Best TWAS P=3e-15 · Best GWAS P=7.92e-12 conditioned to 0.00129
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | NDUFA2 | 0.02 | 0.01 | bslmm | 343 | 0.01 | 7.8e-03 | -5.4 | 7.1 | 1.6e-12 | -0.36 | 0.20 | 0.26 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | PCDHA7 | 0.13 | 0.14 | lasso | 8 | 0.14 | 5.1e-17 | -5.4 | -5.8 | 5.5e-09 | 0.27 | 0.30 | 0.70 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | PCDHAC1 | 0.04 | 0.00 | bslmm | 442 | 0.01 | 6.4e-03 | 4.1 | -6.0 | 2.2e-09 | 0.10 | 0.05 | 0.72 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | ZMAT2 | 0.06 | 0.10 | blup | 360 | 0.09 | 1.4e-11 | -6.2 | -6.1 | 1.4e-09 | 0.37 | 0.18 | 0.82 | FALSE |
5 | GTEx | Adipose Subcutaneous | PFDN1 | 0.20 | 0.19 | lasso | 4 | 0.18 | 6.3e-15 | -5.9 | 5.9 | 3.5e-09 | -0.57 | 0.66 | 0.34 | FALSE |
6 | GTEx | Adipose Subcutaneous | IK | 0.16 | 0.07 | lasso | 5 | 0.07 | 2.7e-06 | -6.3 | -5.6 | 1.8e-08 | 0.20 | 0.25 | 0.75 | FALSE |
7 | GTEx | Adipose Visceral Omentum | PFDN1 | 0.13 | 0.10 | lasso | 9 | 0.08 | 3.9e-05 | -5.8 | 5.5 | 3.8e-08 | -0.51 | 0.64 | 0.34 | FALSE |
8 | GTEx | Adipose Visceral Omentum | TMCO6 | 0.06 | 0.01 | enet | 7 | 0.03 | 1.3e-02 | -4.3 | -6.0 | 2.5e-09 | 0.27 | 0.30 | 0.18 | FALSE |
9 | GTEx | Artery Aorta | PFDN1 | 0.20 | 0.15 | lasso | 2 | 0.17 | 1.3e-09 | -5.8 | 6.4 | 1.2e-10 | -0.57 | 0.66 | 0.34 | FALSE |
10 | GTEx | Artery Coronary | PFDN1 | 0.15 | 0.06 | enet | 11 | 0.04 | 1.9e-02 | -5.8 | 6.7 | 2.2e-11 | -0.74 | 0.06 | 0.68 | FALSE |
11 | GTEx | Artery Tibial | PFDN1 | 0.19 | 0.19 | enet | 12 | 0.22 | 9.8e-17 | -5.9 | 5.9 | 3.6e-09 | -0.57 | 0.65 | 0.35 | FALSE |
12 | GTEx | Artery Tibial | TMCO6 | 0.04 | 0.04 | enet | 5 | 0.04 | 4.1e-04 | 4.1 | -5.3 | 1.1e-07 | 0.22 | 0.51 | 0.42 | FALSE |
13 | GTEx | Artery Tibial | IK | 0.06 | 0.04 | enet | 13 | 0.05 | 1.3e-04 | -5.8 | -6.3 | 2.8e-10 | 0.22 | 0.38 | 0.59 | FALSE |
14 | GTEx | Artery Tibial | CYSTM1 | 0.19 | 0.17 | lasso | 9 | 0.14 | 2.8e-11 | -5.8 | 6.1 | 1.2e-09 | -0.58 | 0.70 | 0.30 | FALSE |
15 | GTEx | Artery Tibial | SRA1 | 0.07 | 0.02 | lasso | 10 | 0.02 | 7.8e-03 | -4.6 | -6.6 | 4.2e-11 | 0.42 | 0.14 | 0.43 | FALSE |
16 | GTEx | Brain Caudate basal ganglia | CYSTM1 | 0.22 | 0.15 | lasso | 11 | 0.12 | 3.4e-04 | -5.9 | 5.3 | 1.0e-07 | -0.53 | 0.14 | 0.31 | FALSE |
17 | GTEx | Brain Cerebellum | TMCO6 | 0.23 | 0.18 | enet | 14 | 0.22 | 3.3e-07 | -4.4 | -5.8 | 5.0e-09 | 0.22 | 0.63 | 0.35 | FALSE |
18 | GTEx | Brain Cerebellum | WDR55 | 0.10 | 0.00 | enet | 11 | 0.02 | 1.0e-01 | -5.8 | -5.4 | 7.0e-08 | 0.23 | 0.21 | 0.30 | FALSE |
19 | GTEx | Brain Cerebellum | HARS | 0.11 | 0.17 | enet | 19 | 0.12 | 1.6e-04 | -6.2 | 6.4 | 1.6e-10 | -0.24 | 0.20 | 0.69 | FALSE |
20 | GTEx | Brain Cortex | CYSTM1 | 0.20 | 0.01 | lasso | 10 | 0.00 | 3.1e-01 | -5.9 | 5.9 | 4.4e-09 | -0.55 | 0.06 | 0.08 | FALSE |
21 | GTEx | Brain Nucleus accumbens basal ganglia | PFDN1 | 0.16 | 0.01 | lasso | 5 | 0.03 | 5.6e-02 | 5.8 | 7.0 | 2.0e-12 | -0.81 | 0.04 | 0.57 | FALSE |
22 | GTEx | Brain Nucleus accumbens basal ganglia | CYSTM1 | 0.22 | 0.08 | lasso | 8 | 0.06 | 8.5e-03 | -5.6 | 5.7 | 1.2e-08 | -0.53 | 0.06 | 0.37 | FALSE |
23 | GTEx | Brain Putamen basal ganglia | LINC01024 | 0.22 | 0.03 | lasso | 6 | 0.04 | 3.6e-02 | -5.9 | 5.2 | 1.6e-07 | -0.50 | 0.08 | 0.14 | FALSE |
24 | GTEx | Breast Mammary Tissue | PFDN1 | 0.17 | 0.20 | lasso | 5 | 0.19 | 4.1e-10 | -5.9 | 6.4 | 1.2e-10 | -0.71 | 0.53 | 0.47 | FALSE |
25 | GTEx | Breast Mammary Tissue | TMCO6 | 0.08 | 0.05 | lasso | 4 | 0.08 | 1.0e-04 | -6.3 | -6.5 | 6.6e-11 | 0.24 | 0.18 | 0.70 | FALSE |
26 | GTEx | Breast Mammary Tissue | IK | 0.07 | 0.06 | lasso | 8 | 0.06 | 3.5e-04 | -6.1 | -6.3 | 3.6e-10 | 0.23 | 0.23 | 0.73 | FALSE |
27 | GTEx | Breast Mammary Tissue (Male) | PFDN1 | 0.24 | 0.04 | lasso | 9 | 0.09 | 4.0e-03 | -5.0 | 7.2 | 4.6e-13 | -0.54 | 0.07 | 0.66 | FALSE |
28 | GTEx | Breast Mammary Tissue (Male) | TMCO6 | 0.12 | -0.01 | lasso | 2 | -0.01 | 4.9e-01 | -4.3 | -5.4 | 7.0e-08 | 0.31 | 0.05 | 0.08 | FALSE |
29 | GTEx | Cells EBV-transformed lymphocytes | PFDN1 | 0.20 | 0.02 | lasso | 3 | 0.03 | 4.4e-02 | -5.9 | 5.7 | 9.1e-09 | -0.62 | 0.12 | 0.27 | FALSE |
30 | GTEx | Cells EBV-transformed lymphocytes | SRA1 | 0.33 | 0.21 | lasso | 9 | 0.19 | 6.3e-07 | 4.4 | -5.6 | 2.1e-08 | 0.35 | 0.52 | 0.27 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | HARS2 | 0.04 | 0.01 | enet | 15 | 0.02 | 1.1e-02 | 5.0 | -5.7 | 1.4e-08 | 0.37 | 0.20 | 0.55 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | PFDN1 | 0.31 | 0.39 | enet | 16 | 0.42 | 1.5e-33 | -5.8 | 5.9 | 3.6e-09 | -0.57 | 0.66 | 0.34 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | TMCO6 | 0.11 | 0.11 | lasso | 6 | 0.11 | 1.8e-08 | -5.1 | -6.3 | 3.3e-10 | 0.25 | 0.74 | 0.26 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | IK | 0.07 | 0.04 | lasso | 4 | 0.02 | 1.0e-02 | -5.7 | -6.2 | 7.0e-10 | 0.26 | 0.30 | 0.64 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | WDR55 | 0.05 | 0.08 | lasso | 13 | 0.07 | 4.0e-06 | -6.1 | -6.2 | 4.6e-10 | 0.24 | 0.23 | 0.77 | FALSE |
36 | GTEx | Cells Transformed fibroblasts | ZMAT2 | 0.04 | 0.02 | lasso | 4 | 0.02 | 2.4e-02 | -5.7 | -5.9 | 4.0e-09 | 0.25 | 0.30 | 0.34 | FALSE |
37 | GTEx | Cells Transformed fibroblasts | SRA1 | 0.27 | 0.22 | lasso | 7 | 0.29 | 2.8e-22 | 4.4 | -5.6 | 2.0e-08 | 0.25 | 0.94 | 0.06 | FALSE |
38 | GTEx | Colon Sigmoid | PFDN1 | 0.33 | 0.32 | lasso | 12 | 0.28 | 2.1e-10 | -5.9 | 6.7 | 2.9e-11 | -0.57 | 0.46 | 0.54 | FALSE |
39 | GTEx | Colon Transverse | TMCO6 | 0.15 | 0.06 | enet | 16 | 0.05 | 1.4e-03 | 4.1 | -5.9 | 3.2e-09 | 0.40 | 0.25 | 0.32 | FALSE |
40 | GTEx | Esophagus Gastroesophageal Junction | PFDN1 | 0.24 | 0.09 | enet | 20 | 0.12 | 3.3e-05 | -5.9 | 7.3 | 4.1e-13 | -0.49 | 0.31 | 0.30 | FALSE |
41 | GTEx | Esophagus Mucosa | TMCO6 | 0.04 | 0.02 | lasso | 4 | 0.01 | 6.1e-02 | -4.5 | -6.2 | 4.6e-10 | 0.32 | 0.22 | 0.32 | FALSE |
42 | GTEx | Esophagus Mucosa | ZMAT2 | 0.06 | 0.02 | enet | 16 | 0.02 | 1.1e-02 | 4.7 | -6.0 | 1.5e-09 | 0.31 | 0.35 | 0.21 | FALSE |
43 | GTEx | Esophagus Muscularis | PFDN1 | 0.25 | 0.26 | lasso | 4 | 0.27 | 1.3e-16 | -5.6 | 5.8 | 6.6e-09 | -0.56 | 0.68 | 0.32 | FALSE |
44 | GTEx | Esophagus Muscularis | CYSTM1 | 0.09 | 0.08 | lasso | 1 | 0.08 | 1.2e-05 | -5.6 | 5.6 | 1.6e-08 | -0.56 | 0.43 | 0.44 | FALSE |
45 | GTEx | Esophagus Muscularis | WDR55 | 0.05 | 0.01 | lasso | 4 | 0.03 | 6.6e-03 | -5.4 | -6.1 | 7.9e-10 | 0.22 | 0.20 | 0.33 | FALSE |
46 | GTEx | Heart Atrial Appendage | PFDN1 | 0.12 | 0.14 | lasso | 6 | 0.12 | 4.3e-06 | -5.8 | 5.8 | 5.3e-09 | -0.57 | 0.57 | 0.39 | FALSE |
47 | GTEx | Heart Left Ventricle | PFDN1 | 0.31 | 0.33 | enet | 17 | 0.33 | 4.2e-18 | -5.8 | 6.4 | 1.9e-10 | -0.58 | 0.64 | 0.36 | FALSE |
48 | GTEx | Heart Left Ventricle | TMCO6 | 0.05 | 0.01 | lasso | 5 | 0.00 | 6.2e-01 | -5.7 | -5.4 | 7.1e-08 | 0.22 | 0.23 | 0.09 | FALSE |
49 | GTEx | Heart Left Ventricle | PCDHB5 | 0.11 | 0.05 | lasso | 3 | 0.06 | 5.3e-04 | 3.7 | 5.7 | 1.3e-08 | -0.16 | 0.16 | 0.45 | FALSE |
50 | GTEx | Lung | TMCO6 | 0.06 | 0.03 | lasso | 3 | 0.03 | 1.1e-03 | -4.4 | -5.9 | 3.8e-09 | 0.23 | 0.52 | 0.36 | FALSE |
51 | GTEx | Muscle Skeletal | PFDN1 | 0.45 | 0.56 | enet | 22 | 0.56 | 6.5e-66 | -6.0 | 6.0 | 1.6e-09 | -0.56 | 0.63 | 0.37 | FALSE |
52 | GTEx | Nerve Tibial | TMCO6 | 0.22 | 0.20 | enet | 12 | 0.20 | 2.7e-14 | -4.4 | -5.8 | 6.5e-09 | 0.21 | 0.98 | 0.02 | FALSE |
53 | GTEx | Nerve Tibial | IK | 0.08 | 0.08 | lasso | 8 | 0.06 | 8.3e-05 | -6.0 | -5.9 | 2.8e-09 | 0.22 | 0.24 | 0.75 | FALSE |
54 | GTEx | Nerve Tibial | CYSTM1 | 0.20 | 0.20 | lasso | 3 | 0.20 | 5.5e-14 | -5.8 | 5.8 | 6.1e-09 | -0.57 | 0.74 | 0.26 | FALSE |
55 | GTEx | Nerve Tibial | WDR55 | 0.05 | 0.01 | enet | 8 | 0.04 | 7.5e-04 | -2.5 | -6.0 | 1.6e-09 | 0.67 | 0.14 | 0.58 | FALSE |
56 | GTEx | Nerve Tibial | HARS | 0.07 | 0.01 | enet | 16 | 0.04 | 1.1e-03 | -5.7 | 6.0 | 2.1e-09 | -0.27 | 0.27 | 0.56 | FALSE |
57 | GTEx | Skin Not Sun Exposed Suprapubic | PFDN1 | 0.10 | 0.10 | lasso | 3 | 0.10 | 5.3e-06 | -5.6 | 5.8 | 4.9e-09 | -0.55 | 0.59 | 0.30 | FALSE |
58 | GTEx | Skin Not Sun Exposed Suprapubic | IK | 0.08 | 0.05 | lasso | 14 | 0.04 | 3.0e-03 | -6.4 | -5.6 | 2.3e-08 | 0.20 | 0.24 | 0.59 | FALSE |
59 | GTEx | Skin Not Sun Exposed Suprapubic | ZMAT2 | 0.16 | 0.01 | enet | 19 | 0.04 | 1.7e-03 | -6.1 | -6.2 | 5.6e-10 | 0.32 | 0.12 | 0.14 | FALSE |
60 | GTEx | Skin Sun Exposed Lower leg | PFDN1 | 0.16 | 0.12 | enet | 12 | 0.11 | 3.9e-09 | -5.8 | 5.7 | 1.1e-08 | -0.42 | 0.69 | 0.31 | FALSE |
61 | GTEx | Skin Sun Exposed Lower leg | WDR55 | 0.04 | 0.01 | enet | 10 | 0.01 | 2.8e-02 | -6.3 | -6.9 | 4.7e-12 | 0.34 | 0.15 | 0.69 | FALSE |
62 | GTEx | Skin Sun Exposed Lower leg | ZMAT2 | 0.12 | 0.12 | enet | 22 | 0.15 | 1.7e-12 | -5.7 | -6.3 | 3.6e-10 | 0.36 | 0.19 | 0.81 | FALSE |
63 | GTEx | Skin Sun Exposed Lower leg | SRA1 | 0.05 | 0.04 | lasso | 3 | 0.06 | 1.0e-05 | -4.2 | -5.8 | 5.7e-09 | 0.27 | 0.47 | 0.38 | FALSE |
64 | GTEx | Spleen | PFDN1 | 0.26 | 0.02 | lasso | 5 | 0.12 | 6.0e-04 | 5.8 | 5.9 | 3.9e-09 | -0.69 | 0.03 | 0.58 | FALSE |
65 | GTEx | Testis | PFDN1 | 0.15 | 0.00 | lasso | 8 | 0.00 | 4.9e-01 | -5.8 | 5.5 | 3.1e-08 | -0.57 | 0.07 | 0.10 | FALSE |
66 | GTEx | Testis | ZMAT2 | 0.09 | 0.12 | lasso | 1 | 0.10 | 2.1e-05 | -6.4 | -6.4 | 2.1e-10 | 0.22 | 0.15 | 0.84 | FALSE |
67 | GTEx | Testis | SRA1 | 0.16 | 0.02 | lasso | 7 | 0.06 | 1.6e-03 | -4.4 | -5.4 | 7.2e-08 | 0.33 | 0.25 | 0.16 | FALSE |
68 | GTEx | Thyroid | PFDN1 | 0.10 | 0.07 | lasso | 4 | 0.05 | 1.5e-04 | -5.8 | 5.9 | 4.5e-09 | -0.57 | 0.63 | 0.36 | FALSE |
69 | GTEx | Thyroid | TMCO6 | 0.22 | 0.22 | lasso | 6 | 0.22 | 1.6e-16 | -4.3 | -5.1 | 3.1e-07 | 0.19 | 1.00 | 0.00 | FALSE |
70 | GTEx | Thyroid | CYSTM1 | 0.07 | 0.05 | lasso | 5 | 0.03 | 3.2e-03 | -5.6 | 5.4 | 7.3e-08 | -0.50 | 0.61 | 0.24 | FALSE |
71 | GTEx | Vagina | IK | 0.27 | 0.09 | enet | 29 | 0.15 | 2.4e-04 | -4.3 | -6.2 | 5.2e-10 | 0.21 | 0.35 | 0.47 | FALSE |
72 | METSIM | Adipose | CYSTM1 | 0.05 | 0.01 | bslmm | 333 | 0.02 | 1.4e-04 | -5.9 | 5.5 | 3.4e-08 | -0.38 | 0.22 | 0.17 | FALSE |
73 | METSIM | Adipose | DND1 | 0.08 | 0.11 | lasso | 5 | 0.10 | 7.3e-15 | -5.8 | 5.6 | 2.3e-08 | -0.25 | 0.36 | 0.64 | FALSE |
74 | METSIM | Adipose | PFDN1 | 0.19 | 0.20 | enet | 32 | 0.20 | 4.1e-29 | -5.9 | 5.7 | 1.1e-08 | -0.57 | 0.65 | 0.35 | FALSE |
75 | METSIM | Adipose | TMCO6 | 0.10 | 0.08 | lasso | 8 | 0.11 | 7.0e-16 | -4.4 | -5.3 | 1.0e-07 | 0.19 | 1.00 | 0.00 | FALSE |
76 | ROSMAP | Brain Pre-frontal Cortex | PFDN1 | 0.05 | 0.05 | lasso | 1 | 0.04 | 2.1e-06 | -5.9 | 5.9 | 4.8e-09 | -0.55 | 0.68 | 0.31 | FALSE |
77 | ROSMAP | Brain Pre-frontal Cortex | CYSTM1 | 0.21 | 0.25 | bslmm | 322 | 0.26 | 1.0e-33 | -5.9 | 5.6 | 2.3e-08 | -0.49 | 0.64 | 0.36 | FALSE |
78 | ROSMAP | Brain Pre-frontal Cortex | NDUFA2 | 0.09 | 0.12 | enet | 22 | 0.12 | 1.3e-15 | -6.3 | 6.0 | 1.6e-09 | -0.29 | 0.15 | 0.85 | FALSE |
79 | ROSMAP | Brain Pre-frontal Cortex | ZMAT2 | 0.03 | 0.02 | bslmm | 185 | 0.02 | 6.5e-04 | -6.2 | -7.9 | 3.0e-15 | 0.52 | 0.16 | 0.81 | TRUE |
80 | ROSMAP | Brain Pre-frontal Cortex | HARS | 0.02 | 0.00 | enet | 4 | 0.01 | 2.1e-02 | 4.4 | 5.6 | 2.1e-08 | -0.27 | 0.05 | 0.14 | FALSE |
81 | ROSMAP | Brain Pre-frontal Cortex | PCDHB13 | 0.03 | 0.02 | lasso | 3 | 0.02 | 7.1e-04 | -6.1 | 5.8 | 5.6e-09 | -0.25 | 0.01 | 0.92 | FALSE |
82 | ROSMAP | Brain Pre-frontal Cortex | PCDHA8 | 0.04 | 0.03 | enet | 4 | 0.03 | 3.4e-05 | -6.1 | -5.8 | 7.1e-09 | 0.24 | 0.04 | 0.96 | FALSE |
83 | YFS | Blood | APBB3 | 0.01 | 0.00 | bslmm | 318 | 0.00 | 2.7e-02 | -4.3 | 6.3 | 3.5e-10 | -0.34 | 0.20 | 0.06 | FALSE |
84 | YFS | Blood | HBEGF | 0.02 | 0.02 | lasso | 3 | 0.02 | 9.8e-07 | 5.8 | 5.4 | 5.2e-08 | -0.82 | 0.19 | 0.81 | FALSE |
85 | YFS | Blood | NDUFA2 | 0.08 | 0.11 | lasso | 6 | 0.11 | 2.0e-33 | -6.3 | 6.2 | 4.7e-10 | -0.20 | 0.21 | 0.79 | FALSE |
86 | YFS | Blood | TMCO6 | 0.01 | 0.00 | blup | 329 | 0.01 | 4.1e-03 | -6.1 | -5.8 | 7.9e-09 | 0.33 | 0.31 | 0.63 | FALSE |
87 | YFS | Blood | WDR55 | 0.15 | 0.21 | bslmm | 337 | 0.21 | 8.6e-67 | -6.2 | -6.2 | 4.9e-10 | 0.25 | 0.18 | 0.82 | FALSE |
88 | YFS | Blood | ZMAT2 | 0.04 | 0.04 | enet | 12 | 0.04 | 1.4e-13 | -5.1 | -5.9 | 3.4e-09 | 0.22 | 0.99 | 0.01 | FALSE |
89 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | NDUFA2 | 0.07 | 0.04 | blup | 41 | 0.03 | 1.8e-03 | -6.3 | 6.4 | 1.4e-10 | -0.22 | 0.02 | 0.97 | FALSE |
90 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PCDHA4 | 0.01 | 0.02 | lasso | 1 | 0.01 | 4.9e-04 | -5.7 | -5.7 | 1.5e-08 | 0.25 | 0.00 | 0.97 | FALSE |
91 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PFDN1 | 0.02 | 0.01 | enet | 4 | 0.02 | 7.8e-05 | -6.0 | 6.0 | 1.7e-09 | -0.55 | 0.41 | 0.42 | FALSE |
92 | The Cancer Genome Atlas | Breast Invasive Carcinoma | WDR55 | 0.10 | 0.03 | enet | 8 | 0.04 | 3.3e-09 | -6.3 | -6.5 | 8.8e-11 | 0.24 | 0.02 | 0.98 | FALSE |
93 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ZMAT2 | 0.03 | 0.03 | enet | 5 | 0.03 | 7.7e-07 | 4.6 | -5.7 | 1.3e-08 | 0.22 | 0.05 | 0.94 | FALSE |
94 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | WDR55 | 0.04 | 0.04 | blup | 44 | 0.03 | 8.2e-03 | -6.3 | -6.1 | 1.1e-09 | 0.23 | 0.02 | 0.78 | FALSE |
95 | The Cancer Genome Atlas | Colon Adenocarcinoma | WDR55 | 0.09 | 0.08 | enet | 12 | 0.12 | 1.5e-07 | -6.2 | -5.2 | 2.6e-07 | 0.20 | 0.02 | 0.98 | FALSE |
96 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NDUFA2 | 0.04 | 0.07 | lasso | 1 | 0.06 | 1.5e-07 | -6.2 | 6.2 | 4.4e-10 | -0.24 | 0.02 | 0.98 | FALSE |
97 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PCDHA4 | 0.03 | 0.01 | blup | 31 | 0.01 | 3.3e-02 | -5.7 | -5.2 | 1.7e-07 | 0.24 | 0.00 | 0.82 | FALSE |
98 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C5orf32 | 0.03 | 0.04 | lasso | 2 | 0.04 | 3.1e-05 | -5.9 | 6.1 | 1.3e-09 | -0.58 | 0.46 | 0.46 | FALSE |
99 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PFDN1 | 0.05 | 0.01 | blup | 47 | 0.01 | 1.9e-02 | -6.2 | 6.9 | 6.5e-12 | -0.66 | 0.02 | 0.73 | FALSE |
100 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | PFDN1 | 0.07 | 0.05 | lasso | 2 | 0.05 | 2.0e-03 | -5.8 | 5.8 | 5.2e-09 | -0.57 | 0.18 | 0.22 | FALSE |
101 | The Cancer Genome Atlas | Lung Adenocarcinoma | NDUFA2 | 0.07 | 0.04 | enet | 4 | 0.04 | 3.6e-05 | -6.3 | 5.6 | 1.8e-08 | -0.22 | 0.01 | 0.97 | FALSE |
102 | The Cancer Genome Atlas | Lung Adenocarcinoma | PFDN1 | 0.03 | 0.02 | blup | 47 | 0.02 | 5.5e-03 | -6.7 | 6.9 | 5.4e-12 | -0.92 | 0.01 | 0.89 | FALSE |
103 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PFDN1 | 0.04 | 0.02 | lasso | 3 | 0.03 | 2.0e-04 | -5.9 | 6.0 | 1.6e-09 | -0.64 | 0.29 | 0.37 | FALSE |
104 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | WDR55 | 0.02 | 0.02 | lasso | 2 | 0.02 | 2.3e-03 | -6.0 | -6.0 | 1.5e-09 | 0.23 | 0.02 | 0.92 | FALSE |
105 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | NDUFA2 | 0.03 | 0.02 | blup | 42 | 0.04 | 1.1e-03 | 4.1 | 5.4 | 7.6e-08 | -0.22 | 0.02 | 0.78 | FALSE |
106 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | WDR55 | 0.11 | 0.09 | lasso | 6 | 0.07 | 1.4e-05 | -6.3 | -6.3 | 2.5e-10 | 0.25 | 0.02 | 0.98 | FALSE |
107 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | NDUFA2 | 0.10 | 0.04 | blup | 43 | 0.06 | 1.4e-03 | -6.2 | 6.4 | 2.1e-10 | -0.24 | 0.02 | 0.93 | FALSE |
108 | The Cancer Genome Atlas | Prostate Adenocarcinoma | HBEGF | 0.03 | 0.03 | lasso | 3 | 0.02 | 2.2e-03 | -6.7 | 6.8 | 1.0e-11 | -0.79 | 0.00 | 0.98 | FALSE |
109 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NDUFA2 | 0.03 | 0.02 | blup | 41 | 0.03 | 4.6e-04 | -6.3 | 6.3 | 2.2e-10 | -0.22 | 0.02 | 0.90 | FALSE |
110 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PFDN1 | 0.06 | 0.07 | lasso | 5 | 0.06 | 3.2e-07 | -5.9 | 5.9 | 3.4e-09 | -0.58 | 0.51 | 0.49 | FALSE |
111 | The Cancer Genome Atlas | Prostate Adenocarcinoma | WDR55 | 0.07 | 0.06 | blup | 44 | 0.06 | 1.7e-06 | -6.3 | -5.8 | 7.1e-09 | 0.23 | 0.02 | 0.98 | FALSE |
112 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZMAT2 | 0.03 | 0.03 | enet | 6 | 0.04 | 1.3e-04 | -6.2 | -5.9 | 3.7e-09 | 0.24 | 0.02 | 0.91 | FALSE |
113 | The Cancer Genome Atlas | Soft Tissue Sarcoma | WDR55 | 0.07 | 0.08 | lasso | 5 | 0.08 | 1.8e-05 | -6.3 | -5.8 | 5.8e-09 | 0.23 | 0.02 | 0.96 | FALSE |
114 | The Cancer Genome Atlas | Stomach Adenocarcinoma | WDR55 | 0.04 | 0.01 | blup | 45 | 0.03 | 3.7e-03 | 4.8 | -5.3 | 1.5e-07 | 0.20 | 0.02 | 0.72 | FALSE |
115 | The Cancer Genome Atlas | Thyroid Carcinoma | NDUFA2 | 0.03 | 0.01 | blup | 41 | 0.03 | 8.3e-04 | -6.3 | 6.5 | 7.1e-11 | -0.23 | 0.02 | 0.89 | FALSE |
116 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC4A9 | 0.07 | 0.02 | blup | 30 | 0.06 | 3.1e-06 | 4.5 | -5.9 | 4.3e-09 | 0.45 | 0.40 | 0.13 | FALSE |
117 | The Cancer Genome Atlas | Thyroid Carcinoma | WDR55 | 0.25 | 0.12 | lasso | 5 | 0.12 | 7.0e-12 | -6.0 | -5.6 | 1.9e-08 | 0.21 | 0.03 | 0.97 | FALSE |
118 | The Cancer Genome Atlas | Thyroid Carcinoma | ZMAT2 | 0.03 | 0.02 | blup | 38 | 0.03 | 9.6e-04 | -6.2 | -6.3 | 4.0e-10 | 0.23 | 0.02 | 0.94 | FALSE |