Best TWAS P=6.02e-142 · Best GWAS P=1.01e-136 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CHKB | 0.03 | 0.05 | lasso | 2 | 0.04 | 1.0e-05 | 12.1 | -14.1 | 4.4e-45 | -0.35 | 0.89 | 0.01 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | CPT1B | 0.10 | 0.02 | blup | 301 | 0.05 | 6.9e-07 | -11.3 | -17.0 | 1.8e-64 | -0.53 | 0.21 | 0.47 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | RPL23AP82 | 0.07 | 0.00 | bslmm | 198 | 0.01 | 9.3e-03 | -12.6 | 14.3 | 3.2e-46 | 0.35 | 0.05 | 0.05 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SCO2 | 0.06 | 0.08 | lasso | 3 | 0.08 | 1.4e-09 | 19.7 | 15.8 | 1.4e-56 | 0.59 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | CHKB | 0.16 | 0.11 | lasso | 10 | 0.12 | 6.7e-10 | -16.1 | -15.9 | 9.7e-57 | -0.43 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | MAPK12 | 0.39 | 0.27 | lasso | 4 | 0.27 | 5.4e-22 | 5.3 | 5.7 | 1.2e-08 | 0.06 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | CHKB-AS1 | 0.12 | 0.09 | lasso | 1 | 0.08 | 5.0e-07 | 12.1 | 12.1 | 1.3e-33 | 0.28 | 0.90 | 0.02 | FALSE |
8 | GTEx | Adipose Subcutaneous | CPT1B | 0.10 | 0.07 | lasso | 6 | 0.07 | 1.7e-06 | 7.2 | -11.7 | 2.3e-31 | -0.31 | 0.51 | 0.34 | FALSE |
9 | GTEx | Adipose Visceral Omentum | CHKB | 0.17 | 0.05 | lasso | 5 | 0.04 | 4.6e-03 | -15.7 | -15.5 | 4.7e-54 | -0.42 | 0.19 | 0.06 | FALSE |
10 | GTEx | Adipose Visceral Omentum | MAPK12 | 0.30 | 0.29 | lasso | 3 | 0.29 | 2.0e-15 | 5.4 | 5.8 | 7.2e-09 | 0.06 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adipose Visceral Omentum | CHKB-AS1 | 0.15 | 0.01 | enet | 25 | 0.02 | 4.8e-02 | 12.1 | 5.7 | 1.1e-08 | 0.19 | 0.15 | 0.06 | FALSE |
12 | GTEx | Adipose Visceral Omentum | CPT1B | 0.16 | 0.10 | lasso | 5 | 0.08 | 3.9e-05 | 7.2 | -7.2 | 7.8e-13 | -0.19 | 0.67 | 0.03 | FALSE |
13 | GTEx | Adrenal Gland | CHKB | 0.29 | 0.11 | lasso | 4 | 0.12 | 6.0e-05 | -15.7 | -13.0 | 7.5e-39 | -0.39 | 0.20 | 0.07 | FALSE |
14 | GTEx | Adrenal Gland | MAPK12 | 0.23 | 0.23 | lasso | 2 | 0.21 | 4.8e-08 | 5.3 | 5.3 | 9.9e-08 | 0.05 | 0.96 | 0.00 | FALSE |
15 | GTEx | Artery Aorta | CHKB | 0.32 | 0.28 | enet | 20 | 0.30 | 4.3e-17 | -16.1 | -15.7 | 1.8e-55 | -0.39 | 1.00 | 0.00 | FALSE |
16 | GTEx | Artery Aorta | CPT1B | 0.18 | 0.00 | enet | 22 | 0.02 | 2.3e-02 | -5.2 | -17.7 | 2.6e-70 | -0.50 | 0.03 | 0.56 | FALSE |
17 | GTEx | Artery Tibial | CHKB | 0.33 | 0.14 | enet | 29 | 0.23 | 5.1e-18 | -16.1 | -19.8 | 1.9e-87 | -0.55 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Tibial | MAPK12 | 0.10 | 0.04 | lasso | 3 | 0.03 | 2.9e-03 | 5.4 | 5.3 | 1.1e-07 | 0.03 | 0.41 | 0.06 | FALSE |
19 | GTEx | Brain Cerebellum | CHKB | 0.31 | 0.22 | lasso | 5 | 0.22 | 2.8e-07 | 4.3 | -8.0 | 1.5e-15 | -0.24 | 0.48 | 0.04 | FALSE |
20 | GTEx | Brain Cerebellum | CPT1B | 0.20 | -0.01 | enet | 30 | -0.01 | 7.0e-01 | 15.1 | -5.5 | 3.4e-08 | -0.18 | 0.04 | 0.05 | FALSE |
21 | GTEx | Brain Cortex | CHKB | 0.32 | 0.16 | lasso | 4 | 0.19 | 5.8e-06 | 14.8 | -11.2 | 6.0e-29 | -0.40 | 0.20 | 0.05 | FALSE |
22 | GTEx | Brain Cortex | MAPK12 | 0.35 | 0.39 | lasso | 4 | 0.35 | 2.1e-10 | 5.4 | 6.0 | 2.7e-09 | 0.05 | 0.96 | 0.00 | FALSE |
23 | GTEx | Brain Cortex | RP3-402G11.26 | 0.39 | 0.17 | lasso | 4 | 0.24 | 3.7e-07 | 6.4 | 5.2 | 2.3e-07 | 0.01 | 0.69 | 0.02 | FALSE |
24 | GTEx | Brain Hypothalamus | CHKB | 0.28 | -0.01 | lasso | 3 | -0.01 | 7.6e-01 | 12.1 | -12.3 | 8.2e-35 | -0.26 | 0.04 | 0.07 | FALSE |
25 | GTEx | Brain Hypothalamus | TUBGCP6 | 0.49 | 0.04 | lasso | 8 | 0.01 | 2.3e-01 | 7.8 | -5.7 | 9.7e-09 | -0.17 | 0.05 | 0.06 | TRUE |
26 | GTEx | Brain Nucleus accumbens basal ganglia | MAPK12 | 0.49 | 0.24 | lasso | 9 | 0.27 | 8.3e-08 | 5.4 | 6.3 | 2.5e-10 | 0.09 | 0.53 | 0.03 | FALSE |
27 | GTEx | Brain Putamen basal ganglia | RP3-402G11.26 | 0.53 | 0.33 | enet | 16 | 0.34 | 8.8e-09 | 4.4 | 5.9 | 3.6e-09 | 0.03 | 0.79 | 0.01 | FALSE |
28 | GTEx | Breast Mammary Tissue | CHKB | 0.13 | 0.10 | enet | 16 | 0.07 | 2.5e-04 | 11.6 | -11.9 | 9.3e-33 | -0.34 | 0.19 | 0.29 | FALSE |
29 | GTEx | Breast Mammary Tissue | SCO2 | 0.18 | 0.01 | enet | 14 | 0.08 | 4.1e-05 | 3.3 | 8.6 | 1.2e-17 | 0.26 | 0.27 | 0.12 | FALSE |
30 | GTEx | Breast Mammary Tissue | CHKB-AS1 | 0.10 | 0.10 | lasso | 3 | 0.05 | 2.0e-03 | 12.1 | 12.0 | 4.4e-33 | 0.28 | 0.22 | 0.04 | FALSE |
31 | GTEx | Breast Mammary Tissue | CTA-384D8.36 | 0.19 | 0.05 | enet | 15 | 0.09 | 1.9e-05 | 3.3 | 7.5 | 8.3e-14 | 0.19 | 0.53 | 0.05 | FALSE |
32 | GTEx | Breast Mammary Tissue (Male) | CHKB | 0.07 | 0.00 | lasso | 1 | -0.01 | 4.7e-01 | -11.3 | -11.3 | 1.5e-29 | -0.30 | 0.03 | 0.06 | FALSE |
33 | GTEx | Breast Mammary Tissue (Male) | CHKB-AS1 | 0.07 | -0.01 | lasso | 2 | -0.01 | 4.7e-01 | 16.0 | 15.6 | 1.4e-54 | 0.46 | 0.02 | 0.10 | FALSE |
34 | GTEx | Breast Mammary Tissue (Male) | CPT1B | 0.11 | 0.14 | lasso | 3 | 0.09 | 5.0e-03 | 7.2 | -7.2 | 6.8e-13 | -0.19 | 0.06 | 0.06 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | CHKB | 0.14 | 0.03 | lasso | 4 | 0.03 | 3.8e-02 | 11.6 | -13.4 | 8.1e-41 | -0.33 | 0.03 | 0.42 | FALSE |
36 | GTEx | Breast Mammary Tissue (Female) | SCO2 | 0.13 | 0.00 | enet | 12 | 0.06 | 9.8e-03 | -0.6 | 8.8 | 1.5e-18 | 0.26 | 0.05 | 0.09 | FALSE |
37 | GTEx | Breast Mammary Tissue (Female) | CTA-384D8.36 | 0.14 | 0.01 | enet | 15 | 0.04 | 2.0e-02 | -0.6 | 8.7 | 2.9e-18 | 0.22 | 0.05 | 0.07 | FALSE |
38 | GTEx | Cells EBV-transformed lymphocytes | CPT1B | 0.36 | 0.11 | lasso | 5 | 0.08 | 1.3e-03 | -15.7 | -17.7 | 5.4e-70 | -0.44 | 0.09 | 0.45 | FALSE |
39 | GTEx | Cells Transformed fibroblasts | CHKB | 0.31 | 0.21 | enet | 27 | 0.29 | 4.8e-22 | -16.1 | -18.0 | 2.0e-72 | -0.50 | 1.00 | 0.00 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | MAPK12 | 0.36 | 0.23 | enet | 31 | 0.28 | 1.6e-21 | 5.4 | 7.7 | 1.7e-14 | 0.11 | 1.00 | 0.00 | TRUE |
41 | GTEx | Cells Transformed fibroblasts | CHKB-AS1 | 0.20 | 0.11 | lasso | 4 | 0.15 | 3.6e-11 | 11.6 | 12.3 | 1.4e-34 | 0.29 | 1.00 | 0.00 | FALSE |
42 | GTEx | Colon Sigmoid | MAPK12 | 0.39 | 0.21 | lasso | 6 | 0.16 | 1.9e-06 | 5.4 | 5.6 | 2.1e-08 | 0.04 | 0.89 | 0.01 | FALSE |
43 | GTEx | Colon Transverse | CHKB | 0.16 | 0.02 | enet | 15 | 0.05 | 3.2e-03 | -11.3 | -15.5 | 3.6e-54 | -0.45 | 0.25 | 0.43 | FALSE |
44 | GTEx | Colon Transverse | MAPK12 | 0.35 | 0.27 | lasso | 5 | 0.26 | 6.8e-13 | 5.4 | 5.8 | 7.8e-09 | 0.06 | 1.00 | 0.00 | FALSE |
45 | GTEx | Esophagus Gastroesophageal Junction | CHKB | 0.19 | 0.09 | lasso | 4 | 0.05 | 5.2e-03 | 12.1 | -13.3 | 1.3e-40 | -0.33 | 0.17 | 0.09 | FALSE |
46 | GTEx | Esophagus Mucosa | CHKB | 0.16 | 0.04 | lasso | 8 | 0.07 | 2.1e-05 | -16.1 | -15.8 | 2.7e-56 | -0.45 | 0.58 | 0.10 | FALSE |
47 | GTEx | Esophagus Mucosa | MAPK12 | 0.25 | 0.23 | lasso | 2 | 0.23 | 3.8e-15 | 5.4 | 5.4 | 5.4e-08 | 0.04 | 1.00 | 0.00 | FALSE |
48 | GTEx | Esophagus Mucosa | CHKB-AS1 | 0.21 | 0.18 | lasso | 6 | 0.18 | 4.3e-12 | 12.1 | 12.9 | 3.7e-38 | 0.32 | 1.00 | 0.00 | FALSE |
49 | GTEx | Esophagus Mucosa | CPT1B | 0.15 | 0.08 | lasso | 6 | 0.07 | 3.7e-05 | -16.1 | -17.0 | 1.8e-64 | -0.43 | 0.84 | 0.03 | FALSE |
50 | GTEx | Esophagus Muscularis | CHKB | 0.26 | 0.18 | lasso | 7 | 0.18 | 5.0e-11 | 11.6 | -12.7 | 5.0e-37 | -0.33 | 1.00 | 0.00 | FALSE |
51 | GTEx | Esophagus Muscularis | MAPK12 | 0.27 | 0.08 | lasso | 5 | 0.12 | 9.7e-08 | 5.3 | 6.3 | 2.6e-10 | 0.10 | 0.94 | 0.00 | FALSE |
52 | GTEx | Heart Atrial Appendage | CHKB | 0.18 | 0.08 | lasso | 5 | 0.14 | 7.3e-07 | -7.5 | -15.6 | 1.6e-54 | -0.48 | 0.74 | 0.08 | FALSE |
53 | GTEx | Heart Atrial Appendage | MAPK12 | 0.21 | 0.11 | lasso | 2 | 0.18 | 1.7e-08 | 5.4 | 5.4 | 6.6e-08 | 0.03 | 0.49 | 0.12 | FALSE |
54 | GTEx | Heart Atrial Appendage | CHKB-AS1 | 0.13 | 0.00 | enet | 13 | 0.04 | 9.8e-03 | -16.4 | 9.6 | 8.0e-22 | 0.30 | 0.08 | 0.04 | FALSE |
55 | GTEx | Heart Atrial Appendage | RP3-402G11.27 | 0.16 | 0.00 | enet | 18 | 0.05 | 3.1e-03 | 2.2 | -5.6 | 2.3e-08 | -0.01 | 0.07 | 0.07 | TRUE |
56 | GTEx | Heart Left Ventricle | CHKB | 0.11 | 0.03 | enet | 19 | 0.01 | 5.6e-02 | -16.2 | -10.5 | 9.1e-26 | -0.34 | 0.12 | 0.05 | FALSE |
57 | GTEx | Heart Left Ventricle | MAPK12 | 0.30 | 0.13 | enet | 14 | 0.19 | 3.2e-10 | 5.4 | 5.9 | 4.6e-09 | 0.04 | 0.97 | 0.00 | FALSE |
58 | GTEx | Lung | MAPK8IP2 | 0.10 | 0.06 | lasso | 4 | 0.03 | 3.9e-03 | -11.3 | 11.4 | 3.5e-30 | 0.30 | 0.17 | 0.03 | FALSE |
59 | GTEx | Lung | LMF2 | 0.16 | 0.00 | enet | 18 | 0.01 | 1.2e-01 | 1.5 | -5.2 | 1.9e-07 | -0.14 | 0.06 | 0.03 | FALSE |
60 | GTEx | Lung | CHKB | 0.16 | 0.05 | lasso | 5 | 0.06 | 3.2e-05 | 12.1 | -12.2 | 2.3e-34 | -0.29 | 0.81 | 0.02 | FALSE |
61 | GTEx | Lung | MAPK12 | 0.23 | 0.20 | lasso | 6 | 0.20 | 4.2e-15 | 5.4 | 6.4 | 1.8e-10 | 0.07 | 1.00 | 0.00 | FALSE |
62 | GTEx | Lung | CPT1B | 0.12 | 0.03 | lasso | 3 | 0.07 | 6.8e-06 | 8.0 | -14.2 | 1.7e-45 | -0.37 | 0.81 | 0.04 | FALSE |
63 | GTEx | Muscle Skeletal | CHKB | 0.10 | 0.09 | enet | 13 | 0.09 | 8.2e-09 | -16.1 | -16.2 | 5.5e-59 | -0.41 | 1.00 | 0.00 | FALSE |
64 | GTEx | Muscle Skeletal | SCO2 | 0.15 | 0.07 | lasso | 6 | 0.04 | 4.6e-05 | 19.7 | 19.8 | 7.1e-87 | 0.73 | 0.57 | 0.18 | FALSE |
65 | GTEx | Muscle Skeletal | MAPK12 | 0.08 | 0.02 | enet | 14 | 0.04 | 1.6e-04 | 3.8 | 13.4 | 1.1e-40 | 0.34 | 0.29 | 0.16 | FALSE |
66 | GTEx | Muscle Skeletal | CPT1B | 0.11 | 0.12 | lasso | 2 | 0.11 | 6.6e-11 | -16.1 | -16.6 | 1.4e-61 | -0.44 | 1.00 | 0.00 | FALSE |
67 | GTEx | Muscle Skeletal | CTA-384D8.36 | 0.14 | 0.02 | enet | 18 | 0.01 | 5.0e-02 | 19.7 | 13.8 | 3.1e-43 | 0.44 | 0.08 | 0.10 | FALSE |
68 | GTEx | Nerve Tibial | LMF2 | 0.18 | 0.06 | enet | 14 | 0.02 | 2.3e-02 | 12.2 | -9.7 | 2.2e-22 | -0.29 | 0.60 | 0.03 | FALSE |
69 | GTEx | Nerve Tibial | CHKB | 0.27 | 0.08 | enet | 21 | 0.18 | 1.8e-12 | -16.1 | -19.6 | 1.2e-85 | -0.51 | 0.99 | 0.01 | FALSE |
70 | GTEx | Nerve Tibial | MAPK12 | 0.37 | 0.24 | lasso | 6 | 0.20 | 2.8e-14 | 5.4 | 5.8 | 5.2e-09 | 0.05 | 1.00 | 0.00 | FALSE |
71 | GTEx | Nerve Tibial | CHKB-AS1 | 0.15 | 0.02 | lasso | 4 | 0.02 | 1.4e-02 | 12.1 | 13.4 | 5.7e-41 | 0.23 | 0.06 | 0.19 | FALSE |
72 | GTEx | Pancreas | LMF2 | 0.49 | 0.36 | lasso | 4 | 0.38 | 4.0e-17 | 12.5 | -12.7 | 1.0e-36 | -0.53 | 1.00 | 0.00 | FALSE |
73 | GTEx | Pancreas | MAPK12 | 0.32 | 0.24 | lasso | 3 | 0.28 | 3.2e-12 | 5.4 | 5.6 | 2.4e-08 | 0.04 | 1.00 | 0.00 | FALSE |
74 | GTEx | Prostate | CHKB | 0.25 | 0.04 | lasso | 4 | 0.07 | 6.9e-03 | -7.5 | -7.0 | 3.1e-12 | -0.23 | 0.10 | 0.05 | FALSE |
75 | GTEx | Prostate | MAPK12 | 0.49 | 0.29 | lasso | 6 | 0.39 | 7.4e-11 | 5.3 | 5.8 | 6.7e-09 | 0.06 | 0.76 | 0.02 | FALSE |
76 | GTEx | Skin Not Sun Exposed Suprapubic | CHKB | 0.20 | 0.05 | lasso | 7 | 0.05 | 8.7e-04 | -16.4 | -16.0 | 1.0e-57 | -0.46 | 0.69 | 0.04 | FALSE |
77 | GTEx | Skin Not Sun Exposed Suprapubic | MAPK12 | 0.20 | 0.08 | lasso | 6 | 0.14 | 2.8e-08 | 5.4 | 5.8 | 7.6e-09 | 0.02 | 0.95 | 0.01 | FALSE |
78 | GTEx | Skin Not Sun Exposed Suprapubic | CHKB-AS1 | 0.17 | 0.10 | lasso | 3 | 0.08 | 2.3e-05 | 12.1 | 11.5 | 9.1e-31 | 0.26 | 0.27 | 0.05 | TRUE |
79 | GTEx | Skin Sun Exposed Lower leg | CHKB | 0.16 | 0.07 | lasso | 8 | 0.11 | 3.6e-09 | 11.6 | -17.5 | 6.8e-69 | -0.52 | 0.99 | 0.01 | FALSE |
80 | GTEx | Skin Sun Exposed Lower leg | MAPK12 | 0.14 | 0.09 | lasso | 2 | 0.05 | 4.6e-05 | 5.4 | 5.3 | 9.4e-08 | 0.04 | 0.97 | 0.00 | FALSE |
81 | GTEx | Skin Sun Exposed Lower leg | CPT1B | 0.13 | 0.05 | enet | 20 | 0.10 | 1.6e-08 | 8.0 | -15.4 | 1.3e-53 | -0.47 | 0.94 | 0.02 | TRUE |
82 | GTEx | Small Intestine Terminal Ileum | CPT1B | 0.37 | 0.16 | enet | 15 | 0.24 | 3.7e-06 | -15.7 | -16.8 | 1.1e-63 | -0.49 | 0.05 | 0.57 | FALSE |
83 | GTEx | Spleen | CHKB | 0.24 | 0.11 | lasso | 6 | 0.09 | 2.2e-03 | 7.5 | -8.3 | 1.4e-16 | -0.26 | 0.06 | 0.09 | FALSE |
84 | GTEx | Spleen | CPT1B | 0.22 | 0.18 | enet | 10 | 0.07 | 8.2e-03 | -16.1 | -16.7 | 6.3e-63 | -0.42 | 0.05 | 0.57 | FALSE |
85 | GTEx | Stomach | CHKB | 0.28 | 0.04 | lasso | 7 | 0.10 | 2.4e-05 | -16.2 | -13.4 | 5.1e-41 | -0.38 | 0.51 | 0.08 | FALSE |
86 | GTEx | Stomach | MAPK12 | 0.33 | 0.22 | lasso | 4 | 0.20 | 8.6e-10 | 5.7 | 5.7 | 1.4e-08 | 0.06 | 1.00 | 0.00 | FALSE |
87 | GTEx | Thyroid | CHKB | 0.23 | 0.10 | lasso | 8 | 0.11 | 1.6e-08 | 11.6 | -9.0 | 3.3e-19 | -0.23 | 1.00 | 0.00 | FALSE |
88 | GTEx | Thyroid | MAPK12 | 0.30 | 0.23 | lasso | 5 | 0.23 | 1.7e-17 | 5.3 | 5.7 | 1.1e-08 | 0.06 | 1.00 | 0.00 | FALSE |
89 | GTEx | Thyroid | CPT1B | 0.20 | 0.16 | lasso | 7 | 0.15 | 1.5e-11 | 7.2 | -8.3 | 7.6e-17 | -0.23 | 1.00 | 0.00 | TRUE |
90 | GTEx | Vagina | TYMP | 0.26 | -0.01 | lasso | 4 | 0.01 | 1.8e-01 | -3.9 | -11.1 | 1.7e-28 | -0.24 | 0.04 | 0.12 | FALSE |
91 | GTEx | Vagina | SCO2 | 0.36 | -0.01 | lasso | 5 | -0.01 | 6.8e-01 | -4.7 | -5.3 | 8.9e-08 | -0.18 | 0.04 | 0.06 | FALSE |
92 | GTEx | Vagina | CTA-384D8.36 | 0.41 | 0.01 | lasso | 8 | 0.03 | 7.4e-02 | -4.7 | -6.2 | 4.5e-10 | -0.16 | 0.04 | 0.06 | TRUE |
93 | GTEx | Whole Blood | TYMP | 0.09 | 0.08 | lasso | 4 | 0.07 | 1.2e-06 | 22.9 | -23.7 | 2.2e-124 | -0.86 | 0.24 | 0.75 | FALSE |
94 | GTEx | Whole Blood | SCO2 | 0.12 | 0.05 | lasso | 3 | 0.07 | 1.1e-06 | 16.6 | 10.8 | 5.4e-27 | 0.40 | 0.65 | 0.04 | FALSE |
95 | GTEx | Whole Blood | CPT1B | 0.07 | 0.05 | lasso | 4 | 0.06 | 4.4e-06 | 7.2 | -11.3 | 1.2e-29 | -0.29 | 0.58 | 0.16 | FALSE |
96 | METSIM | Adipose | CHKB | 0.14 | 0.05 | bslmm | 287 | 0.13 | 3.4e-19 | -16.4 | -12.2 | 4.0e-34 | -0.29 | 0.90 | 0.10 | FALSE |
97 | METSIM | Adipose | CPT1B | 0.19 | 0.12 | blup | 293 | 0.16 | 1.1e-22 | 7.2 | -14.4 | 3.5e-47 | -0.42 | 1.00 | 0.00 | FALSE |
98 | METSIM | Adipose | ODF3B | 0.09 | 0.07 | lasso | 5 | 0.06 | 6.4e-10 | 24.9 | -23.3 | 1.7e-120 | -0.92 | 0.00 | 1.00 | FALSE |
99 | METSIM | Adipose | SCO2 | 0.10 | 0.06 | enet | 9 | 0.06 | 2.1e-09 | 19.7 | 11.6 | 4.7e-31 | 0.43 | 1.00 | 0.00 | FALSE |
100 | METSIM | Adipose | TYMP | 0.17 | 0.13 | lasso | 4 | 0.17 | 2.4e-24 | 19.7 | -23.9 | 6.2e-126 | -0.93 | 0.00 | 1.00 | FALSE |
101 | NTR | Blood | CHKB-CPT1B | 0.06 | 0.04 | bslmm | 296 | 0.05 | 1.7e-14 | 7.2 | -10.2 | 2.1e-24 | -0.28 | 1.00 | 0.00 | FALSE |
102 | NTR | Blood | SCO2 | 0.04 | 0.02 | enet | 20 | 0.02 | 1.4e-07 | 19.7 | 17.2 | 3.5e-66 | 0.57 | 1.00 | 0.00 | FALSE |
103 | YFS | Blood | CPT1B | 0.34 | 0.23 | enet | 62 | 0.34 | 7.7e-116 | 7.2 | -14.6 | 5.1e-48 | -0.39 | 1.00 | 0.00 | FALSE |
104 | YFS | Blood | HDAC10 | 0.13 | 0.08 | lasso | 9 | 0.09 | 1.8e-28 | 5.7 | 5.8 | 6.6e-09 | 0.07 | 1.00 | 0.00 | FALSE |
105 | YFS | Blood | LMF2 | 0.02 | 0.01 | bslmm | 298 | 0.01 | 7.9e-05 | 16.0 | -12.1 | 8.5e-34 | -0.41 | 0.13 | 0.05 | FALSE |
106 | YFS | Blood | ODF3B | 0.05 | 0.03 | enet | 8 | 0.04 | 1.5e-13 | 11.0 | -15.8 | 1.7e-56 | -0.67 | 0.30 | 0.70 | FALSE |
107 | YFS | Blood | SCO2 | 0.46 | 0.30 | enet | 52 | 0.41 | 3.0e-146 | 19.7 | 11.1 | 1.9e-28 | 0.39 | 1.00 | 0.00 | FALSE |
108 | YFS | Blood | TYMP | 0.40 | 0.38 | lasso | 9 | 0.42 | 3.0e-151 | 24.9 | -25.4 | 6.0e-142 | -0.95 | 0.00 | 1.00 | TRUE |
109 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | LOC100144603 | 0.14 | 0.09 | lasso | 3 | 0.08 | 1.9e-07 | 11.6 | 10.2 | 1.9e-24 | 0.24 | 0.92 | 0.05 | FALSE |
110 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | TYMP | 0.08 | 0.01 | blup | 53 | 0.04 | 2.8e-04 | 19.7 | -17.4 | 4.5e-68 | -0.67 | 0.05 | 0.27 | FALSE |
111 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C22orf34 | 0.23 | 0.37 | enet | 15 | 0.38 | 3.3e-84 | -4.7 | -5.1 | 2.9e-07 | 0.10 | 0.01 | 0.98 | FALSE |
112 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CHKB | 0.02 | 0.00 | enet | 5 | 0.01 | 1.3e-02 | 12.1 | -7.6 | 3.7e-14 | -0.21 | 0.04 | 0.02 | FALSE |
113 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CPT1B | 0.05 | 0.00 | enet | 11 | 0.02 | 8.7e-05 | 16.6 | -13.9 | 1.3e-43 | -0.34 | 0.04 | 0.11 | FALSE |
114 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC100144603 | 0.14 | 0.08 | enet | 23 | 0.11 | 1.1e-21 | 11.6 | 5.9 | 3.4e-09 | 0.03 | 1.00 | 0.00 | FALSE |
115 | The Cancer Genome Atlas | Breast Invasive Carcinoma | NCAPH2 | 0.01 | 0.01 | blup | 57 | 0.01 | 2.3e-02 | 7.5 | 15.4 | 1.8e-53 | 0.43 | 0.04 | 0.06 | FALSE |
116 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ODF3B | 0.03 | 0.01 | lasso | 4 | 0.02 | 5.7e-05 | 16.6 | -14.7 | 6.8e-49 | -0.51 | 0.52 | 0.03 | FALSE |
117 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SCO2 | 0.07 | 0.08 | lasso | 2 | 0.08 | 1.9e-16 | 23.0 | 23.0 | 4.1e-117 | 0.86 | 0.99 | 0.01 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TYMP | 0.08 | 0.05 | blup | 54 | 0.08 | 1.0e-15 | 16.6 | -16.8 | 1.7e-63 | -0.52 | 1.00 | 0.00 | FALSE |
119 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | C22orf41 | 0.21 | 0.00 | blup | 57 | 0.07 | 3.5e-04 | 6.8 | -10.3 | 6.7e-25 | -0.43 | 0.03 | 0.18 | FALSE |
120 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | LOC100144603 | 0.13 | 0.11 | lasso | 2 | 0.11 | 5.0e-06 | 11.6 | 12.1 | 8.5e-34 | 0.28 | 0.21 | 0.72 | FALSE |
121 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TYMP | 0.12 | 0.04 | blup | 54 | 0.09 | 3.1e-05 | 24.9 | -25.3 | 7.1e-141 | -0.82 | 0.00 | 0.95 | FALSE |
122 | The Cancer Genome Atlas | Colon Adenocarcinoma | LOC100144603 | 0.11 | 0.12 | lasso | 1 | 0.10 | 1.5e-06 | 11.6 | 11.6 | 5.2e-31 | 0.27 | 0.91 | 0.04 | FALSE |
123 | The Cancer Genome Atlas | Colon Adenocarcinoma | SCO2 | 0.05 | 0.07 | lasso | 2 | 0.05 | 4.1e-04 | 22.9 | 22.6 | 6.5e-113 | 0.83 | 0.06 | 0.60 | FALSE |
124 | The Cancer Genome Atlas | Colon Adenocarcinoma | TYMP | 0.17 | 0.12 | lasso | 3 | 0.12 | 3.8e-07 | 24.9 | -24.7 | 2.0e-134 | -0.96 | 0.00 | 1.00 | FALSE |
125 | The Cancer Genome Atlas | Esophageal Carcinoma | LOC100144603 | 0.18 | 0.19 | lasso | 3 | 0.15 | 1.5e-05 | 12.1 | 12.3 | 1.7e-34 | 0.28 | 0.14 | 0.47 | FALSE |
126 | The Cancer Genome Atlas | Glioblastoma Multiforme | ODF3B | 0.16 | -0.01 | blup | 53 | 0.07 | 4.6e-03 | 23.0 | -17.7 | 5.0e-70 | -0.62 | 0.01 | 0.56 | FALSE |
127 | The Cancer Genome Atlas | Glioblastoma Multiforme | TYMP | 0.29 | 0.24 | lasso | 4 | 0.23 | 1.1e-07 | 24.9 | -25.1 | 8.7e-139 | -0.97 | 0.00 | 1.00 | FALSE |
128 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C22orf41 | 0.16 | 0.00 | blup | 57 | 0.03 | 3.0e-04 | 14.0 | -11.0 | 2.8e-28 | -0.52 | 0.01 | 0.21 | FALSE |
129 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | LOC100144603 | 0.16 | 0.16 | blup | 64 | 0.15 | 2.7e-16 | 11.6 | 8.9 | 8.0e-19 | 0.20 | 1.00 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | TYMP | 0.16 | 0.09 | lasso | 3 | 0.12 | 6.5e-13 | 12.5 | -18.5 | 8.9e-77 | -0.71 | 0.98 | 0.02 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C22orf41 | 0.50 | 0.00 | enet | 37 | 0.20 | 2.9e-22 | 4.4 | -6.3 | 3.2e-10 | -0.34 | 0.04 | 0.78 | FALSE |
132 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CHKB-CPT1B | 0.03 | 0.01 | enet | 4 | 0.02 | 5.9e-03 | 14.0 | -11.4 | 4.5e-30 | -0.32 | 0.10 | 0.04 | FALSE |
133 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CPT1B | 0.04 | 0.01 | enet | 9 | 0.03 | 4.7e-04 | -12.6 | -16.6 | 1.5e-61 | -0.47 | 0.21 | 0.20 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MAPK8IP2 | 0.07 | 0.02 | blup | 63 | 0.03 | 8.9e-05 | 6.8 | -9.3 | 1.3e-20 | -0.26 | 0.28 | 0.12 | FALSE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ODF3B | 0.03 | 0.03 | lasso | 2 | 0.01 | 9.0e-03 | 16.6 | -17.1 | 1.5e-65 | -0.63 | 0.05 | 0.29 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TYMP | 0.13 | 0.06 | enet | 8 | 0.12 | 2.2e-13 | 16.6 | -22.9 | 8.9e-116 | -0.84 | 0.03 | 0.97 | FALSE |
137 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CHKB-CPT1B | 0.06 | 0.01 | blup | 69 | 0.02 | 2.2e-03 | 10.8 | -20.3 | 8.5e-92 | -0.63 | 0.01 | 0.35 | FALSE |
138 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CPT1B | 0.17 | 0.06 | enet | 24 | 0.13 | 6.5e-15 | 8.0 | -15.8 | 2.9e-56 | -0.43 | 0.91 | 0.09 | FALSE |
139 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC100144603 | 0.22 | 0.14 | lasso | 6 | 0.15 | 4.7e-17 | 12.1 | 8.8 | 9.8e-19 | 0.19 | 1.00 | 0.00 | FALSE |
140 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MAPK12 | 0.05 | 0.07 | lasso | 2 | 0.07 | 3.4e-08 | 5.3 | 5.5 | 4.3e-08 | 0.06 | 0.29 | 0.70 | FALSE |
141 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TYMP | 0.13 | 0.06 | enet | 14 | 0.09 | 5.9e-10 | 19.7 | -21.5 | 3.7e-102 | -0.85 | 0.00 | 1.00 | FALSE |
142 | The Cancer Genome Atlas | Lung Adenocarcinoma | CHKB-CPT1B | 0.05 | 0.00 | blup | 69 | 0.02 | 5.3e-03 | 16.6 | -19.8 | 1.4e-87 | -0.61 | 0.02 | 0.26 | FALSE |
143 | The Cancer Genome Atlas | Lung Adenocarcinoma | CPT1B | 0.06 | 0.02 | blup | 67 | 0.03 | 1.1e-04 | -16.2 | -17.4 | 7.7e-68 | -0.50 | 0.24 | 0.16 | TRUE |
144 | The Cancer Genome Atlas | Lung Adenocarcinoma | LOC100144603 | 0.14 | 0.08 | lasso | 2 | 0.08 | 3.1e-09 | 12.1 | 12.5 | 9.0e-36 | 0.29 | 0.77 | 0.23 | FALSE |
145 | The Cancer Genome Atlas | Lung Adenocarcinoma | ODF3B | 0.04 | 0.02 | enet | 1 | 0.01 | 2.2e-02 | 19.7 | -19.7 | 1.4e-86 | -0.75 | 0.08 | 0.36 | FALSE |
146 | The Cancer Genome Atlas | Lung Adenocarcinoma | SCO2 | 0.03 | 0.01 | blup | 50 | 0.01 | 8.8e-03 | 24.9 | 22.2 | 2.7e-109 | 0.79 | 0.00 | 0.98 | FALSE |
147 | The Cancer Genome Atlas | Lung Adenocarcinoma | TYMP | 0.13 | 0.10 | enet | 15 | 0.12 | 2.5e-13 | 19.7 | -19.7 | 8.5e-87 | -0.69 | 1.00 | 0.00 | FALSE |
148 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C22orf34 | 0.20 | 0.26 | lasso | 7 | 0.28 | 1.5e-32 | -4.7 | -5.1 | 2.7e-07 | 0.10 | 0.01 | 0.98 | FALSE |
149 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C22orf41 | 0.16 | 0.00 | blup | 57 | 0.04 | 3.8e-05 | 6.7 | -5.2 | 1.8e-07 | -0.31 | 0.01 | 0.05 | FALSE |
150 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CPT1B | 0.14 | 0.01 | enet | 20 | 0.07 | 1.3e-08 | 7.2 | -6.7 | 2.4e-11 | -0.05 | 0.07 | 0.03 | TRUE |
151 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LOC100144603 | 0.08 | 0.10 | enet | 5 | 0.10 | 1.4e-11 | 12.1 | 13.0 | 1.5e-38 | 0.31 | 1.00 | 0.00 | FALSE |
152 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | NCAPH2 | 0.06 | 0.01 | enet | 12 | 0.03 | 9.2e-05 | 11.0 | 12.8 | 3.0e-37 | 0.36 | 0.02 | 0.22 | FALSE |
153 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SCO2 | 0.08 | 0.08 | lasso | 3 | 0.07 | 7.7e-09 | 24.9 | 25.0 | 1.2e-137 | 1.00 | 0.00 | 1.00 | FALSE |
154 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SCO2 | 0.06 | 0.01 | blup | 50 | 0.01 | 3.6e-02 | 15.2 | 19.7 | 1.2e-86 | 0.74 | 0.02 | 0.27 | FALSE |
155 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TYMP | 0.17 | 0.12 | enet | 4 | 0.14 | 2.2e-09 | 16.6 | -21.6 | 7.5e-104 | -0.83 | 0.05 | 0.95 | FALSE |
156 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | LOC100144603 | 0.26 | 0.19 | lasso | 2 | 0.17 | 1.6e-07 | 11.6 | 9.8 | 1.3e-22 | 0.24 | 0.47 | 0.49 | FALSE |
157 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | SCO2 | 0.19 | 0.11 | enet | 12 | 0.14 | 1.1e-06 | 19.7 | 21.8 | 2.4e-105 | 0.77 | 0.10 | 0.80 | FALSE |
158 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | LOC100144603 | 0.32 | 0.13 | blup | 64 | 0.12 | 2.1e-05 | 11.6 | 5.5 | 4.3e-08 | 0.20 | 0.13 | 0.47 | FALSE |
159 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TYMP | 0.16 | 0.09 | lasso | 5 | 0.09 | 2.4e-04 | 19.7 | -19.3 | 3.2e-83 | -0.67 | 0.02 | 0.40 | FALSE |
160 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C22orf34 | 0.33 | 0.30 | enet | 31 | 0.34 | 5.0e-36 | -4.5 | -5.2 | 2.3e-07 | 0.07 | 0.02 | 0.96 | TRUE |
161 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C22orf41 | 0.26 | 0.00 | blup | 57 | 0.09 | 1.8e-09 | 6.7 | -7.2 | 6.3e-13 | -0.44 | 0.00 | 0.79 | FALSE |
162 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CHKB-CPT1B | 0.03 | 0.03 | lasso | 3 | 0.03 | 7.4e-04 | 11.6 | -14.6 | 1.9e-48 | -0.37 | 0.14 | 0.15 | FALSE |
163 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CPT1B | 0.06 | 0.04 | blup | 67 | 0.05 | 5.4e-06 | -16.1 | -16.4 | 1.7e-60 | -0.47 | 0.54 | 0.25 | FALSE |
164 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LOC100144603 | 0.17 | 0.15 | blup | 64 | 0.15 | 1.1e-15 | 12.1 | 5.2 | 1.9e-07 | 0.05 | 1.00 | 0.00 | FALSE |
165 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NCAPH2 | 0.07 | 0.03 | enet | 9 | 0.04 | 5.2e-05 | 11.0 | 12.9 | 6.1e-38 | 0.45 | 0.14 | 0.26 | FALSE |
166 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SCO2 | 0.13 | 0.11 | lasso | 7 | 0.13 | 3.4e-13 | 19.7 | 24.5 | 3.0e-132 | 0.86 | 0.18 | 0.82 | FALSE |
167 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TYMP | 0.04 | 0.00 | blup | 54 | 0.00 | 1.2e-01 | 11.6 | -9.8 | 1.4e-22 | -0.33 | 0.02 | 0.06 | FALSE |
168 | The Cancer Genome Atlas | Rectum Adenocarcinoma | LOC100144603 | 0.36 | 0.05 | lasso | 3 | 0.13 | 5.3e-04 | 3.1 | 6.3 | 2.4e-10 | 0.16 | 0.01 | 0.07 | FALSE |
169 | The Cancer Genome Atlas | Soft Tissue Sarcoma | TRABD | 0.10 | 0.01 | blup | 51 | 0.01 | 4.5e-02 | 5.0 | -5.2 | 2.3e-07 | -0.12 | 0.04 | 0.17 | FALSE |
170 | The Cancer Genome Atlas | Soft Tissue Sarcoma | TYMP | 0.24 | 0.10 | lasso | 5 | 0.08 | 1.1e-05 | 19.7 | -19.0 | 1.1e-80 | -0.71 | 0.01 | 0.96 | FALSE |
171 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | LOC100144603 | 0.31 | 0.19 | lasso | 8 | 0.14 | 1.6e-04 | 11.6 | 12.9 | 3.7e-38 | 0.34 | 0.02 | 0.86 | TRUE |
172 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LOC100144603 | 0.07 | 0.07 | lasso | 4 | 0.05 | 2.4e-04 | 12.1 | 10.3 | 6.7e-25 | 0.22 | 0.36 | 0.24 | FALSE |
173 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SCO2 | 0.07 | 0.02 | lasso | 5 | 0.03 | 3.1e-03 | 19.7 | 22.0 | 2.8e-107 | 0.84 | 0.02 | 0.72 | FALSE |
174 | The Cancer Genome Atlas | Stomach Adenocarcinoma | TYMP | 0.14 | 0.04 | blup | 54 | 0.06 | 2.1e-05 | 19.7 | -21.5 | 1.8e-102 | -0.69 | 0.00 | 0.99 | FALSE |
175 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ODF3B | 0.13 | 0.09 | lasso | 5 | 0.05 | 8.4e-03 | 12.5 | -12.9 | 8.5e-38 | -0.53 | 0.02 | 0.26 | FALSE |
176 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | TYMP | 0.39 | 0.22 | lasso | 5 | 0.22 | 2.6e-08 | 19.7 | -21.2 | 4.3e-100 | -0.82 | 0.01 | 0.99 | FALSE |
177 | The Cancer Genome Atlas | Thyroid Carcinoma | C22orf41 | 0.44 | 0.03 | blup | 57 | 0.25 | 8.3e-24 | 4.4 | -9.0 | 1.9e-19 | -0.46 | 0.39 | 0.54 | FALSE |
178 | The Cancer Genome Atlas | Thyroid Carcinoma | CHKB-CPT1B | 0.03 | 0.00 | blup | 69 | 0.01 | 4.5e-02 | -16.4 | -14.0 | 1.4e-44 | -0.38 | 0.03 | 0.04 | FALSE |
179 | The Cancer Genome Atlas | Thyroid Carcinoma | CPT1B | 0.13 | 0.07 | enet | 15 | 0.12 | 7.4e-12 | 7.2 | -13.5 | 9.6e-42 | -0.36 | 1.00 | 0.00 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | LOC100144603 | 0.14 | 0.09 | enet | 11 | 0.09 | 1.9e-09 | 12.1 | 5.3 | 1.4e-07 | 0.08 | 0.99 | 0.01 | FALSE |
181 | The Cancer Genome Atlas | Thyroid Carcinoma | SCO2 | 0.10 | 0.11 | lasso | 4 | 0.11 | 1.8e-10 | 19.7 | 22.6 | 2.7e-113 | 0.84 | 0.35 | 0.65 | FALSE |
182 | The Cancer Genome Atlas | Thyroid Carcinoma | TYMP | 0.05 | 0.05 | lasso | 1 | 0.04 | 5.0e-05 | 24.9 | -24.9 | 1.0e-136 | -1.00 | 0.00 | 1.00 | FALSE |