[Hub]/) : Traits : Forced vital capacity (FVC), Best measure :

chr20:31,382,860-34,737,037

Best TWAS P=2.22e-13 · Best GWAS P=1.21e-12 conditioned to 0.384

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex E2F1 0.06 0.01 bslmm 268 0.02 1.6e-03 -6.2 6.0 2.3e-09 0.06 0.04 0.75 FALSE
2 CommonMind Brain Pre-frontal Cortex UQCC 0.07 0.04 lasso 2 0.05 1.4e-06 5.1 -5.3 1.1e-07 -0.88 0.15 0.85 FALSE
3 GTEx Adipose Subcutaneous UQCC1 0.09 0.12 lasso 2 0.11 4.5e-09 5.5 -5.5 3.9e-08 -0.90 0.92 0.08 FALSE
4 GTEx Adrenal Gland MMP24-AS1 0.18 0.04 enet 10 0.13 2.2e-05 4.3 -5.2 1.8e-07 -0.74 0.22 0.21 FALSE
5 GTEx Artery Tibial TP53INP2 0.09 0.08 lasso 1 0.07 5.6e-06 5.7 5.7 1.2e-08 0.06 0.01 0.98 TRUE
6 GTEx Artery Tibial GSS 0.06 0.02 enet 25 0.04 7.7e-04 5.7 6.5 7.1e-11 0.35 0.29 0.09 FALSE
7 GTEx Brain Hippocampus E2F1 0.39 0.25 lasso 8 0.18 4.1e-05 -6.6 6.2 5.4e-10 -0.01 0.02 0.96 FALSE
8 GTEx Brain Hypothalamus E2F1 0.26 0.02 lasso 5 0.12 9.1e-04 3.2 6.3 2.8e-10 0.06 0.03 0.59 FALSE
9 GTEx Brain Putamen basal ganglia E2F1 0.18 0.22 lasso 6 0.21 1.2e-05 -6.6 6.5 9.1e-11 0.01 0.03 0.95 TRUE
10 GTEx Breast Mammary Tissue (Male) UQCC1 0.06 0.04 lasso 1 0.02 1.4e-01 5.7 -5.7 1.2e-08 -0.90 0.04 0.13 FALSE
11 GTEx Cells Transformed fibroblasts UQCC1 0.23 0.24 lasso 8 0.25 9.4e-19 5.5 -5.2 1.9e-07 -0.88 0.97 0.03 FALSE
12 GTEx Esophagus Mucosa UQCC1 0.13 0.10 enet 10 0.07 1.1e-05 5.7 -5.6 2.3e-08 -0.89 0.44 0.55 FALSE
13 GTEx Lung UQCC1 0.13 0.08 lasso 5 0.06 1.0e-05 5.5 -5.4 6.1e-08 -0.90 0.45 0.55 FALSE
14 GTEx Nerve Tibial UQCC1 0.07 0.04 enet 6 0.03 2.7e-03 5.5 -5.2 1.6e-07 -0.88 0.23 0.74 FALSE
15 GTEx Skin Sun Exposed Lower leg UQCC1 0.19 0.13 enet 16 0.10 8.1e-09 5.5 -5.3 8.6e-08 -0.84 0.96 0.04 FALSE
16 GTEx Stomach UQCC1 0.09 0.14 lasso 2 0.15 1.9e-07 5.5 -5.5 3.8e-08 -0.86 0.45 0.40 FALSE
17 GTEx Testis CBFA2T2 0.10 0.07 enet 11 0.07 6.1e-04 -6.2 6.2 7.1e-10 -0.02 0.08 0.85 FALSE
18 GTEx Thyroid CBFA2T2 0.11 0.05 enet 18 0.06 2.6e-05 3.3 5.3 1.3e-07 -0.02 0.13 0.84 FALSE
19 METSIM Adipose UQCC1 0.09 0.04 enet 18 0.05 1.5e-07 5.5 -5.5 4.1e-08 -0.90 0.14 0.86 FALSE
20 NTR Blood UQCC 0.01 0.01 enet 6 0.00 1.6e-02 5.5 -6.0 2.0e-09 -0.89 0.08 0.78 FALSE
21 ROSMAP Brain Pre-frontal Cortex UQCC1 0.05 0.05 lasso 5 0.06 1.7e-08 5.6 -6.0 1.6e-09 -0.84 0.21 0.79 FALSE
22 ROSMAP Brain Pre-frontal Cortex GDF5 0.10 0.13 lasso 2 0.12 2.9e-15 5.5 5.5 3.8e-08 0.90 0.80 0.20 FALSE
23 YFS Blood EIF6 0.02 0.00 blup 341 0.01 4.1e-05 4.9 5.1 3.0e-07 0.37 0.88 0.02 FALSE
24 YFS Blood UQCC 0.21 0.19 lasso 26 0.20 6.4e-64 5.5 -5.6 2.5e-08 -0.88 0.96 0.04 FALSE
25 The Cancer Genome Atlas Bladder Urothelial Carcinoma UQCC 0.03 0.04 blup 67 0.03 2.6e-03 5.5 -5.9 4.2e-09 -0.91 0.02 0.91 FALSE
26 The Cancer Genome Atlas Breast Invasive Carcinoma GGT7 0.02 0.02 lasso 3 0.02 2.2e-04 5.7 -5.4 7.4e-08 -0.09 0.02 0.88 FALSE
27 The Cancer Genome Atlas Colon Adenocarcinoma CBFA2T2 0.13 0.04 lasso 1 0.03 1.1e-02 -6.4 6.4 1.6e-10 0.01 0.01 0.68 FALSE
28 The Cancer Genome Atlas Glioblastoma Multiforme UQCC 0.15 0.02 blup 67 0.04 2.0e-02 2.2 -5.6 2.5e-08 -0.74 0.02 0.64 FALSE
29 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma CEP250 0.02 0.01 blup 43 0.02 8.0e-04 4.6 5.6 2.6e-08 0.79 0.03 0.83 FALSE
30 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma TRPC4AP 0.05 0.03 enet 10 0.04 7.1e-05 -4.0 5.3 1.0e-07 -0.07 0.04 0.81 FALSE
31 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma UQCC 0.05 0.06 blup 66 0.06 3.6e-07 4.4 -5.4 6.9e-08 -0.87 0.13 0.87 FALSE
32 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CEP250 0.03 0.01 blup 43 0.03 2.6e-04 7.1 5.5 4.6e-08 0.77 0.01 0.89 FALSE
33 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma UQCC 0.09 0.10 blup 67 0.10 7.2e-11 5.4 -5.3 1.1e-07 -0.88 0.94 0.06 FALSE
34 The Cancer Genome Atlas Brain Lower Grade Glioma CBFA2T2 0.02 0.01 blup 31 0.01 1.8e-02 -6.3 5.6 1.8e-08 0.02 0.01 0.70 FALSE
35 The Cancer Genome Atlas Brain Lower Grade Glioma GDF5 0.09 0.11 blup 76 0.12 1.0e-13 5.4 5.3 1.4e-07 0.83 0.14 0.86 FALSE
36 The Cancer Genome Atlas Brain Lower Grade Glioma UQCC 0.04 0.06 lasso 6 0.05 2.3e-06 5.5 -5.5 3.5e-08 -0.90 0.64 0.36 FALSE
37 The Cancer Genome Atlas Lung Adenocarcinoma UQCC 0.10 0.07 enet 10 0.07 1.5e-08 5.6 -5.2 1.6e-07 -0.89 0.09 0.91 FALSE
38 The Cancer Genome Atlas Lung Squamous Cell Carcinoma MMP24 0.04 0.04 blup 62 0.02 7.4e-04 4.4 -5.2 2.4e-07 -0.55 0.17 0.74 FALSE
39 The Cancer Genome Atlas Lung Squamous Cell Carcinoma UQCC 0.07 0.08 blup 67 0.07 1.1e-08 5.4 -5.9 3.9e-09 -0.82 0.05 0.95 FALSE
40 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma GDF5 0.05 0.02 blup 76 0.04 1.4e-03 5.5 5.9 4.2e-09 0.89 0.03 0.91 FALSE
41 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma UQCC 0.22 0.21 lasso 7 0.18 1.9e-07 5.3 -5.6 2.0e-08 -0.84 0.31 0.69 FALSE
42 The Cancer Genome Atlas Prostate Adenocarcinoma GDF5 0.05 0.05 lasso 5 0.04 7.2e-05 7.1 6.7 1.5e-11 0.95 0.00 1.00 FALSE
43 The Cancer Genome Atlas Prostate Adenocarcinoma UQCC 0.07 0.10 lasso 8 0.11 1.3e-11 5.4 -5.6 2.3e-08 -0.90 0.36 0.64 FALSE
44 The Cancer Genome Atlas Soft Tissue Sarcoma UQCC 0.07 0.06 blup 66 0.07 5.2e-05 5.5 -5.8 8.3e-09 -0.89 0.02 0.97 FALSE
45 The Cancer Genome Atlas Stomach Adenocarcinoma GDF5 0.09 0.04 enet 13 0.05 2.4e-04 7.1 7.3 2.2e-13 0.85 0.00 0.99 TRUE
46 The Cancer Genome Atlas Thyroid Carcinoma CEP250 0.05 0.03 blup 43 0.04 5.8e-05 4.5 5.7 1.6e-08 0.78 0.12 0.83 FALSE
47 The Cancer Genome Atlas Thyroid Carcinoma GDF5 0.02 0.00 blup 76 0.00 1.9e-01 5.7 5.4 5.9e-08 0.90 0.02 0.88 FALSE
48 The Cancer Genome Atlas Thyroid Carcinoma UQCC 0.15 0.21 blup 67 0.22 1.2e-20 5.7 -5.8 6.4e-09 -0.88 0.49 0.51 FALSE