasso | 5 | 0.21 | 6.8e-06 | -12.79 | 16.2 | 5.4e-59 | 0.31 | 0.74 | 0.12 | FALSE |
65 | GTEx | Pituitary | RP11-617D20.1 | 0.42 | 0.08 | lasso | 4 | 0.08 | 6.1e-03 | -12.77 | 13.7 | 5.5e-43 | 0.22 | 0.31 | 0.19 | FALSE |
66 | GTEx | Prostate | AC021860.1 | 0.28 | 0.15 | enet | 29 | 0.28 | 8.1e-08 | 18.57 | 19.2 | 4.8e-82 | 0.53 | 0.03 | 0.90 | FALSE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | KLHL5 | 0.21 | 0.01 | enet | 52 | 0.04 | 2.2e-03 | 0.36 | 6.3 | 3.1e-10 | 0.06 | 0.10 | 0.05 | TRUE |
68 | GTEx | Skin Not Sun Exposed Suprapubic | AC021860.1 | 0.43 | 0.32 | lasso | 8 | 0.35 | 4.0e-20 | 26.42 | 27.9 | 4.8e-171 | 0.92 | 0.03 | 0.97 | FALSE |
69 | GTEx | Skin Not Sun Exposed Suprapubic | FAM114A1 | 0.23 | 0.17 | enet | 14 | 0.13 | 1.0e-07 | 7.26 | 9.6 | 7.9e-22 | 0.23 | 1.00 | 0.00 | FALSE |
70 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-617D20.1 | 0.23 | 0.13 | lasso | 3 | 0.13 | 1.7e-07 | 26.42 | 26.4 | 4.4e-153 | 0.97 | 0.01 | 0.99 | FALSE |
71 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-360F5.3 | 0.09 | 0.01 | enet | 28 | 0.03 | 5.2e-03 | -4.50 | -5.7 | 1.0e-08 | -0.20 | 0.19 | 0.24 | FALSE |
72 | GTEx | Skin Sun Exposed Lower leg | KLHL5 | 0.09 | 0.03 | enet | 16 | 0.05 | 4.6e-05 | 7.88 | 7.1 | 1.3e-12 | 0.00 | 0.85 | 0.00 | FALSE |
73 | GTEx | Skin Sun Exposed Lower leg | TLR6 | 0.17 | 0.12 | lasso | 7 | 0.10 | 1.6e-08 | 7.98 | 6.8 | 9.5e-12 | 0.17 | 1.00 | 0.00 | FALSE |
74 | GTEx | Skin Sun Exposed Lower leg | AC021860.1 | 0.31 | 0.22 | lasso | 5 | 0.24 | 5.2e-20 | 26.33 | 27.8 | 2.1e-170 | 0.97 | 0.01 | 0.99 | TRUE |
75 | GTEx | Skin Sun Exposed Lower leg | FAM114A1 | 0.23 | 0.24 | lasso | 3 | 0.24 | 1.3e-19 | 7.26 | 7.4 | 1.9e-13 | 0.23 | 1.00 | 0.00 | FALSE |
76 | GTEx | Skin Sun Exposed Lower leg | RP11-617D20.1 | 0.20 | 0.10 | lasso | 4 | 0.11 | 3.2e-09 | 26.42 | 27.1 | 3.9e-162 | 0.94 | 0.01 | 0.99 | FALSE |
77 | GTEx | Small Intestine Terminal Ileum | AC021860.1 | 0.38 | 0.17 | lasso | 7 | 0.15 | 3.3e-04 | 26.42 | 24.1 | 5.6e-128 | 0.91 | 0.01 | 0.95 | FALSE |
78 | GTEx | Spleen | FAM114A1 | 0.68 | 0.08 | enet | 65 | 0.16 | 6.8e-05 | 2.64 | 6.7 | 2.5e-11 | 0.29 | 0.14 | 0.12 | FALSE |
79 | GTEx | Stomach | AC021860.1 | 0.37 | 0.14 | enet | 27 | 0.18 | 5.9e-09 | 26.66 | 22.2 | 3.2e-109 | 0.79 | 0.00 | 1.00 | FALSE |
80 | GTEx | Stomach | RP11-617D20.1 | 0.32 | 0.23 | enet | 13 | 0.20 | 6.5e-10 | 26.66 | 27.3 | 4.6e-164 | 0.97 | 0.00 | 1.00 | FALSE |
81 | GTEx | Testis | AC021860.1 | 0.23 | 0.16 | lasso | 5 | 0.23 | 1.3e-10 | 26.35 | 27.2 | 1.2e-162 | 0.83 | 0.01 | 0.99 | FALSE |
82 | GTEx | Testis | RP11-617D20.1 | 0.28 | 0.16 | lasso | 5 | 0.18 | 1.9e-08 | 26.35 | 26.6 | 1.5e-155 | 0.89 | 0.03 | 0.97 | FALSE |
83 | GTEx | Thyroid | AC021860.1 | 0.30 | 0.22 | lasso | 4 | 0.30 | 5.4e-23 | -12.79 | 23.7 | 1.0e-123 | 0.64 | 0.88 | 0.12 | FALSE |
84 | GTEx | Thyroid | RP11-617D20.1 | 0.31 | 0.22 | enet | 20 | 0.29 | 3.5e-22 | 26.66 | 27.1 | 2.8e-161 | 0.81 | 0.00 | 1.00 | FALSE |
85 | GTEx | Thyroid | RP11-360F5.3 | 0.16 | 0.18 | enet | 32 | 0.17 | 7.5e-13 | 3.26 | -7.2 | 7.7e-13 | -0.12 | 1.00 | 0.00 | FALSE |
86 | GTEx | Vagina | AC021860.1 | 0.42 | 0.04 | lasso | 12 | 0.07 | 1.2e-02 | 26.66 | 22.4 | 8.4e-111 | 0.87 | 0.01 | 0.88 | FALSE |
87 | GTEx | Vagina | RP11-617D20.1 | 0.31 | 0.01 | lasso | 8 | 0.02 | 1.4e-01 | 26.03 | 23.1 | 5.6e-118 | 0.84 | 0.02 | 0.72 | FALSE |
88 | GTEx | Whole Blood | AC021860.1 | 0.14 | 0.07 | lasso | 7 | 0.10 | 2.5e-09 | 26.42 | 26.6 | 2.4e-155 | 0.87 | 0.00 | 1.00 | FALSE |
89 | GTEx | Whole Blood | RP11-617D20.1 | 0.14 | 0.06 | lasso | 3 | 0.05 | 4.2e-05 | -9.73 | 16.3 | 5.2e-60 | 0.62 | 0.02 | 0.97 | FALSE |
90 | METSIM | Adipose | AC021860.1 | 0.18 | 0.07 | bslmm | 596 | 0.12 | 4.0e-17 | 26.03 | 23.5 | 4.5e-122 | 0.79 | 0.01 | 0.99 | FALSE |
91 | METSIM | Adipose | FAM114A1 | 0.08 | 0.07 | lasso | 4 | 0.07 | 2.1e-10 | 6.02 | 6.9 | 4.3e-12 | 0.21 | 1.00 | 0.00 | TRUE |
92 | METSIM | Adipose | KLHL5 | 0.16 | 0.10 | blup | 492 | 0.12 | 2.7e-17 | 3.47 | -5.3 | 1.1e-07 | -0.22 | 1.00 | 0.00 | TRUE |
93 | METSIM | Adipose | TMEM156 | 0.04 | 0.05 | lasso | 1 | 0.04 | 2.8e-07 | 8.79 | 8.8 | 1.5e-18 | -0.04 | 0.99 | 0.00 | FALSE |
94 | NTR | Blood | KLHL5 | 0.06 | 0.01 | enet | 26 | 0.04 | 3.1e-12 | -8.80 | 8.1 | 5.9e-16 | 0.20 | 0.90 | 0.01 | FALSE |
95 | NTR | Blood | TLR1 | 0.03 | 0.00 | bslmm | 520 | 0.01 | 3.0e-03 | 2.50 | 7.1 | 1.0e-12 | 0.25 | 0.11 | 0.06 | FALSE |
96 | NTR | Blood | TMEM156 | 0.02 | 0.01 | lasso | 2 | 0.01 | 3.7e-05 | 8.79 | 8.1 | 5.1e-16 | -0.02 | 0.56 | 0.01 | FALSE |
97 | ROSMAP | Brain Pre-frontal Cortex | TMEM156 | 0.21 | 0.16 | enet | 17 | 0.16 | 2.6e-20 | 8.80 | -7.3 | 2.2e-13 | 0.05 | 1.00 | 0.00 | FALSE |
98 | ROSMAP | Brain Pre-frontal Cortex | TLR10 | 0.08 | 0.01 | blup | 517 | 0.03 | 3.4e-05 | 1.16 | -10.7 | 1.1e-26 | -0.16 | 0.77 | 0.03 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | AC021860.1 | 0.30 | 0.24 | lasso | 6 | 0.26 | 1.0e-33 | -12.77 | 18.8 | 1.8e-78 | 0.42 | 1.00 | 0.00 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | FAM114A1 | 0.09 | 0.05 | lasso | 7 | 0.05 | 2.8e-07 | 6.76 | 7.8 | 4.9e-15 | 0.23 | 1.00 | 0.00 | FALSE |
101 | ROSMAP | Brain Pre-frontal Cortex | RP11-617D20.1 | 0.14 | 0.08 | enet | 18 | 0.13 | 6.8e-16 | 26.66 | 26.7 | 1.5e-156 | 0.79 | 0.00 | 1.00 | FALSE |
102 | YFS | Blood | TMEM156 | 0.09 | 0.03 | enet | 28 | 0.04 | 3.8e-14 | 8.80 | 9.3 | 9.5e-21 | 0.06 | 1.00 | 0.00 | FALSE |
103 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FLJ13197 | 0.04 | 0.02 | blup | 80 | 0.03 | 3.2e-07 | 26.03 | 25.3 | 7.7e-141 | 0.82 | 0.01 | 0.99 | FALSE |
104 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TMEM156 | 0.02 | 0.04 | lasso | 2 | 0.03 | 1.8e-06 | 8.80 | 8.8 | 1.1e-18 | -0.04 | 0.00 | 1.00 | FALSE |
105 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | FLJ13197 | 0.14 | 0.00 | blup | 81 | 0.04 | 6.7e-03 | -1.87 | 6.4 | 2.1e-10 | 0.18 | 0.02 | 0.05 | FALSE |
106 | The Cancer Genome Atlas | Colon Adenocarcinoma | FLJ13197 | 0.12 | 0.00 | blup | 85 | 0.05 | 9.1e-04 | 26.41 | 18.7 | 4.5e-78 | 0.76 | 0.01 | 0.90 | FALSE |
107 | The Cancer Genome Atlas | Colon Adenocarcinoma | TLR6 | 0.16 | 0.03 | enet | 8 | 0.06 | 1.5e-04 | -8.80 | 7.5 | 5.3e-14 | 0.17 | 0.02 | 0.71 | FALSE |
108 | The Cancer Genome Atlas | Colon Adenocarcinoma | TMEM156 | 0.17 | 0.06 | enet | 20 | 0.09 | 7.8e-06 | 8.80 | 10.1 | 7.7e-24 | 0.08 | 0.01 | 0.99 | TRUE |
109 | The Cancer Genome Atlas | Esophageal Carcinoma | FLJ13197 | 0.16 | 0.04 | lasso | 2 | 0.02 | 8.9e-02 | 18.57 | 18.5 | 1.5e-76 | 0.50 | 0.02 | 0.24 | FALSE |
110 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FLJ13197 | 0.06 | 0.05 | lasso | 6 | 0.04 | 8.5e-06 | 26.60 | 26.7 | 8.2e-157 | 0.98 | 0.01 | 0.99 | FALSE |
111 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | KLHL5 | 0.09 | 0.09 | lasso | 3 | 0.07 | 2.4e-08 | 7.91 | 8.1 | 4.9e-16 | 0.02 | 0.75 | 0.25 | FALSE |
112 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | TMEM156 | 0.07 | 0.04 | blup | 96 | 0.04 | 1.2e-05 | 7.82 | 8.1 | 6.4e-16 | -0.01 | 0.01 | 0.99 | FALSE |
113 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FLJ13197 | 0.11 | 0.07 | blup | 85 | 0.10 | 3.4e-11 | 26.42 | 22.1 | 2.7e-108 | 0.76 | 0.00 | 1.00 | FALSE |
114 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TLR6 | 0.04 | 0.04 | lasso | 2 | 0.04 | 6.6e-05 | 8.39 | 8.4 | 3.9e-17 | 0.17 | 0.28 | 0.33 | TRUE |
115 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FLJ13197 | 0.08 | 0.05 | blup | 85 | 0.03 | 6.4e-03 | 26.03 | 22.6 | 5.2e-113 | 0.83 | 0.02 | 0.94 | FALSE |
116 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | TMEM156 | 0.07 | 0.02 | blup | 97 | 0.04 | 1.4e-03 | 7.88 | 7.5 | 5.1e-14 | 0.10 | 0.02 | 0.10 | FALSE |
117 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FLJ13197 | 0.06 | 0.04 | enet | 9 | 0.06 | 1.3e-07 | 18.57 | 23.3 | 3.1e-120 | 0.74 | 0.03 | 0.96 | FALSE |
118 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TMEM156 | 0.11 | 0.14 | lasso | 2 | 0.12 | 4.8e-14 | 8.80 | 8.8 | 1.0e-18 | -0.03 | 0.00 | 1.00 | FALSE |
119 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FLJ13197 | 0.11 | 0.08 | lasso | 6 | 0.09 | 7.3e-05 | 26.42 | 26.2 | 9.2e-151 | 0.94 | 0.01 | 0.98 | FALSE |
120 | The Cancer Genome Atlas | Lung Adenocarcinoma | FLJ13197 | 0.11 | 0.07 | blup | 85 | 0.08 | 7.0e-10 | 26.42 | 20.9 | 9.6e-97 | 0.78 | 0.02 | 0.98 | FALSE |
121 | The Cancer Genome Atlas | Lung Adenocarcinoma | TMEM156 | 0.05 | 0.03 | blup | 96 | 0.02 | 9.6e-04 | 8.80 | 5.8 | 6.1e-09 | -0.08 | 0.00 | 0.99 | FALSE |
122 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FLJ13197 | 0.08 | 0.04 | enet | 11 | 0.06 | 1.7e-07 | 26.42 | 21.1 | 4.7e-99 | 0.78 | 0.08 | 0.92 | FALSE |
123 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | KLHL5 | 0.07 | 0.03 | blup | 67 | 0.05 | 5.7e-06 | 7.42 | 6.8 | 1.0e-11 | -0.02 | 0.51 | 0.44 | FALSE |
124 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TMEM156 | 0.07 | 0.04 | blup | 96 | 0.04 | 4.3e-05 | 8.80 | 6.7 | 2.7e-11 | -0.06 | 0.01 | 0.99 | TRUE |
125 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | FLJ13197 | 0.06 | 0.00 | blup | 81 | 0.01 | 3.4e-02 | 26.60 | 24.1 | 8.1e-129 | 0.80 | 0.01 | 0.81 | FALSE |
126 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FLJ13197 | 0.13 | 0.07 | blup | 81 | 0.08 | 2.7e-04 | 18.57 | 20.5 | 1.3e-93 | 0.66 | 0.02 | 0.82 | TRUE |
127 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | TLR6 | 0.10 | 0.13 | lasso | 1 | 0.10 | 4.4e-05 | 7.98 | 8.0 | 1.5e-15 | 0.18 | 0.17 | 0.55 | FALSE |
128 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FLJ13197 | 0.20 | 0.10 | blup | 81 | 0.14 | 4.2e-14 | 26.66 | 23.4 | 3.5e-121 | 0.84 | 0.00 | 1.00 | FALSE |
129 | The Cancer Genome Atlas | Prostate Adenocarcinoma | KLHL5 | 0.03 | 0.02 | blup | 67 | 0.02 | 1.5e-03 | -4.64 | 5.5 | 3.6e-08 | 0.02 | 0.07 | 0.23 | FALSE |
130 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TLR6 | 0.07 | 0.02 | blup | 65 | 0.01 | 4.7e-02 | -9.16 | 6.6 | 4.9e-11 | 0.08 | 0.01 | 0.89 | FALSE |
131 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FLJ13197 | 0.08 | 0.02 | enet | 9 | 0.04 | 1.7e-03 | 11.84 | 20.5 | 1.5e-93 | 0.74 | 0.01 | 0.80 | FALSE |
132 | The Cancer Genome Atlas | Stomach Adenocarcinoma | TMEM156 | 0.09 | 0.02 | blup | 96 | 0.04 | 9.7e-04 | -4.50 | 6.8 | 1.1e-11 | -0.01 | 0.05 | 0.89 | FALSE |
133 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | FLJ13197 | 0.22 | 0.05 | blup | 85 | 0.10 | 2.4e-04 | -9.67 | 9.7 | 2.5e-22 | 0.15 | 0.04 | 0.08 | FALSE |
134 | The Cancer Genome Atlas | Thyroid Carcinoma | FLJ13197 | 0.16 | 0.08 | blup | 82 | 0.13 | 7.1e-13 | 18.57 | 20.9 | 7.3e-97 | 0.60 | 0.04 | 0.96 | FALSE |
135 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | FLJ13197 | 0.20 | 0.01 | blup | 85 | 0.09 | 1.4e-03 | 26.42 | 21.3 | 1.2e-100 | 0.74 | 0.01 | 0.83 | FALSE |
136 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | TLR1 | 0.13 | 0.13 | enet | 3 | 0.08 | 2.6e-03 | 5.83 | -6.4 | 1.8e-10 | -0.10 | 0.02 | 0.68 | FALSE |