Best TWAS P=3.41e-27 · Best GWAS P=7.69e-22 conditioned to 0.206
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | BMP8A | 0.05 | 0.03 | lasso | 3 | 0.02 | 8.8e-04 | 8.42 | 8.7 | 4.3e-18 | 0.08 | 0.04 | 0.93 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | SF3A3 | 0.05 | 0.03 | lasso | 3 | 0.05 | 2.8e-06 | 5.66 | -5.1 | 3.0e-07 | 0.00 | 0.09 | 0.91 | FALSE |
3 | GTEx | Adipose Subcutaneous | PABPC4 | 0.15 | 0.04 | lasso | 8 | 0.04 | 3.3e-04 | 4.38 | -7.3 | 1.9e-13 | -0.07 | 0.03 | 0.97 | FALSE |
4 | GTEx | Adipose Subcutaneous | RP11-69E11.4 | 0.14 | 0.08 | enet | 22 | 0.10 | 1.4e-08 | 8.07 | 6.6 | 4.2e-11 | 0.07 | 0.97 | 0.03 | FALSE |
5 | GTEx | Adipose Subcutaneous | SF3A3 | 0.17 | 0.12 | lasso | 4 | 0.11 | 2.6e-09 | 5.34 | 5.4 | 8.4e-08 | -0.01 | 0.08 | 0.92 | FALSE |
6 | GTEx | Adipose Subcutaneous | BMP8A | 0.06 | 0.05 | lasso | 1 | 0.04 | 3.5e-04 | 6.89 | 6.9 | 5.7e-12 | 0.04 | 0.14 | 0.26 | FALSE |
7 | GTEx | Adipose Visceral Omentum | RP11-69E11.4 | 0.10 | 0.07 | lasso | 2 | 0.07 | 1.3e-04 | 6.95 | 6.1 | 8.7e-10 | 0.05 | 0.26 | 0.67 | FALSE |
8 | GTEx | Adipose Visceral Omentum | FHL3 | 0.10 | 0.02 | enet | 9 | 0.00 | 1.9e-01 | 5.63 | 5.9 | 3.7e-09 | -0.01 | 0.05 | 0.80 | FALSE |
9 | GTEx | Adipose Visceral Omentum | SF3A3 | 0.20 | 0.18 | lasso | 2 | 0.18 | 1.5e-09 | 5.66 | 5.5 | 3.0e-08 | -0.01 | 0.05 | 0.95 | FALSE |
10 | GTEx | Adrenal Gland | PABPC4 | 0.20 | 0.09 | lasso | 8 | 0.06 | 3.0e-03 | 8.07 | -9.6 | 1.2e-21 | -0.09 | 0.03 | 0.89 | FALSE |
11 | GTEx | Adrenal Gland | RP11-69E11.4 | 0.11 | 0.05 | lasso | 3 | 0.00 | 2.4e-01 | 6.89 | 8.2 | 2.1e-16 | 0.05 | 0.05 | 0.59 | FALSE |
12 | GTEx | Adrenal Gland | FHL3 | 0.24 | 0.15 | enet | 17 | 0.34 | 7.4e-13 | 5.34 | 6.5 | 1.1e-10 | 0.02 | 0.01 | 0.99 | FALSE |
13 | GTEx | Adrenal Gland | PPIEL | 0.29 | 0.01 | lasso | 3 | 0.00 | 2.9e-01 | -3.82 | 5.8 | 5.4e-09 | 0.04 | 0.04 | 0.10 | FALSE |
14 | GTEx | Artery Aorta | CTPS1 | 0.10 | 0.00 | enet | 8 | 0.00 | 4.6e-01 | 7.49 | 8.2 | 2.7e-16 | 0.75 | 0.06 | 0.51 | FALSE |
15 | GTEx | Artery Aorta | RP11-69E11.4 | 0.13 | 0.10 | enet | 14 | 0.14 | 2.5e-08 | 8.42 | 7.0 | 2.8e-12 | 0.06 | 0.54 | 0.45 | FALSE |
16 | GTEx | Artery Aorta | FHL3 | 0.35 | 0.22 | lasso | 4 | 0.27 | 3.9e-15 | 5.34 | 6.2 | 7.5e-10 | 0.00 | 0.01 | 0.99 | FALSE |
17 | GTEx | Artery Aorta | SF3A3 | 0.12 | 0.19 | lasso | 2 | 0.18 | 6.6e-10 | 5.34 | 5.4 | 7.5e-08 | -0.01 | 0.09 | 0.91 | FALSE |
18 | GTEx | Artery Aorta | INPP5B | 0.21 | 0.13 | lasso | 3 | 0.21 | 5.5e-12 | -3.68 | 5.2 | 1.8e-07 | -0.02 | 0.12 | 0.88 | FALSE |
19 | GTEx | Artery Coronary | TRIT1 | 0.20 | 0.09 | lasso | 6 | 0.10 | 3.0e-04 | -3.06 | 5.5 | 5.1e-08 | 0.00 | 0.09 | 0.11 | FALSE |
20 | GTEx | Artery Coronary | CTPS1 | 0.25 | -0.01 | enet | 23 | 0.00 | 3.0e-01 | 0.27 | 5.2 | 2.1e-07 | 0.39 | 0.07 | 0.14 | FALSE |
21 | GTEx | Artery Coronary | RP11-69E11.4 | 0.63 | -0.01 | lasso | 9 | 0.10 | 2.2e-04 | 6.68 | 5.8 | 6.6e-09 | 0.04 | 0.12 | 0.20 | FALSE |
22 | GTEx | Artery Coronary | FHL3 | 0.31 | 0.22 | lasso | 5 | 0.18 | 1.3e-06 | 5.34 | 5.6 | 2.0e-08 | -0.03 | 0.06 | 0.92 | FALSE |
23 | GTEx | Artery Coronary | INPP5B | 0.27 | 0.28 | enet | 5 | 0.18 | 1.4e-06 | 5.08 | 5.4 | 7.5e-08 | -0.01 | 0.05 | 0.95 | FALSE |
24 | GTEx | Artery Coronary | RP11-109P14.10 | 0.26 | 0.10 | enet | 10 | 0.00 | 3.7e-01 | 5.34 | 5.8 | 6.3e-09 | -0.01 | 0.02 | 0.96 | FALSE |
25 | GTEx | Artery Tibial | PABPC4 | 0.10 | 0.10 | lasso | 4 | 0.10 | 3.4e-08 | 8.07 | -8.0 | 1.4e-15 | -0.07 | 0.53 | 0.47 | FALSE |
26 | GTEx | Artery Tibial | RP11-69E11.4 | 0.15 | 0.16 | lasso | 6 | 0.16 | 8.3e-13 | 6.95 | 6.7 | 1.7e-11 | 0.05 | 1.00 | 0.00 | FALSE |
27 | GTEx | Artery Tibial | FHL3 | 0.13 | 0.11 | lasso | 2 | 0.13 | 1.1e-10 | 5.66 | 6.0 | 2.5e-09 | -0.01 | 0.03 | 0.97 | FALSE |
28 | GTEx | Artery Tibial | SF3A3 | 0.16 | 0.11 | enet | 8 | 0.12 | 1.2e-09 | 5.34 | 5.6 | 2.0e-08 | -0.02 | 0.07 | 0.93 | FALSE |
29 | GTEx | Artery Tibial | UTP11L | 0.09 | 0.14 | lasso | 3 | 0.12 | 1.1e-09 | 5.66 | 5.9 | 3.5e-09 | -0.01 | 0.03 | 0.97 | FALSE |
30 | GTEx | Artery Tibial | RP11-109P14.10 | 0.21 | 0.13 | lasso | 6 | 0.15 | 1.7e-11 | -4.47 | 5.1 | 2.9e-07 | 0.03 | 0.85 | 0.14 | FALSE |
31 | GTEx | Brain Cerebellar Hemisphere | RP11-69E11.4 | 0.22 | 0.08 | enet | 16 | 0.08 | 4.5e-03 | 6.95 | 6.8 | 9.4e-12 | 0.04 | 0.16 | 0.59 | FALSE |
32 | GTEx | Brain Cerebellum | HIVEP3 | 0.23 | 0.16 | lasso | 6 | 0.19 | 2.8e-06 | 4.80 | 5.2 | 1.8e-07 | 0.06 | 0.57 | 0.03 | TRUE |
33 | GTEx | Brain Frontal Cortex BA9 | RP11-69E11.4 | 0.23 | 0.10 | lasso | 6 | 0.11 | 7.2e-04 | 6.68 | 6.7 | 1.7e-11 | 0.03 | 0.13 | 0.20 | FALSE |
34 | GTEx | Brain Hypothalamus | RP11-69E11.4 | 0.23 | 0.12 | lasso | 6 | 0.20 | 1.5e-05 | 6.33 | 6.2 | 4.6e-10 | 0.05 | 0.14 | 0.55 | FALSE |
35 | GTEx | Breast Mammary Tissue | PABPC4 | 0.13 | 0.02 | enet | 14 | 0.04 | 3.4e-03 | 8.42 | -7.8 | 6.7e-15 | -0.06 | 0.06 | 0.86 | FALSE |
36 | GTEx | Breast Mammary Tissue | RP11-69E11.4 | 0.15 | 0.05 | enet | 32 | 0.05 | 8.8e-04 | 5.45 | 6.0 | 1.8e-09 | 0.02 | 0.27 | 0.69 | FALSE |
37 | GTEx | Breast Mammary Tissue | SF3A3 | 0.14 | 0.18 | lasso | 2 | 0.16 | 8.5e-09 | 5.34 | 5.5 | 4.2e-08 | 0.00 | 0.08 | 0.91 | FALSE |
38 | GTEx | Breast Mammary Tissue (Female) | PABPC4 | 0.10 | 0.00 | enet | 9 | 0.01 | 1.5e-01 | 9.15 | -8.7 | 3.5e-18 | -0.04 | 0.03 | 0.45 | FALSE |
39 | GTEx | Breast Mammary Tissue (Female) | CTPS1 | 0.12 | -0.01 | lasso | 4 | -0.01 | 7.5e-01 | 6.95 | 5.7 | 1.1e-08 | 0.61 | 0.04 | 0.09 | FALSE |
40 | GTEx | Breast Mammary Tissue (Female) | SF3A3 | 0.08 | 0.16 | lasso | 1 | 0.10 | 6.2e-04 | 5.34 | 5.3 | 9.2e-08 | 0.00 | 0.05 | 0.60 | FALSE |
41 | GTEx | Cells EBV-transformed lymphocytes | CTPS1 | 0.26 | 0.11 | lasso | 6 | 0.08 | 1.6e-03 | 8.24 | 8.0 | 1.7e-15 | 0.70 | 0.20 | 0.32 | FALSE |
42 | GTEx | Cells EBV-transformed lymphocytes | SF3A3 | 0.23 | 0.11 | enet | 18 | 0.09 | 5.8e-04 | 5.66 | 5.4 | 8.3e-08 | -0.03 | 0.02 | 0.93 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | PABPC4 | 0.07 | 0.09 | lasso | 1 | 0.06 | 2.7e-05 | 8.07 | -8.1 | 7.3e-16 | -0.08 | 0.08 | 0.90 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | RP11-69E11.4 | 0.15 | 0.08 | enet | 17 | 0.11 | 9.9e-09 | 3.24 | 5.6 | 1.9e-08 | 0.03 | 0.96 | 0.04 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | FHL3 | 0.24 | 0.17 | lasso | 4 | 0.15 | 1.4e-11 | 5.66 | 5.9 | 4.7e-09 | -0.02 | 0.03 | 0.97 | FALSE |
46 | GTEx | Colon Sigmoid | RP11-69E11.4 | 0.20 | 0.16 | lasso | 5 | 0.20 | 1.1e-07 | 5.70 | 6.2 | 4.1e-10 | 0.03 | 0.31 | 0.65 | FALSE |
47 | GTEx | Colon Transverse | RP11-69E11.4 | 0.23 | 0.12 | lasso | 4 | 0.15 | 1.8e-07 | 8.42 | 7.3 | 3.1e-13 | 0.07 | 0.15 | 0.84 | FALSE |
48 | GTEx | Esophagus Gastroesophageal Junction | SF3A3 | 0.23 | 0.11 | lasso | 6 | 0.08 | 7.7e-04 | 5.66 | 5.3 | 1.2e-07 | 0.01 | 0.04 | 0.92 | FALSE |
49 | GTEx | Esophagus Gastroesophageal Junction | BMP8A | 0.11 | 0.04 | lasso | 4 | 0.01 | 1.1e-01 | 5.29 | 5.3 | 1.3e-07 | 0.03 | 0.17 | 0.47 | FALSE |
50 | GTEx | Esophagus Mucosa | PABPC4 | 0.06 | 0.06 | lasso | 3 | 0.08 | 7.3e-06 | 8.42 | -8.4 | 4.0e-17 | -0.08 | 0.18 | 0.79 | FALSE |
51 | GTEx | Esophagus Mucosa | RP11-69E11.4 | 0.18 | 0.06 | lasso | 9 | 0.07 | 2.2e-05 | 6.95 | 7.8 | 4.5e-15 | 0.06 | 0.62 | 0.36 | FALSE |
52 | GTEx | Esophagus Mucosa | FHL3 | 0.14 | 0.14 | lasso | 5 | 0.12 | 3.4e-08 | 5.66 | 5.5 | 4.0e-08 | -0.03 | 0.04 | 0.96 | FALSE |
53 | GTEx | Esophagus Mucosa | SF3A3 | 0.08 | 0.06 | lasso | 4 | 0.05 | 1.5e-04 | 5.66 | 5.6 | 1.8e-08 | -0.02 | 0.05 | 0.94 | FALSE |
54 | GTEx | Esophagus Mucosa | BMP8A | 0.08 | 0.02 | lasso | 2 | 0.01 | 1.4e-01 | -3.82 | 7.9 | 2.5e-15 | 0.04 | 0.04 | 0.94 | FALSE |
55 | GTEx | Esophagus Mucosa | PPIEL | 0.11 | 0.02 | lasso | 3 | 0.02 | 9.4e-03 | 7.88 | 7.3 | 2.1e-13 | 0.05 | 0.08 | 0.76 | FALSE |
56 | GTEx | Esophagus Muscularis | RP11-69E11.4 | 0.11 | 0.14 | enet | 16 | 0.15 | 2.6e-09 | 3.85 | 5.7 | 1.5e-08 | 0.03 | 0.91 | 0.09 | FALSE |
57 | GTEx | Esophagus Muscularis | SF3A3 | 0.14 | 0.03 | enet | 13 | 0.06 | 2.9e-04 | 5.66 | 5.9 | 3.5e-09 | 0.00 | 0.04 | 0.90 | FALSE |
58 | GTEx | Esophagus Muscularis | BMP8A | 0.08 | 0.05 | enet | 10 | 0.05 | 3.5e-04 | 3.87 | 6.6 | 3.6e-11 | 0.04 | 0.15 | 0.80 | FALSE |
59 | GTEx | Esophagus Muscularis | RP11-109P14.10 | 0.17 | 0.11 | lasso | 6 | 0.13 | 3.6e-08 | -4.46 | 5.4 | 7.3e-08 | 0.00 | 0.24 | 0.76 | FALSE |
60 | GTEx | Heart Atrial Appendage | RP11-69E11.4 | 0.20 | 0.16 | lasso | 5 | 0.15 | 3.1e-07 | 6.68 | 5.2 | 2.3e-07 | 0.04 | 0.95 | 0.01 | FALSE |
61 | GTEx | Heart Atrial Appendage | SF3A3 | 0.15 | 0.12 | lasso | 4 | 0.08 | 1.4e-04 | 5.34 | 5.6 | 2.7e-08 | 0.00 | 0.06 | 0.85 | FALSE |
62 | GTEx | Heart Left Ventricle | RP11-69E11.4 | 0.10 | 0.10 | lasso | 4 | 0.08 | 3.8e-05 | 6.95 | 6.4 | 1.6e-10 | 0.05 | 0.44 | 0.34 | FALSE |
63 | GTEx | Lung | PABPC4 | 0.05 | 0.03 | lasso | 3 | 0.02 | 1.3e-02 | 8.07 | -7.4 | 1.4e-13 | -0.06 | 0.17 | 0.60 | FALSE |
64 | GTEx | Lung | CTPS1 | 0.06 | 0.04 | lasso | 3 | 0.04 | 2.4e-04 | 8.40 | 8.6 | 5.6e-18 | 0.77 | 0.21 | 0.64 | FALSE |
65 | GTEx | Lung | RP11-69E11.4 | 0.26 | 0.09 | lasso | 9 | 0.20 | 3.8e-15 | -3.82 | 7.3 | 2.5e-13 | 0.03 | 0.88 | 0.12 | FALSE |
66 | GTEx | Lung | FHL3 | 0.14 | 0.07 | enet | 24 | 0.13 | 6.0e-10 | 5.26 | 6.0 | 1.8e-09 | -0.05 | 0.02 | 0.98 | FALSE |
67 | GTEx | Lung | SF3A3 | 0.21 | 0.20 | lasso | 2 | 0.21 | 1.1e-15 | 5.66 | 5.5 | 2.9e-08 | -0.01 | 0.05 | 0.95 | FALSE |
68 | GTEx | Nerve Tibial | SCMH1 | 0.16 | 0.03 | enet | 24 | 0.07 | 1.6e-05 | 9.53 | -8.3 | 6.9e-17 | -0.70 | 0.02 | 0.98 | FALSE |
69 | GTEx | Nerve Tibial | PABPC4 | 0.17 | 0.08 | enet | 12 | 0.05 | 2.7e-04 | 8.07 | -7.6 | 2.3e-14 | -0.05 | 0.11 | 0.88 | FALSE |
70 | GTEx | Nerve Tibial | RP11-69E11.4 | 0.18 | 0.08 | lasso | 5 | 0.18 | 1.3e-12 | 6.32 | 7.6 | 3.3e-14 | 0.04 | 0.32 | 0.68 | FALSE |
71 | GTEx | Nerve Tibial | FHL3 | 0.20 | 0.12 | lasso | 7 | 0.14 | 1.9e-10 | 5.08 | 5.7 | 1.2e-08 | 0.00 | 0.02 | 0.98 | FALSE |
72 | GTEx | Nerve Tibial | SF3A3 | 0.35 | 0.36 | lasso | 4 | 0.35 | 7.6e-26 | 5.34 | 5.4 | 7.5e-08 | -0.01 | 0.15 | 0.85 | FALSE |
73 | GTEx | Nerve Tibial | RP11-69E11.8 | 0.05 | 0.00 | lasso | 3 | 0.01 | 6.9e-02 | 8.07 | -8.5 | 2.4e-17 | -0.08 | 0.04 | 0.84 | FALSE |
74 | GTEx | Ovary | RP11-69E11.4 | 0.25 | 0.05 | enet | 11 | 0.03 | 6.7e-02 | 6.33 | 7.8 | 8.2e-15 | 0.03 | 0.05 | 0.39 | FALSE |
75 | GTEx | Pancreas | RP11-69E11.4 | 0.19 | -0.01 | enet | 16 | 0.01 | 1.3e-01 | -3.04 | 6.5 | 9.9e-11 | 0.04 | 0.07 | 0.40 | FALSE |
76 | GTEx | Pancreas | FHL3 | 0.17 | 0.05 | lasso | 3 | 0.10 | 6.6e-05 | -6.09 | 6.5 | 6.4e-11 | -0.02 | 0.00 | 1.00 | TRUE |
77 | GTEx | Skin Not Sun Exposed Suprapubic | PABPC4 | 0.12 | 0.10 | lasso | 3 | 0.05 | 1.0e-03 | 8.42 | -8.4 | 2.8e-17 | -0.08 | 0.21 | 0.56 | FALSE |
78 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-69E11.4 | 0.16 | 0.18 | lasso | 3 | 0.15 | 1.0e-08 | 5.70 | 6.0 | 2.1e-09 | 0.01 | 0.98 | 0.02 | FALSE |
79 | GTEx | Skin Not Sun Exposed Suprapubic | FHL3 | 0.11 | 0.11 | lasso | 4 | 0.07 | 1.0e-04 | 5.57 | 5.9 | 3.6e-09 | -0.02 | 0.02 | 0.97 | FALSE |
80 | GTEx | Skin Not Sun Exposed Suprapubic | SF3A3 | 0.24 | 0.14 | lasso | 4 | 0.15 | 1.1e-08 | 5.34 | 5.4 | 5.9e-08 | -0.01 | 0.09 | 0.91 | FALSE |
81 | GTEx | Skin Sun Exposed Lower leg | PABPC4 | 0.11 | 0.09 | lasso | 7 | 0.08 | 2.7e-07 | 8.42 | -8.2 | 2.8e-16 | -0.07 | 0.17 | 0.83 | FALSE |
82 | GTEx | Skin Sun Exposed Lower leg | MACF1 | 0.08 | 0.08 | lasso | 2 | 0.06 | 5.3e-06 | 6.00 | -6.2 | 6.1e-10 | -0.02 | 0.69 | 0.30 | FALSE |
83 | GTEx | Skin Sun Exposed Lower leg | RP11-69E11.4 | 0.13 | 0.12 | lasso | 6 | 0.15 | 1.3e-12 | 8.03 | 8.4 | 3.4e-17 | 0.06 | 0.94 | 0.06 | FALSE |
84 | GTEx | Skin Sun Exposed Lower leg | FHL3 | 0.15 | 0.09 | lasso | 5 | 0.10 | 1.2e-08 | -6.09 | 6.3 | 2.8e-10 | 0.01 | 0.00 | 1.00 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | SF3A3 | 0.28 | 0.27 | enet | 29 | 0.28 | 3.2e-23 | 5.34 | 5.2 | 2.0e-07 | -0.02 | 0.16 | 0.84 | FALSE |
86 | GTEx | Spleen | RP11-69E11.4 | 0.25 | 0.12 | lasso | 4 | 0.15 | 9.3e-05 | 6.95 | 8.2 | 3.3e-16 | 0.06 | 0.14 | 0.70 | FALSE |
87 | GTEx | Spleen | BMP8A | 0.16 | 0.08 | lasso | 3 | 0.05 | 1.6e-02 | 8.03 | 7.4 | 1.6e-13 | 0.04 | 0.06 | 0.36 | FALSE |
88 | GTEx | Stomach | RP11-69E11.4 | 0.31 | 0.20 | lasso | 4 | 0.20 | 4.0e-10 | 6.95 | 7.7 | 1.9e-14 | 0.07 | 0.75 | 0.24 | FALSE |
89 | GTEx | Testis | SLFNL1 | 0.30 | 0.17 | lasso | 14 | 0.28 | 5.3e-13 | 9.45 | 6.4 | 1.2e-10 | 0.85 | 0.02 | 0.98 | FALSE |
90 | GTEx | Testis | CTPS1 | 0.57 | 0.28 | enet | 17 | 0.38 | 1.0e-17 | -3.22 | 5.1 | 3.0e-07 | 0.48 | 0.98 | 0.02 | FALSE |
91 | GTEx | Testis | BMP8A | 0.27 | 0.28 | lasso | 6 | 0.27 | 2.0e-12 | 3.87 | 5.6 | 2.7e-08 | 0.03 | 0.98 | 0.02 | FALSE |
92 | GTEx | Thyroid | PABPC4 | 0.08 | 0.03 | lasso | 6 | 0.05 | 1.3e-04 | 9.00 | -7.1 | 1.7e-12 | -0.06 | 0.04 | 0.95 | FALSE |
93 | GTEx | Thyroid | RP11-69E11.4 | 0.17 | 0.04 | lasso | 9 | 0.06 | 4.4e-05 | 6.95 | 7.1 | 9.6e-13 | 0.07 | 0.15 | 0.71 | FALSE |
94 | GTEx | Thyroid | SF3A3 | 0.13 | 0.16 | lasso | 2 | 0.16 | 1.7e-12 | 5.34 | 5.5 | 3.2e-08 | -0.01 | 0.06 | 0.94 | FALSE |
95 | GTEx | Whole Blood | SF3A3 | 0.16 | 0.08 | lasso | 4 | 0.09 | 2.3e-08 | 3.75 | 5.4 | 8.0e-08 | -0.05 | 0.51 | 0.47 | FALSE |
96 | METSIM | Adipose | FHL3 | 0.15 | 0.12 | lasso | 5 | 0.14 | 6.3e-20 | -6.09 | 5.9 | 4.4e-09 | -0.03 | 0.00 | 1.00 | FALSE |
97 | METSIM | Adipose | PABPC4 | 0.05 | 0.02 | lasso | 6 | 0.03 | 6.0e-05 | 8.42 | -7.4 | 1.9e-13 | -0.06 | 0.09 | 0.90 | FALSE |
98 | METSIM | Adipose | SF3A3 | 0.08 | 0.11 | lasso | 3 | 0.11 | 7.4e-16 | 5.66 | 5.7 | 1.5e-08 | -0.02 | 0.05 | 0.94 | FALSE |
99 | NTR | Blood | KIAA0754 | 0.03 | 0.00 | bslmm | 366 | 0.01 | 1.6e-03 | -1.26 | 8.0 | 1.7e-15 | 0.05 | 0.04 | 0.88 | FALSE |
100 | NTR | Blood | PABPC4 | 0.01 | 0.00 | blup | 383 | 0.00 | 2.8e-02 | 8.07 | -9.6 | 1.1e-21 | -0.05 | 0.04 | 0.60 | TRUE |
101 | NTR | Blood | SF3A3 | 0.10 | 0.12 | lasso | 6 | 0.13 | 7.2e-39 | -6.13 | -5.8 | 6.8e-09 | -0.01 | 0.00 | 1.00 | FALSE |
102 | ROSMAP | Brain Pre-frontal Cortex | CTPS1 | 0.04 | 0.04 | enet | 7 | 0.04 | 9.1e-06 | 6.89 | 5.3 | 1.2e-07 | 0.59 | 0.63 | 0.11 | FALSE |
103 | ROSMAP | Brain Pre-frontal Cortex | FHL3 | 0.07 | 0.06 | enet | 8 | 0.06 | 4.9e-08 | 5.08 | 5.3 | 1.0e-07 | -0.02 | 0.07 | 0.93 | FALSE |
104 | YFS | Blood | FHL3 | 0.69 | 0.49 | enet | 33 | 0.57 | 8.2e-237 | 3.75 | 5.8 | 7.1e-09 | -0.04 | 0.99 | 0.00 | FALSE |
105 | YFS | Blood | PABPC4 | 0.04 | 0.03 | enet | 44 | 0.03 | 3.2e-11 | 8.42 | -6.5 | 6.5e-11 | -0.04 | 0.73 | 0.27 | FALSE |
106 | YFS | Blood | SF3A3 | 0.50 | 0.29 | enet | 44 | 0.44 | 3.2e-162 | 5.66 | 6.1 | 9.9e-10 | -0.06 | 0.03 | 0.97 | FALSE |
107 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FHL3 | 0.08 | 0.02 | enet | 7 | 0.03 | 1.1e-03 | 5.34 | 5.6 | 1.9e-08 | -0.01 | 0.00 | 0.95 | FALSE |
108 | The Cancer Genome Atlas | Breast Invasive Carcinoma | BMP8A | 0.05 | 0.01 | lasso | 6 | 0.02 | 5.5e-05 | 8.42 | 7.7 | 1.3e-14 | 0.06 | 0.21 | 0.65 | FALSE |
109 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FHL3 | 0.06 | 0.01 | enet | 10 | 0.01 | 4.2e-04 | -6.09 | 5.8 | 4.9e-09 | -0.03 | 0.00 | 0.99 | FALSE |
110 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PABPC4 | 0.03 | 0.03 | lasso | 2 | 0.04 | 1.3e-08 | 8.07 | -8.0 | 1.5e-15 | -0.06 | 0.01 | 0.99 | FALSE |
111 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PPIEL | 0.03 | 0.02 | blup | 41 | 0.03 | 9.0e-07 | 4.38 | 5.3 | 9.4e-08 | 0.03 | 0.33 | 0.67 | FALSE |
112 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PPIEL | 0.06 | 0.08 | lasso | 1 | 0.05 | 1.4e-03 | 6.32 | 6.3 | 2.7e-10 | 0.04 | 0.10 | 0.36 | FALSE |
113 | The Cancer Genome Atlas | Colon Adenocarcinoma | FHL3 | 0.10 | 0.05 | lasso | 2 | 0.06 | 2.9e-04 | 5.66 | 6.3 | 3.7e-10 | 0.00 | 0.00 | 0.98 | FALSE |
114 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | BMP8A | 0.04 | 0.03 | blup | 48 | 0.04 | 3.5e-05 | 6.95 | 8.8 | 1.7e-18 | 0.07 | 0.02 | 0.97 | FALSE |
115 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PABPC4 | 0.03 | 0.01 | enet | 4 | 0.02 | 4.3e-03 | 8.07 | -7.8 | 4.6e-15 | -0.08 | 0.00 | 0.99 | FALSE |
116 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | BMP8A | 0.09 | 0.10 | lasso | 3 | 0.12 | 9.7e-14 | 4.46 | 5.9 | 3.8e-09 | 0.04 | 1.00 | 0.00 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PABPC4 | 0.04 | 0.05 | blup | 31 | 0.04 | 1.2e-05 | 6.68 | -7.8 | 8.9e-15 | -0.07 | 0.04 | 0.95 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PPIEL | 0.03 | 0.03 | lasso | 4 | 0.02 | 5.1e-03 | 6.68 | 5.7 | 1.0e-08 | 0.04 | 0.07 | 0.81 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PABPC4 | 0.05 | 0.05 | enet | 4 | 0.05 | 5.5e-04 | 8.42 | -7.0 | 2.4e-12 | -0.06 | 0.00 | 0.98 | FALSE |
120 | The Cancer Genome Atlas | Brain Lower Grade Glioma | BMP8A | 0.05 | 0.01 | blup | 48 | 0.04 | 6.8e-05 | 8.79 | 9.0 | 2.6e-19 | 0.10 | 0.00 | 0.98 | FALSE |
121 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CTPS | 0.05 | 0.04 | blup | 49 | 0.03 | 1.0e-04 | -3.22 | 5.1 | 3.0e-07 | 0.33 | 0.11 | 0.20 | FALSE |
122 | The Cancer Genome Atlas | Brain Lower Grade Glioma | INPP5B | 0.05 | 0.03 | blup | 68 | 0.05 | 6.7e-06 | 5.26 | 6.0 | 2.4e-09 | 0.00 | 0.03 | 0.96 | FALSE |
123 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PABPC4 | 0.02 | 0.01 | blup | 31 | 0.02 | 4.7e-03 | 8.07 | -5.6 | 2.5e-08 | -0.04 | 0.01 | 0.78 | FALSE |
124 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SCMH1 | 0.04 | 0.01 | enet | 7 | 0.02 | 2.5e-03 | 0.79 | -6.3 | 3.8e-10 | -0.70 | 0.02 | 0.72 | FALSE |
125 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | PPIEL | 0.11 | 0.06 | lasso | 3 | 0.06 | 9.3e-04 | 4.21 | 5.5 | 4.2e-08 | 0.04 | 0.01 | 0.92 | FALSE |
126 | The Cancer Genome Atlas | Lung Adenocarcinoma | FHL3 | 0.03 | 0.02 | blup | 45 | 0.02 | 2.4e-03 | 5.08 | 5.4 | 5.4e-08 | 0.01 | 0.01 | 0.75 | FALSE |
127 | The Cancer Genome Atlas | Lung Adenocarcinoma | PABPC4 | 0.04 | 0.03 | enet | 8 | 0.04 | 4.5e-05 | 8.42 | -7.9 | 2.8e-15 | -0.07 | 0.00 | 1.00 | FALSE |
128 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FHL3 | 0.08 | 0.08 | lasso | 2 | 0.08 | 1.4e-09 | -6.09 | 6.2 | 5.3e-10 | 0.01 | 0.00 | 1.00 | FALSE |
129 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | FHL3 | 0.13 | 0.03 | enet | 6 | 0.05 | 4.9e-04 | -6.09 | 6.2 | 4.2e-10 | -0.01 | 0.00 | 0.94 | FALSE |
130 | The Cancer Genome Atlas | Prostate Adenocarcinoma | BMP8A | 0.07 | 0.06 | enet | 7 | 0.07 | 5.8e-08 | 3.87 | 5.8 | 5.1e-09 | 0.03 | 0.78 | 0.22 | FALSE |
131 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PABPC4 | 0.14 | 0.03 | enet | 8 | 0.08 | 2.3e-08 | 8.07 | -5.6 | 2.3e-08 | -0.06 | 0.00 | 1.00 | FALSE |
132 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PPIEL | 0.04 | 0.02 | lasso | 4 | 0.02 | 1.7e-03 | 6.95 | 7.2 | 5.4e-13 | 0.06 | 0.05 | 0.39 | FALSE |
133 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SCMH1 | 0.03 | 0.03 | lasso | 2 | 0.02 | 6.2e-03 | 9.60 | -9.6 | 7.7e-22 | -1.00 | 0.01 | 0.94 | FALSE |
134 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FHL3 | 0.10 | 0.05 | lasso | 2 | 0.03 | 2.2e-03 | -6.09 | 6.0 | 2.6e-09 | 0.01 | 0.00 | 0.96 | FALSE |
135 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | SCMH1 | 0.35 | 0.14 | blup | 96 | 0.14 | 1.5e-05 | -4.55 | 6.1 | 1.1e-09 | 0.47 | 0.19 | 0.21 | FALSE |
136 | The Cancer Genome Atlas | Thyroid Carcinoma | BMP8A | 0.05 | 0.05 | enet | 6 | 0.04 | 9.1e-05 | 5.70 | 5.8 | 8.3e-09 | 0.02 | 0.63 | 0.25 | FALSE |
137 | The Cancer Genome Atlas | Thyroid Carcinoma | FHL3 | 0.12 | 0.03 | enet | 8 | 0.03 | 6.4e-04 | 5.08 | 5.5 | 4.9e-08 | -0.01 | 0.01 | 0.99 | FALSE |
138 | The Cancer Genome Atlas | Thyroid Carcinoma | PABPC4 | 0.09 | 0.07 | enet | 5 | 0.08 | 4.1e-08 | 8.07 | -8.7 | 3.6e-18 | -0.11 | 0.00 | 1.00 | FALSE |
139 | The Cancer Genome Atlas | Thyroid Carcinoma | SCMH1 | 0.07 | 0.08 | blup | 97 | 0.07 | 2.5e-07 | 9.51 | -10.8 | 3.4e-27 | -0.75 | 0.02 | 0.98 | TRUE |