Best TWAS P=1.06e-44 · Best GWAS P=4.97e-47 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | FADS1 | 0.14 | 0.16 | lasso | 2 | 0.16 | 7.2e-19 | 8.24 | -8.2 | 1.6e-16 | 0.02 | 0.01 | 0.99 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FEN1 | 0.07 | 0.06 | lasso | 4 | 0.06 | 1.1e-07 | 8.24 | 8.3 | 1.1e-16 | -0.01 | 0.01 | 0.99 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | MS4A14 | 0.11 | 0.08 | enet | 37 | 0.09 | 3.7e-11 | 4.62 | -6.1 | 8.5e-10 | 0.10 | 1.00 | 0.00 | FALSE |
4 | GTEx | Adipose Subcutaneous | ROM1 | 0.25 | 0.17 | lasso | 3 | 0.18 | 1.5e-14 | -5.73 | 5.9 | 4.3e-09 | 0.09 | 0.98 | 0.02 | FALSE |
5 | GTEx | Adipose Subcutaneous | MS4A14 | 0.10 | 0.13 | lasso | 6 | 0.12 | 2.6e-10 | 5.55 | -5.6 | 2.7e-08 | 0.07 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Visceral Omentum | ROM1 | 0.29 | 0.16 | lasso | 8 | 0.23 | 3.7e-12 | -5.94 | 6.1 | 1.1e-09 | 0.11 | 0.97 | 0.03 | FALSE |
7 | GTEx | Adipose Visceral Omentum | MS4A14 | 0.17 | 0.15 | lasso | 2 | 0.15 | 4.8e-08 | 5.53 | -5.4 | 6.3e-08 | 0.09 | 0.99 | 0.00 | FALSE |
8 | GTEx | Adrenal Gland | MS4A14 | 0.25 | 0.20 | lasso | 4 | 0.20 | 1.4e-07 | 6.04 | -6.0 | 2.5e-09 | 0.10 | 1.00 | 0.00 | FALSE |
9 | GTEx | Artery Aorta | FADS2 | 0.18 | 0.17 | lasso | 3 | 0.14 | 3.2e-08 | 4.11 | 5.3 | 1.3e-07 | 0.03 | 0.19 | 0.80 | FALSE |
10 | GTEx | Artery Aorta | ROM1 | 0.18 | 0.17 | lasso | 7 | 0.16 | 3.3e-09 | -6.14 | 6.2 | 6.2e-10 | 0.10 | 0.96 | 0.04 | FALSE |
11 | GTEx | Artery Aorta | MS4A7 | 0.15 | 0.02 | enet | 28 | 0.04 | 3.6e-03 | 4.62 | -7.0 | 3.5e-12 | 0.20 | 0.71 | 0.02 | FALSE |
12 | GTEx | Artery Aorta | MS4A14 | 0.14 | 0.17 | lasso | 5 | 0.16 | 4.7e-09 | 5.55 | -5.7 | 1.3e-08 | 0.07 | 1.00 | 0.00 | FALSE |
13 | GTEx | Artery Coronary | MS4A14 | 0.19 | 0.12 | lasso | 2 | 0.11 | 1.4e-04 | 5.85 | -5.8 | 4.9e-09 | 0.08 | 0.28 | 0.04 | FALSE |
14 | GTEx | Artery Tibial | FADS2 | 0.08 | 0.02 | lasso | 4 | 0.02 | 6.9e-03 | 8.27 | 6.6 | 3.3e-11 | 0.02 | 0.01 | 0.97 | TRUE |
15 | GTEx | Artery Tibial | TMEM258 | 0.08 | 0.05 | lasso | 5 | 0.02 | 1.1e-02 | 8.23 | 8.4 | 5.1e-17 | -0.02 | 0.01 | 0.98 | FALSE |
16 | GTEx | Artery Tibial | ROM1 | 0.14 | 0.05 | lasso | 6 | 0.03 | 2.5e-03 | -6.06 | 6.3 | 2.7e-10 | 0.10 | 0.63 | 0.03 | FALSE |
17 | GTEx | Brain Cerebellum | FADS1 | 0.35 | 0.24 | enet | 16 | 0.30 | 2.1e-09 | 7.93 | -7.6 | 2.2e-14 | 0.03 | 0.02 | 0.98 | TRUE |
18 | GTEx | Brain Cerebellum | FADS3 | 0.26 | 0.18 | lasso | 4 | 0.14 | 5.7e-05 | 7.91 | -8.1 | 4.4e-16 | 0.05 | 0.03 | 0.85 | FALSE |
19 | GTEx | Brain Putamen basal ganglia | FADS1 | 0.29 | 0.21 | enet | 30 | 0.16 | 1.4e-04 | 8.24 | -7.4 | 1.3e-13 | 0.00 | 0.02 | 0.92 | TRUE |
20 | GTEx | Breast Mammary Tissue | ROM1 | 0.10 | 0.09 | lasso | 5 | 0.06 | 5.4e-04 | -6.14 | 6.2 | 6.8e-10 | 0.10 | 0.78 | 0.05 | FALSE |
21 | GTEx | Breast Mammary Tissue (Female) | TMEM258 | 0.20 | 0.02 | lasso | 7 | 0.00 | 2.3e-01 | 5.29 | 6.2 | 6.0e-10 | 0.04 | 0.04 | 0.51 | FALSE |
22 | GTEx | Breast Mammary Tissue (Female) | ROM1 | 0.16 | 0.02 | lasso | 4 | 0.04 | 2.9e-02 | -5.94 | 6.0 | 1.7e-09 | 0.12 | 0.14 | 0.06 | FALSE |
23 | GTEx | Cells EBV-transformed lymphocytes | EML3 | 0.33 | 0.22 | lasso | 8 | 0.21 | 1.6e-07 | -6.34 | -6.2 | 7.1e-10 | -0.11 | 0.89 | 0.05 | FALSE |
24 | GTEx | Cells Transformed fibroblasts | TMEM258 | 0.15 | 0.05 | enet | 15 | 0.07 | 1.1e-05 | 8.27 | 6.2 | 7.4e-10 | 0.03 | 0.01 | 0.99 | TRUE |
25 | GTEx | Cells Transformed fibroblasts | MTA2 | 0.06 | 0.09 | lasso | 1 | 0.07 | 3.0e-06 | -5.59 | -5.6 | 2.2e-08 | -0.07 | 0.84 | 0.03 | FALSE |
26 | GTEx | Cells Transformed fibroblasts | EML3 | 0.19 | 0.16 | lasso | 9 | 0.18 | 7.3e-14 | -5.61 | -6.1 | 1.0e-09 | -0.09 | 0.97 | 0.03 | FALSE |
27 | GTEx | Colon Transverse | FADS2 | 0.18 | 0.11 | lasso | 7 | 0.16 | 8.1e-08 | 4.11 | 7.1 | 1.5e-12 | 0.01 | 0.04 | 0.96 | TRUE |
28 | GTEx | Colon Transverse | MS4A14 | 0.17 | 0.15 | enet | 25 | 0.13 | 9.6e-07 | 4.62 | -6.3 | 3.3e-10 | 0.12 | 0.98 | 0.00 | TRUE |
29 | GTEx | Esophagus Mucosa | MTA2 | 0.29 | 0.34 | lasso | 5 | 0.33 | 6.9e-23 | -6.06 | -6.2 | 7.7e-10 | -0.10 | 0.96 | 0.04 | FALSE |
30 | GTEx | Esophagus Mucosa | FADS1 | 0.11 | 0.00 | lasso | 4 | 0.02 | 1.9e-02 | 7.85 | -6.8 | 1.2e-11 | 0.03 | 0.02 | 0.92 | TRUE |
31 | GTEx | Esophagus Mucosa | EML3 | 0.40 | 0.43 | lasso | 8 | 0.46 | 1.8e-33 | -6.15 | -6.5 | 1.0e-10 | -0.10 | 0.96 | 0.04 | FALSE |
32 | GTEx | Esophagus Mucosa | MS4A14 | 0.14 | 0.11 | lasso | 4 | 0.10 | 1.9e-07 | 5.55 | -5.7 | 1.1e-08 | 0.08 | 0.99 | 0.00 | FALSE |
33 | GTEx | Esophagus Muscularis | FADS2 | 0.32 | 0.30 | lasso | 6 | 0.31 | 3.7e-19 | 4.11 | 5.4 | 8.5e-08 | 0.04 | 0.95 | 0.05 | FALSE |
34 | GTEx | Esophagus Muscularis | MS4A7 | 0.10 | 0.09 | lasso | 3 | 0.07 | 5.2e-05 | 5.55 | -5.4 | 7.2e-08 | 0.06 | 0.56 | 0.03 | FALSE |
35 | GTEx | Esophagus Muscularis | MS4A14 | 0.17 | 0.14 | lasso | 4 | 0.12 | 4.9e-08 | 5.62 | -5.6 | 2.3e-08 | 0.06 | 1.00 | 0.00 | FALSE |
36 | GTEx | Heart Atrial Appendage | MS4A14 | 0.11 | 0.07 | enet | 12 | 0.09 | 1.2e-04 | 4.62 | -5.7 | 1.3e-08 | 0.08 | 0.83 | 0.01 | FALSE |
37 | GTEx | Lung | ROM1 | 0.25 | 0.18 | enet | 13 | 0.20 | 2.2e-15 | -6.06 | 6.1 | 1.2e-09 | 0.10 | 0.96 | 0.04 | FALSE |
38 | GTEx | Lung | EML3 | 0.07 | 0.04 | lasso | 3 | 0.01 | 2.5e-02 | -6.23 | -6.2 | 4.3e-10 | -0.10 | 0.36 | 0.10 | FALSE |
39 | GTEx | Lung | MS4A14 | 0.13 | 0.13 | lasso | 4 | 0.16 | 6.1e-12 | 4.83 | -5.8 | 5.6e-09 | 0.11 | 1.00 | 0.00 | FALSE |
40 | GTEx | Muscle Skeletal | FADS2 | 0.08 | 0.04 | lasso | 2 | 0.03 | 5.9e-04 | 8.14 | 7.1 | 1.1e-12 | 0.02 | 0.02 | 0.98 | TRUE |
41 | GTEx | Muscle Skeletal | MS4A14 | 0.09 | 0.08 | lasso | 5 | 0.06 | 1.7e-06 | 5.62 | -5.3 | 1.1e-07 | 0.06 | 0.99 | 0.00 | TRUE |
42 | GTEx | Nerve Tibial | MS4A6A | 0.08 | 0.02 | lasso | 4 | 0.02 | 1.5e-02 | -12.99 | 10.6 | 3.2e-26 | -0.76 | 0.11 | 0.51 | FALSE |
43 | GTEx | Nerve Tibial | ROM1 | 0.15 | 0.06 | lasso | 7 | 0.06 | 2.9e-05 | -5.67 | 6.3 | 3.7e-10 | 0.08 | 0.87 | 0.03 | FALSE |
44 | GTEx | Nerve Tibial | EML3 | 0.17 | 0.10 | lasso | 4 | 0.09 | 3.9e-07 | -6.23 | -6.1 | 1.2e-09 | -0.10 | 0.94 | 0.04 | FALSE |
45 | GTEx | Nerve Tibial | MS4A14 | 0.26 | 0.25 | lasso | 7 | 0.24 | 1.2e-16 | 5.55 | -7.2 | 5.4e-13 | 0.20 | 1.00 | 0.00 | FALSE |
46 | GTEx | Ovary | ROM1 | 0.25 | 0.00 | lasso | 5 | 0.00 | 3.3e-01 | -5.59 | 5.9 | 3.7e-09 | 0.09 | 0.09 | 0.09 | FALSE |
47 | GTEx | Pancreas | FADS1 | 0.17 | 0.13 | lasso | 6 | 0.12 | 1.2e-05 | 7.91 | -8.0 | 1.8e-15 | 0.04 | 0.03 | 0.97 | FALSE |
48 | GTEx | Pituitary | STX5 | 0.22 | 0.11 | lasso | 3 | 0.11 | 9.7e-04 | -2.91 | 5.4 | 6.5e-08 | 0.09 | 0.06 | 0.38 | FALSE |
49 | GTEx | Skin Not Sun Exposed Suprapubic | EML3 | 0.20 | 0.19 | lasso | 3 | 0.24 | 2.7e-13 | -6.23 | -6.0 | 2.1e-09 | -0.10 | 0.95 | 0.05 | FALSE |
50 | GTEx | Skin Not Sun Exposed Suprapubic | B3GAT3 | 0.18 | 0.11 | lasso | 3 | 0.11 | 9.8e-07 | -4.91 | -5.4 | 7.7e-08 | -0.07 | 0.97 | 0.00 | FALSE |
51 | GTEx | Skin Not Sun Exposed Suprapubic | MS4A14 | 0.08 | 0.05 | lasso | 7 | 0.05 | 7.2e-04 | 5.62 | -5.9 | 4.7e-09 | 0.09 | 0.46 | 0.07 | FALSE |
52 | GTEx | Skin Sun Exposed Lower leg | ROM1 | 0.13 | 0.11 | lasso | 4 | 0.10 | 9.7e-09 | -6.06 | 5.8 | 5.7e-09 | 0.10 | 0.96 | 0.04 | FALSE |
53 | GTEx | Skin Sun Exposed Lower leg | EML3 | 0.32 | 0.25 | enet | 19 | 0.26 | 8.0e-22 | -6.23 | -5.8 | 6.1e-09 | -0.12 | 0.94 | 0.06 | FALSE |
54 | GTEx | Skin Sun Exposed Lower leg | MS4A7 | 0.07 | 0.05 | lasso | 3 | 0.05 | 6.5e-05 | 4.83 | -6.0 | 2.7e-09 | 0.14 | 0.53 | 0.02 | FALSE |
55 | GTEx | Skin Sun Exposed Lower leg | MS4A14 | 0.08 | 0.05 | lasso | 3 | 0.06 | 2.0e-05 | 6.08 | -6.0 | 2.0e-09 | 0.10 | 0.99 | 0.00 | FALSE |
56 | GTEx | Small Intestine Terminal Ileum | MS4A14 | 0.29 | 0.24 | enet | 25 | 0.18 | 7.2e-05 | 4.64 | -7.4 | 1.9e-13 | 0.16 | 0.40 | 0.05 | TRUE |
57 | GTEx | Spleen | FADS2 | 0.30 | 0.27 | lasso | 3 | 0.27 | 1.6e-07 | 4.11 | 5.4 | 5.6e-08 | 0.03 | 0.05 | 0.94 | FALSE |
58 | GTEx | Spleen | MTA2 | 0.26 | 0.07 | enet | 19 | 0.07 | 8.7e-03 | -5.94 | -5.4 | 5.3e-08 | -0.08 | 0.20 | 0.08 | FALSE |
59 | GTEx | Spleen | MS4A14 | 0.23 | 0.26 | lasso | 3 | 0.27 | 9.8e-08 | 5.55 | -6.0 | 2.3e-09 | 0.08 | 0.82 | 0.01 | FALSE |
60 | GTEx | Stomach | EML3 | 0.11 | 0.04 | enet | 5 | 0.03 | 2.1e-02 | -5.66 | -5.7 | 9.7e-09 | -0.09 | 0.14 | 0.08 | FALSE |
61 | GTEx | Stomach | MS4A14 | 0.25 | 0.17 | lasso | 3 | 0.18 | 7.2e-09 | 5.55 | -6.1 | 9.4e-10 | 0.09 | 1.00 | 0.00 | FALSE |
62 | GTEx | Testis | EML3 | 0.27 | 0.22 | enet | 15 | 0.29 | 2.7e-13 | -6.06 | -6.0 | 2.1e-09 | -0.10 | 0.97 | 0.03 | FALSE |
63 | GTEx | Testis | MS4A14 | 0.44 | 0.45 | lasso | 8 | 0.44 | 1.9e-21 | 5.85 | -5.7 | 9.3e-09 | 0.08 | 1.00 | 0.00 | FALSE |
64 | GTEx | Thyroid | ROM1 | 0.17 | 0.16 | lasso | 8 | 0.16 | 3.6e-12 | -6.18 | 6.1 | 9.3e-10 | 0.10 | 0.95 | 0.05 | FALSE |
65 | GTEx | Thyroid | EML3 | 0.10 | 0.11 | lasso | 4 | 0.10 | 5.9e-08 | -6.23 | -6.2 | 5.7e-10 | -0.10 | 0.93 | 0.06 | FALSE |
66 | GTEx | Thyroid | B3GAT3 | 0.18 | 0.09 | lasso | 5 | 0.12 | 1.4e-09 | -4.91 | -5.7 | 1.0e-08 | -0.07 | 1.00 | 0.00 | FALSE |
67 | GTEx | Thyroid | MS4A14 | 0.10 | 0.10 | enet | 13 | 0.14 | 1.1e-10 | 5.55 | -5.9 | 3.5e-09 | 0.10 | 1.00 | 0.00 | FALSE |
68 | GTEx | Uterus | PPP1R32 | 0.66 | -0.01 | lasso | 13 | 0.14 | 8.8e-04 | -0.41 | 6.1 | 1.1e-09 | -0.01 | 0.03 | 0.46 | TRUE |
69 | GTEx | Whole Blood | MS4A6A | 0.05 | 0.03 | lasso | 5 | 0.03 | 6.1e-04 | -12.94 | 13.0 | 2.2e-38 | -0.90 | 0.15 | 0.82 | FALSE |
70 | GTEx | Whole Blood | EML3 | 0.17 | 0.09 | lasso | 7 | 0.08 | 6.3e-08 | -6.14 | -6.2 | 6.4e-10 | -0.10 | 0.96 | 0.04 | FALSE |
71 | GTEx | Whole Blood | MS4A14 | 0.08 | 0.01 | lasso | 4 | 0.02 | 2.9e-03 | 4.36 | -6.7 | 1.7e-11 | 0.16 | 0.52 | 0.02 | FALSE |
72 | GTEx | Whole Blood | SDHAF2 | 0.11 | 0.05 | enet | 43 | 0.05 | 2.7e-05 | 4.28 | 5.5 | 3.2e-08 | 0.00 | 0.85 | 0.01 | TRUE |
73 | METSIM | Adipose | B3GAT3 | 0.08 | 0.06 | enet | 16 | 0.07 | 5.4e-11 | -5.38 | -5.7 | 1.6e-08 | -0.08 | 1.00 | 0.00 | FALSE |
74 | METSIM | Adipose | EEF1G | 0.08 | 0.05 | bslmm | 375 | 0.06 | 4.5e-09 | -5.67 | 8.1 | 7.6e-16 | 0.08 | 0.97 | 0.03 | TRUE |
75 | METSIM | Adipose | EML3 | 0.15 | 0.14 | bslmm | 376 | 0.14 | 1.9e-20 | -6.16 | -5.9 | 3.4e-09 | -0.10 | 0.96 | 0.04 | FALSE |
76 | METSIM | Adipose | MS4A14 | 0.21 | 0.28 | lasso | 10 | 0.30 | 1.1e-44 | 4.62 | -5.5 | 4.8e-08 | 0.09 | 1.00 | 0.00 | FALSE |
77 | METSIM | Adipose | MS4A4A | 0.04 | 0.04 | blup | 402 | 0.05 | 7.2e-08 | 9.26 | 9.6 | 1.1e-21 | -0.72 | 0.03 | 0.97 | FALSE |
78 | METSIM | Adipose | ROM1 | 0.05 | 0.02 | enet | 17 | 0.02 | 9.9e-05 | -6.06 | 5.8 | 8.5e-09 | 0.11 | 0.89 | 0.04 | FALSE |
79 | METSIM | Adipose | TMEM258 | 0.04 | 0.00 | bslmm | 407 | 0.01 | 4.1e-02 | 7.91 | 6.8 | 8.5e-12 | 0.00 | 0.02 | 0.88 | TRUE |
80 | NTR | Blood | C11orf10 | 0.06 | 0.08 | bslmm | 399 | 0.08 | 1.3e-24 | 8.27 | 8.1 | 4.4e-16 | 0.00 | 0.01 | 0.99 | TRUE |
81 | NTR | Blood | MS4A6A | 0.03 | 0.02 | lasso | 6 | 0.02 | 5.4e-07 | -11.00 | 12.3 | 1.3e-34 | -0.89 | 0.04 | 0.96 | FALSE |
82 | NTR | Blood | MS4A7 | 0.05 | 0.05 | lasso | 9 | 0.05 | 1.2e-14 | 4.83 | 5.6 | 1.9e-08 | -0.11 | 1.00 | 0.00 | FALSE |
83 | NTR | Blood | TCN1 | 0.03 | 0.02 | blup | 373 | 0.02 | 6.2e-06 | 5.82 | 5.4 | 7.9e-08 | -0.37 | 0.96 | 0.02 | TRUE |
84 | ROSMAP | Brain Pre-frontal Cortex | MS4A4A | 0.06 | 0.03 | blup | 423 | 0.04 | 1.9e-05 | 6.56 | 7.2 | 6.8e-13 | -0.46 | 0.98 | 0.01 | TRUE |
85 | ROSMAP | Brain Pre-frontal Cortex | TMEM258 | 0.14 | 0.16 | lasso | 4 | 0.15 | 4.7e-19 | 8.27 | 8.4 | 5.1e-17 | 0.00 | 0.01 | 0.99 | FALSE |
86 | ROSMAP | Brain Pre-frontal Cortex | FADS1 | 0.08 | 0.08 | enet | 10 | 0.09 | 1.5e-11 | 8.06 | -8.4 | 3.4e-17 | 0.04 | 0.02 | 0.98 | TRUE |
87 | ROSMAP | Brain Pre-frontal Cortex | MS4A14 | 0.18 | 0.14 | blup | 460 | 0.17 | 1.6e-21 | 5.55 | -5.4 | 8.0e-08 | 0.10 | 1.00 | 0.00 | TRUE |
88 | YFS | Blood | BSCL2 | 0.34 | 0.10 | enet | 33 | 0.15 | 1.2e-46 | 3.36 | 5.3 | 1.2e-07 | 0.01 | 1.00 | 0.00 | FALSE |
89 | YFS | Blood | EEF1G | 0.30 | 0.45 | lasso | 6 | 0.45 | 3.6e-166 | -6.14 | 6.1 | 1.3e-09 | 0.10 | 0.96 | 0.04 | FALSE |
90 | YFS | Blood | EML3 | 0.20 | 0.31 | lasso | 12 | 0.33 | 1.3e-110 | -5.67 | -6.1 | 9.3e-10 | -0.10 | 0.98 | 0.02 | FALSE |
91 | YFS | Blood | FADS1 | 0.11 | 0.08 | lasso | 8 | 0.09 | 6.1e-29 | 4.11 | 6.7 | 2.7e-11 | 0.01 | 1.00 | 0.00 | TRUE |
92 | YFS | Blood | INTS5 | 0.09 | 0.12 | lasso | 4 | 0.12 | 1.9e-38 | -4.91 | -5.5 | 4.6e-08 | -0.08 | 1.00 | 0.00 | FALSE |
93 | YFS | Blood | MS4A14 | 0.15 | 0.26 | lasso | 12 | 0.26 | 4.9e-85 | 6.21 | -6.2 | 4.2e-10 | 0.11 | 1.00 | 0.00 | FALSE |
94 | YFS | Blood | MS4A6A | 0.13 | 0.10 | enet | 33 | 0.11 | 2.5e-35 | -12.79 | 14.0 | 1.1e-44 | -0.89 | 0.37 | 0.63 | TRUE |
95 | YFS | Blood | MS4A7 | 0.05 | 0.02 | blup | 419 | 0.03 | 1.6e-09 | 5.85 | 6.4 | 1.3e-10 | -0.21 | 1.00 | 0.00 | FALSE |
96 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | EEF1G | 0.04 | 0.05 | lasso | 1 | 0.04 | 1.1e-04 | -5.73 | 5.7 | 9.9e-09 | 0.09 | 0.01 | 0.97 | FALSE |
97 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | MS4A14 | 0.17 | 0.21 | lasso | 5 | 0.22 | 4.0e-18 | 5.85 | -6.0 | 1.9e-09 | 0.11 | 0.99 | 0.01 | FALSE |
98 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EEF1G | 0.02 | 0.04 | lasso | 2 | 0.03 | 6.3e-07 | -6.15 | 6.2 | 6.2e-10 | 0.10 | 0.01 | 0.99 | FALSE |
99 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EML3 | 0.02 | 0.02 | lasso | 4 | 0.02 | 2.5e-05 | -5.67 | -5.7 | 1.2e-08 | -0.10 | 0.01 | 0.98 | FALSE |
100 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MS4A14 | 0.08 | 0.16 | enet | 10 | 0.17 | 6.4e-34 | 6.14 | -5.9 | 3.5e-09 | 0.13 | 0.87 | 0.13 | FALSE |
101 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MS4A4A | 0.04 | 0.03 | blup | 79 | 0.04 | 7.2e-08 | 11.27 | 11.7 | 1.5e-31 | -0.68 | 0.41 | 0.59 | FALSE |
102 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ROM1 | 0.01 | 0.02 | enet | 4 | 0.02 | 2.4e-04 | -5.73 | 6.2 | 4.6e-10 | 0.10 | 0.01 | 0.97 | FALSE |
103 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | FADS1 | 0.06 | 0.03 | lasso | 4 | 0.04 | 7.4e-03 | 7.91 | -7.4 | 1.7e-13 | 0.02 | 0.02 | 0.74 | TRUE |
104 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | MS4A14 | 0.26 | 0.32 | enet | 15 | 0.35 | 3.3e-18 | 5.55 | -5.4 | 5.2e-08 | 0.05 | 0.94 | 0.06 | FALSE |
105 | The Cancer Genome Atlas | Colon Adenocarcinoma | EEF1G | 0.07 | 0.11 | lasso | 1 | 0.11 | 9.2e-07 | -6.34 | 6.3 | 2.3e-10 | 0.11 | 0.01 | 0.99 | FALSE |
106 | The Cancer Genome Atlas | Colon Adenocarcinoma | FADS2 | 0.30 | 0.21 | lasso | 2 | 0.22 | 6.7e-13 | 4.11 | 6.0 | 2.3e-09 | 0.03 | 0.45 | 0.55 | FALSE |
107 | The Cancer Genome Atlas | Colon Adenocarcinoma | MS4A14 | 0.17 | 0.16 | lasso | 8 | 0.17 | 6.9e-10 | 5.55 | -5.6 | 2.5e-08 | 0.07 | 0.98 | 0.02 | FALSE |
108 | The Cancer Genome Atlas | Colon Adenocarcinoma | MS4A4A | 0.06 | 0.04 | blup | 79 | 0.05 | 1.1e-03 | 7.22 | 10.1 | 5.8e-24 | -0.67 | 0.21 | 0.55 | TRUE |
109 | The Cancer Genome Atlas | Colon Adenocarcinoma | MS4A7 | 0.14 | 0.01 | blup | 77 | 0.03 | 4.2e-03 | -5.14 | 6.3 | 2.1e-10 | -0.31 | 0.04 | 0.53 | TRUE |
110 | The Cancer Genome Atlas | Esophageal Carcinoma | MS4A14 | 0.22 | 0.20 | lasso | 7 | 0.19 | 1.0e-06 | 4.36 | -6.0 | 2.2e-09 | 0.12 | 0.94 | 0.04 | FALSE |
111 | The Cancer Genome Atlas | Glioblastoma Multiforme | MS4A14 | 0.44 | 0.38 | blup | 86 | 0.42 | 3.6e-14 | 4.36 | -6.4 | 1.2e-10 | 0.12 | 0.96 | 0.04 | FALSE |
112 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | EEF1G | 0.10 | 0.09 | blup | 26 | 0.09 | 9.8e-11 | -6.34 | 5.3 | 9.8e-08 | 0.10 | 0.01 | 0.99 | FALSE |
113 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | EML3 | 0.06 | 0.05 | blup | 27 | 0.06 | 7.6e-07 | -5.33 | -6.4 | 1.6e-10 | -0.11 | 0.04 | 0.95 | FALSE |
114 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FADS2 | 0.05 | 0.04 | lasso | 3 | 0.05 | 1.9e-06 | 4.11 | 5.3 | 1.3e-07 | 0.05 | 0.20 | 0.76 | TRUE |
115 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | MS4A14 | 0.20 | 0.30 | enet | 19 | 0.32 | 2.1e-36 | 4.62 | -5.8 | 5.8e-09 | 0.11 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ROM1 | 0.04 | 0.02 | blup | 22 | 0.02 | 6.2e-03 | -5.59 | 6.5 | 1.1e-10 | 0.09 | 0.01 | 0.83 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | EEF1G | 0.11 | 0.12 | blup | 27 | 0.13 | 5.5e-14 | -6.06 | 6.0 | 2.4e-09 | 0.10 | 0.02 | 0.98 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | EML3 | 0.04 | 0.06 | lasso | 3 | 0.06 | 1.7e-07 | -6.23 | -6.2 | 5.0e-10 | -0.10 | 0.01 | 0.99 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FADS2 | 0.26 | 0.29 | enet | 15 | 0.29 | 2.9e-33 | 4.11 | 5.6 | 1.7e-08 | 0.03 | 1.00 | 0.00 | FALSE |
120 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MS4A14 | 0.26 | 0.39 | lasso | 7 | 0.41 | 1.2e-49 | 6.19 | -6.6 | 5.0e-11 | 0.11 | 0.86 | 0.14 | FALSE |
121 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MS4A2 | 0.05 | 0.03 | lasso | 3 | 0.03 | 4.1e-04 | -13.17 | -12.2 | 5.5e-34 | 0.84 | 0.00 | 0.98 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MS4A4A | 0.05 | 0.07 | lasso | 2 | 0.06 | 4.6e-07 | 9.26 | 9.3 | 1.3e-20 | -0.59 | 0.97 | 0.02 | FALSE |
123 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MS4A7 | 0.02 | 0.00 | blup | 77 | 0.00 | 1.2e-01 | -5.14 | 8.0 | 1.2e-15 | -0.31 | 0.10 | 0.13 | FALSE |
124 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | EEF1G | 0.07 | 0.04 | blup | 28 | 0.07 | 9.8e-05 | -5.59 | 7.2 | 6.1e-13 | 0.09 | 0.02 | 0.94 | FALSE |
125 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | EML3 | 0.06 | 0.09 | lasso | 2 | 0.08 | 1.6e-05 | -5.38 | -5.5 | 4.3e-08 | -0.09 | 0.06 | 0.93 | FALSE |
126 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FADS2 | 0.33 | 0.27 | lasso | 9 | 0.35 | 9.3e-21 | 4.11 | 5.9 | 4.3e-09 | 0.03 | 0.45 | 0.55 | FALSE |
127 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | MS4A14 | 0.20 | 0.19 | blup | 81 | 0.25 | 9.4e-15 | 6.08 | -6.3 | 3.4e-10 | 0.14 | 0.94 | 0.06 | FALSE |
128 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EEF1G | 0.06 | 0.07 | blup | 27 | 0.07 | 8.1e-09 | -6.16 | 5.4 | 7.5e-08 | 0.10 | 0.02 | 0.98 | FALSE |
129 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EML3 | 0.03 | 0.04 | blup | 28 | 0.03 | 7.6e-05 | -5.67 | -5.4 | 5.6e-08 | -0.10 | 0.02 | 0.98 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FADS1 | 0.05 | 0.05 | blup | 53 | 0.04 | 6.8e-05 | 8.14 | -6.6 | 3.3e-11 | -0.03 | 0.02 | 0.98 | TRUE |
131 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MS4A14 | 0.18 | 0.25 | lasso | 5 | 0.28 | 7.1e-32 | 6.19 | -6.2 | 6.6e-10 | 0.10 | 0.88 | 0.12 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MS4A4A | 0.05 | 0.05 | blup | 79 | 0.05 | 1.3e-06 | 7.21 | 6.6 | 5.2e-11 | -0.43 | 0.99 | 0.00 | TRUE |
133 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MS4A7 | 0.05 | 0.00 | blup | 77 | 0.03 | 1.7e-04 | -5.14 | 7.1 | 1.5e-12 | -0.30 | 0.12 | 0.70 | FALSE |
134 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | EEF1G | 0.06 | 0.03 | blup | 27 | 0.04 | 4.5e-03 | -5.38 | 6.9 | 4.5e-12 | 0.09 | 0.02 | 0.69 | FALSE |
135 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FADS1 | 0.20 | 0.01 | blup | 51 | 0.07 | 3.2e-04 | 8.25 | -7.1 | 1.5e-12 | 0.02 | 0.02 | 0.92 | TRUE |
136 | The Cancer Genome Atlas | Lung Adenocarcinoma | EEF1G | 0.06 | 0.08 | lasso | 8 | 0.08 | 5.9e-10 | -6.16 | 6.1 | 1.2e-09 | 0.09 | 0.02 | 0.98 | FALSE |
137 | The Cancer Genome Atlas | Lung Adenocarcinoma | EML3 | 0.03 | 0.03 | blup | 28 | 0.03 | 8.4e-05 | -6.16 | -6.0 | 2.3e-09 | -0.09 | 0.01 | 0.99 | FALSE |
138 | The Cancer Genome Atlas | Lung Adenocarcinoma | MS4A4A | 0.04 | 0.04 | enet | 7 | 0.04 | 1.1e-05 | 6.54 | 6.8 | 1.3e-11 | -0.40 | 0.66 | 0.02 | TRUE |
139 | The Cancer Genome Atlas | Lung Adenocarcinoma | ROM1 | 0.04 | 0.04 | blup | 23 | 0.04 | 9.5e-06 | -6.15 | 6.0 | 2.3e-09 | 0.10 | 0.01 | 0.99 | FALSE |
140 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C11orf83 | 0.07 | 0.01 | blup | 24 | 0.01 | 1.0e-02 | -4.91 | 6.0 | 2.0e-09 | 0.07 | 0.01 | 0.74 | FALSE |
141 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | EEF1G | 0.08 | 0.13 | lasso | 4 | 0.12 | 3.1e-13 | -6.14 | 6.1 | 8.4e-10 | 0.10 | 0.01 | 0.99 | FALSE |
142 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FADS2 | 0.02 | 0.01 | blup | 71 | 0.02 | 1.9e-03 | 8.14 | 7.7 | 1.9e-14 | 0.02 | 0.02 | 0.80 | TRUE |
143 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MS4A14 | 0.21 | 0.35 | lasso | 5 | 0.34 | 8.4e-40 | 5.55 | -5.5 | 3.4e-08 | 0.07 | 1.00 | 0.00 | FALSE |
144 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MS4A4A | 0.03 | 0.02 | blup | 79 | 0.02 | 4.2e-03 | 6.56 | 6.8 | 1.3e-11 | -0.44 | 0.32 | 0.06 | FALSE |
145 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | EML3 | 0.03 | 0.02 | blup | 27 | 0.03 | 3.5e-03 | -5.73 | -6.5 | 8.9e-11 | -0.10 | 0.01 | 0.76 | FALSE |
146 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MS4A14 | 0.18 | 0.24 | blup | 87 | 0.29 | 7.1e-20 | 6.19 | -5.3 | 1.3e-07 | 0.06 | 0.89 | 0.11 | FALSE |
147 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MS4A4A | 0.06 | 0.08 | lasso | 5 | 0.06 | 8.2e-05 | 9.26 | 5.7 | 1.4e-08 | -0.35 | 0.61 | 0.03 | TRUE |
148 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MS4A6A | 0.05 | 0.01 | enet | 10 | 0.03 | 6.6e-03 | 11.34 | 9.6 | 6.4e-22 | -0.56 | 0.03 | 0.21 | FALSE |
149 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | EEF1G | 0.08 | 0.08 | blup | 27 | 0.05 | 3.6e-03 | -6.16 | 5.3 | 1.4e-07 | 0.10 | 0.01 | 0.95 | FALSE |
150 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | MS4A14 | 0.34 | 0.31 | lasso | 8 | 0.30 | 3.2e-13 | 5.55 | -5.5 | 3.0e-08 | 0.09 | 1.00 | 0.00 | FALSE |
151 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | MS4A14 | 0.24 | 0.30 | enet | 12 | 0.36 | 4.2e-15 | 5.55 | -5.7 | 9.3e-09 | 0.08 | 0.98 | 0.02 | TRUE |
152 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C11orf10 | 0.02 | 0.01 | enet | 11 | 0.01 | 1.6e-02 | 8.27 | 5.8 | 5.3e-09 | 0.00 | 0.01 | 0.78 | TRUE |
153 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EEF1G | 0.08 | 0.13 | lasso | 2 | 0.12 | 1.8e-12 | -6.15 | 6.2 | 7.7e-10 | 0.10 | 0.01 | 0.99 | FALSE |
154 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EML3 | 0.09 | 0.14 | lasso | 1 | 0.14 | 3.4e-14 | -5.73 | -5.7 | 9.9e-09 | -0.09 | 0.09 | 0.91 | FALSE |
155 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FADS1 | 0.06 | 0.04 | blup | 53 | 0.03 | 2.0e-04 | 7.93 | -6.5 | 9.1e-11 | 0.08 | 0.05 | 0.62 | TRUE |
156 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MS4A14 | 0.18 | 0.20 | enet | 11 | 0.23 | 1.6e-23 | 6.14 | -6.2 | 6.1e-10 | 0.09 | 0.91 | 0.09 | FALSE |
157 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MS4A2 | 0.04 | 0.02 | lasso | 2 | 0.02 | 1.3e-03 | -11.59 | -11.6 | 3.3e-31 | 0.83 | 0.02 | 0.85 | FALSE |
158 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MS4A4A | 0.07 | 0.03 | blup | 79 | 0.04 | 2.8e-05 | 11.27 | 8.8 | 1.9e-18 | -0.58 | 0.84 | 0.15 | FALSE |
159 | The Cancer Genome Atlas | Rectum Adenocarcinoma | FADS2 | 0.47 | 0.34 | lasso | 5 | 0.30 | 7.9e-08 | 4.11 | 5.3 | 1.4e-07 | 0.02 | 0.04 | 0.94 | FALSE |
160 | The Cancer Genome Atlas | Rectum Adenocarcinoma | MS4A14 | 0.27 | 0.22 | lasso | 6 | 0.22 | 7.9e-06 | 6.14 | -6.0 | 2.0e-09 | 0.10 | 0.86 | 0.09 | FALSE |
161 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ASRGL1 | 0.10 | 0.02 | blup | 74 | 0.07 | 3.9e-05 | -1.38 | 5.4 | 7.3e-08 | -0.01 | 0.17 | 0.04 | TRUE |
162 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FAM111B | 0.13 | 0.00 | enet | 5 | 0.01 | 4.9e-02 | 5.37 | -5.3 | 1.1e-07 | 0.09 | 0.01 | 0.84 | FALSE |
163 | The Cancer Genome Atlas | Soft Tissue Sarcoma | MS4A14 | 0.13 | 0.13 | blup | 85 | 0.12 | 1.5e-07 | 5.85 | -5.2 | 2.5e-07 | 0.06 | 0.94 | 0.04 | FALSE |
164 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ROM1 | 0.06 | 0.05 | blup | 24 | 0.03 | 8.1e-03 | -6.15 | 6.6 | 4.0e-11 | 0.10 | 0.01 | 0.88 | FALSE |
165 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | MS4A14 | 0.26 | 0.17 | lasso | 7 | 0.17 | 2.4e-05 | 6.08 | -6.4 | 1.7e-10 | 0.11 | 0.59 | 0.10 | FALSE |
166 | The Cancer Genome Atlas | Stomach Adenocarcinoma | EEF1G | 0.05 | 0.07 | blup | 27 | 0.07 | 1.7e-05 | -6.34 | 5.5 | 4.0e-08 | 0.10 | 0.01 | 0.99 | FALSE |
167 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FADS2 | 0.15 | 0.05 | blup | 71 | 0.11 | 2.5e-08 | 4.11 | 6.5 | 1.1e-10 | 0.01 | 0.04 | 0.96 | TRUE |
168 | The Cancer Genome Atlas | Stomach Adenocarcinoma | MS4A14 | 0.27 | 0.30 | lasso | 9 | 0.33 | 9.2e-25 | 5.55 | -6.2 | 4.6e-10 | 0.10 | 0.93 | 0.07 | FALSE |
169 | The Cancer Genome Atlas | Stomach Adenocarcinoma | MS4A2 | 0.04 | 0.04 | blup | 55 | 0.04 | 8.2e-04 | -11.60 | -12.3 | 8.8e-35 | 0.85 | 0.03 | 0.91 | FALSE |
170 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ROM1 | 0.05 | 0.08 | lasso | 3 | 0.08 | 3.1e-06 | -6.23 | 6.2 | 4.7e-10 | 0.09 | 0.01 | 0.99 | FALSE |
171 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | MS4A4A | 0.16 | 0.02 | blup | 78 | 0.03 | 2.7e-02 | 11.27 | 11.3 | 9.5e-30 | -0.70 | 0.02 | 0.30 | FALSE |
172 | The Cancer Genome Atlas | Thyroid Carcinoma | C11orf10 | 0.02 | 0.02 | blup | 44 | 0.02 | 1.8e-03 | 8.02 | 8.2 | 2.0e-16 | -0.02 | 0.02 | 0.75 | FALSE |
173 | The Cancer Genome Atlas | Thyroid Carcinoma | DTX4 | 0.03 | 0.01 | blup | 52 | 0.01 | 1.2e-02 | 4.70 | 5.7 | 1.0e-08 | -0.07 | 0.01 | 0.80 | TRUE |
174 | The Cancer Genome Atlas | Thyroid Carcinoma | EEF1G | 0.15 | 0.27 | blup | 27 | 0.28 | 3.6e-27 | -6.08 | 5.6 | 1.8e-08 | 0.11 | 0.02 | 0.98 | FALSE |
175 | The Cancer Genome Atlas | Thyroid Carcinoma | EML3 | 0.11 | 0.10 | blup | 28 | 0.12 | 2.3e-11 | -5.73 | -5.4 | 5.3e-08 | -0.07 | 0.09 | 0.91 | FALSE |
176 | The Cancer Genome Atlas | Thyroid Carcinoma | FADS2 | 0.30 | 0.33 | lasso | 8 | 0.33 | 5.6e-33 | 4.11 | 5.3 | 1.4e-07 | 0.03 | 1.00 | 0.00 | FALSE |
177 | The Cancer Genome Atlas | Thyroid Carcinoma | MS4A14 | 0.23 | 0.38 | lasso | 8 | 0.40 | 1.5e-41 | 6.22 | -6.4 | 1.4e-10 | 0.11 | 0.87 | 0.13 | FALSE |
178 | The Cancer Genome Atlas | Thyroid Carcinoma | ROM1 | 0.03 | 0.02 | blup | 23 | 0.02 | 1.1e-02 | -6.06 | 6.4 | 1.5e-10 | 0.11 | 0.01 | 0.93 | FALSE |
179 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | MS4A14 | 0.35 | 0.21 | lasso | 3 | 0.21 | 2.0e-06 | 5.36 | -5.7 | 9.6e-09 | 0.11 | 0.78 | 0.05 | FALSE |