Best TWAS P=8.87e-32 · Best GWAS P=4.06e-23 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | C9orf24 | 0.07 | 0.04 | enet | 13 | 0.07 | 1.4e-08 | 4.94 | -5.9 | 3.6e-09 | 0.03 | 0.98 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | NUDT2 | 0.45 | 0.36 | lasso | 8 | 0.42 | 6.8e-56 | -4.85 | 5.4 | 7.8e-08 | 0.01 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | PTENP1 | 0.11 | 0.06 | enet | 7 | 0.08 | 6.2e-10 | 3.92 | 5.5 | 3.7e-08 | 0.03 | 0.08 | 0.92 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | TMEM8B | 0.16 | 0.18 | lasso | 3 | 0.17 | 1.2e-20 | -8.20 | -8.2 | 1.8e-16 | 0.35 | 1.00 | 0.00 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | TPM2 | 0.13 | 0.06 | lasso | 4 | 0.09 | 1.7e-11 | -6.57 | -7.0 | 3.5e-12 | 0.27 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | TLN1 | 0.24 | 0.12 | lasso | 5 | 0.11 | 5.1e-09 | -6.57 | 6.0 | 1.7e-09 | -0.24 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | SPAG8 | 0.13 | 0.04 | enet | 14 | 0.06 | 8.7e-06 | -8.61 | -8.2 | 3.7e-16 | 0.29 | 0.98 | 0.00 | FALSE |
8 | GTEx | Adipose Subcutaneous | TMEM8B | 0.23 | 0.25 | lasso | 2 | 0.24 | 6.7e-20 | -8.20 | -8.3 | 1.3e-16 | 0.35 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | NUDT2 | 0.56 | 0.40 | enet | 28 | 0.59 | 5.8e-59 | 4.88 | 6.0 | 2.5e-09 | 0.00 | 0.98 | 0.02 | FALSE |
10 | GTEx | Adipose Subcutaneous | HRCT1 | 0.16 | 0.14 | lasso | 6 | 0.12 | 1.1e-09 | 4.13 | -6.6 | 3.9e-11 | 0.37 | 0.98 | 0.02 | TRUE |
11 | GTEx | Adipose Visceral Omentum | NUDT2 | 0.57 | 0.48 | lasso | 7 | 0.60 | 6.4e-38 | 4.94 | 6.0 | 1.5e-09 | 0.00 | 0.98 | 0.02 | FALSE |
12 | GTEx | Adipose Visceral Omentum | HRCT1 | 0.14 | 0.06 | lasso | 4 | 0.05 | 1.4e-03 | 4.13 | -7.2 | 6.0e-13 | 0.32 | 0.17 | 0.12 | FALSE |
13 | GTEx | Adrenal Gland | NPR2 | 0.23 | 0.06 | lasso | 12 | 0.08 | 9.4e-04 | -0.24 | -6.1 | 9.3e-10 | 0.54 | 0.05 | 0.85 | FALSE |
14 | GTEx | Adrenal Gland | NUDT2 | 0.66 | 0.50 | enet | 24 | 0.68 | 4.4e-32 | 4.94 | 6.2 | 4.8e-10 | 0.01 | 0.98 | 0.02 | FALSE |
15 | GTEx | Adrenal Gland | HRCT1 | 0.23 | 0.19 | lasso | 3 | 0.15 | 6.4e-06 | -8.89 | -10.3 | 5.9e-25 | 0.42 | 0.18 | 0.68 | TRUE |
16 | GTEx | Artery Aorta | SPAG8 | 0.11 | 0.10 | lasso | 7 | 0.06 | 2.0e-04 | 8.40 | -8.5 | 1.4e-17 | 0.13 | 0.75 | 0.01 | FALSE |
17 | GTEx | Artery Aorta | TMEM8B | 0.37 | 0.37 | lasso | 3 | 0.36 | 1.4e-20 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Aorta | NUDT2 | 0.64 | 0.29 | lasso | 5 | 0.58 | 1.1e-38 | 4.94 | 6.1 | 8.7e-10 | 0.00 | 0.98 | 0.02 | FALSE |
19 | GTEx | Artery Aorta | HRCT1 | 0.15 | 0.10 | lasso | 4 | 0.09 | 1.9e-05 | -8.42 | -8.1 | 5.1e-16 | 0.43 | 0.22 | 0.21 | FALSE |
20 | GTEx | Artery Aorta | RP11-112J3.16 | 0.20 | 0.09 | lasso | 5 | 0.11 | 1.6e-06 | -8.26 | -7.7 | 1.1e-14 | 0.34 | 0.96 | 0.01 | FALSE |
21 | GTEx | Artery Coronary | TMEM8B | 0.42 | 0.21 | lasso | 6 | 0.23 | 2.2e-08 | -8.20 | -7.0 | 2.1e-12 | 0.37 | 0.90 | 0.01 | TRUE |
22 | GTEx | Artery Coronary | NUDT2 | 0.64 | 0.36 | lasso | 10 | 0.54 | 1.7e-21 | 4.94 | 6.1 | 1.1e-09 | 0.00 | 0.98 | 0.02 | FALSE |
23 | GTEx | Artery Tibial | TMEM8B | 0.30 | 0.35 | lasso | 1 | 0.35 | 2.5e-28 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
24 | GTEx | Artery Tibial | NUDT2 | 0.59 | 0.48 | enet | 22 | 0.63 | 6.9e-63 | 4.94 | 6.3 | 2.3e-10 | -0.01 | 0.98 | 0.02 | FALSE |
25 | GTEx | Artery Tibial | UBAP1 | 0.08 | 0.05 | enet | 11 | 0.05 | 9.6e-05 | 4.78 | 6.5 | 9.2e-11 | 0.08 | 0.70 | 0.06 | FALSE |
26 | GTEx | Artery Tibial | RP11-112J3.16 | 0.07 | 0.05 | lasso | 3 | 0.05 | 9.1e-05 | -6.59 | -8.3 | 8.7e-17 | 0.34 | 0.84 | 0.04 | FALSE |
27 | GTEx | Brain Caudate basal ganglia | TMEM8B | 0.33 | 0.25 | lasso | 2 | 0.28 | 7.8e-09 | -8.20 | -8.5 | 2.0e-17 | 0.36 | 0.87 | 0.01 | FALSE |
28 | GTEx | Brain Cerebellum | SPAG8 | 0.19 | 0.11 | lasso | 3 | 0.11 | 3.0e-04 | -8.38 | -8.6 | 8.9e-18 | 0.26 | 0.17 | 0.07 | FALSE |
29 | GTEx | Brain Cerebellum | TMEM8B | 0.25 | 0.23 | lasso | 4 | 0.21 | 6.8e-07 | -8.20 | -8.7 | 2.4e-18 | 0.34 | 0.64 | 0.03 | FALSE |
30 | GTEx | Brain Cerebellum | C9orf24 | 0.19 | 0.02 | lasso | 9 | 0.10 | 6.8e-04 | 4.71 | -6.5 | 8.5e-11 | 0.02 | 0.17 | 0.08 | FALSE |
31 | GTEx | Brain Cortex | TMEM8B | 0.37 | 0.29 | lasso | 2 | 0.34 | 2.8e-10 | -8.20 | -8.5 | 1.9e-17 | 0.36 | 0.93 | 0.01 | FALSE |
32 | GTEx | Brain Cortex | NUDT2 | 0.23 | 0.19 | lasso | 4 | 0.16 | 3.6e-05 | -4.86 | 5.7 | 1.5e-08 | 0.03 | 0.15 | 0.09 | FALSE |
33 | GTEx | Brain Frontal Cortex BA9 | TMEM8B | 0.35 | 0.28 | lasso | 3 | 0.21 | 3.2e-06 | -8.20 | -8.1 | 4.4e-16 | 0.34 | 0.48 | 0.03 | FALSE |
34 | GTEx | Brain Frontal Cortex BA9 | NUDT2 | 0.29 | 0.21 | lasso | 4 | 0.16 | 5.4e-05 | -4.85 | 5.2 | 1.5e-07 | -0.01 | 0.27 | 0.10 | FALSE |
35 | GTEx | Brain Frontal Cortex BA9 | RP11-112J3.16 | 0.33 | -0.01 | lasso | 5 | 0.04 | 2.9e-02 | -8.26 | -5.5 | 3.0e-08 | 0.11 | 0.06 | 0.19 | FALSE |
36 | GTEx | Brain Hippocampus | TMEM8B | 0.27 | 0.14 | enet | 15 | 0.14 | 4.4e-04 | 2.80 | -6.7 | 2.5e-11 | 0.30 | 0.10 | 0.19 | FALSE |
37 | GTEx | Brain Hippocampus | HRCT1 | 0.39 | 0.00 | enet | 48 | 0.28 | 2.2e-07 | 4.13 | -5.6 | 2.4e-08 | 0.31 | 0.09 | 0.30 | FALSE |
38 | GTEx | Brain Nucleus accumbens basal ganglia | TMEM8B | 0.32 | 0.36 | lasso | 2 | 0.34 | 6.8e-10 | -8.20 | -8.2 | 2.1e-16 | 0.35 | 0.88 | 0.01 | FALSE |
39 | GTEx | Brain Nucleus accumbens basal ganglia | NUDT2 | 0.24 | 0.07 | enet | 15 | 0.17 | 3.3e-05 | -4.85 | 5.8 | 6.1e-09 | 0.02 | 0.24 | 0.11 | FALSE |
40 | GTEx | Brain Putamen basal ganglia | TMEM8B | 0.29 | 0.28 | lasso | 4 | 0.22 | 5.4e-06 | -8.20 | -8.1 | 4.2e-16 | 0.35 | 0.18 | 0.06 | FALSE |
41 | GTEx | Breast Mammary Tissue | TMEM8B | 0.13 | 0.16 | lasso | 2 | 0.14 | 1.8e-07 | -8.20 | -7.9 | 3.5e-15 | 0.35 | 0.93 | 0.00 | FALSE |
42 | GTEx | Breast Mammary Tissue | NUDT2 | 0.60 | 0.39 | enet | 36 | 0.51 | 2.9e-30 | 5.05 | 6.3 | 3.6e-10 | -0.03 | 0.98 | 0.02 | FALSE |
43 | GTEx | Breast Mammary Tissue (Female) | TMEM8B | 0.23 | 0.12 | lasso | 2 | 0.13 | 1.1e-04 | -8.20 | -8.7 | 2.6e-18 | 0.37 | 0.10 | 0.05 | FALSE |
44 | GTEx | Breast Mammary Tissue (Female) | NUDT2 | 0.55 | 0.28 | lasso | 7 | 0.42 | 6.3e-14 | 4.94 | 6.4 | 1.3e-10 | -0.01 | 0.96 | 0.02 | FALSE |
45 | GTEx | Breast Mammary Tissue (Female) | HRCT1 | 0.10 | 0.03 | enet | 9 | 0.01 | 1.2e-01 | 4.13 | -9.6 | 6.6e-22 | 0.64 | 0.03 | 0.56 | FALSE |
46 | GTEx | Breast Mammary Tissue (Female) | OR13E1P | 0.06 | 0.05 | lasso | 2 | 0.01 | 1.4e-01 | 6.68 | -6.7 | 2.4e-11 | 0.05 | 0.05 | 0.09 | FALSE |
47 | GTEx | Cells EBV-transformed lymphocytes | NUDT2 | 0.62 | 0.28 | enet | 47 | 0.60 | 3.9e-24 | 4.94 | 7.3 | 2.0e-13 | 0.03 | 0.97 | 0.03 | TRUE |
48 | GTEx | Cells Transformed fibroblasts | UBE2R2 | 0.14 | 0.05 | enet | 28 | 0.15 | 1.2e-11 | 6.21 | -5.5 | 4.6e-08 | -0.10 | 0.93 | 0.04 | FALSE |
49 | GTEx | Cells Transformed fibroblasts | TMEM8B | 0.19 | 0.10 | lasso | 5 | 0.13 | 4.8e-10 | -8.25 | -7.0 | 2.6e-12 | 0.40 | 1.00 | 0.00 | FALSE |
50 | GTEx | Cells Transformed fibroblasts | NUDT2 | 0.60 | 0.27 | lasso | 9 | 0.51 | 5.9e-44 | -4.85 | 5.6 | 1.8e-08 | 0.01 | 0.99 | 0.01 | FALSE |
51 | GTEx | Cells Transformed fibroblasts | HRCT1 | 0.13 | 0.08 | lasso | 7 | 0.05 | 1.0e-04 | -8.42 | -8.0 | 9.9e-16 | 0.40 | 0.23 | 0.54 | FALSE |
52 | GTEx | Colon Sigmoid | NUDT2 | 0.59 | 0.34 | lasso | 7 | 0.60 | 1.0e-25 | 4.94 | 6.3 | 2.3e-10 | 0.00 | 0.98 | 0.02 | FALSE |
53 | GTEx | Colon Transverse | TMEM8B | 0.16 | 0.02 | lasso | 5 | 0.08 | 7.5e-05 | -8.26 | -5.2 | 2.5e-07 | 0.26 | 0.08 | 0.68 | FALSE |
54 | GTEx | Colon Transverse | NUDT2 | 0.54 | 0.39 | enet | 17 | 0.56 | 2.2e-31 | 4.94 | 6.2 | 7.3e-10 | 0.00 | 0.98 | 0.02 | FALSE |
55 | GTEx | Colon Transverse | HRCT1 | 0.16 | 0.04 | enet | 27 | 0.08 | 7.8e-05 | -8.42 | -8.3 | 9.7e-17 | 0.42 | 0.18 | 0.46 | TRUE |
56 | GTEx | Esophagus Gastroesophageal Junction | TMEM8B | 0.26 | 0.21 | lasso | 2 | 0.19 | 2.5e-07 | -8.20 | -8.1 | 3.8e-16 | 0.33 | 0.60 | 0.02 | FALSE |
57 | GTEx | Esophagus Gastroesophageal Junction | NUDT2 | 0.50 | 0.28 | lasso | 3 | 0.55 | 3.0e-23 | 4.94 | 6.2 | 6.7e-10 | 0.00 | 0.99 | 0.01 | FALSE |
58 | GTEx | Esophagus Mucosa | NUDT2 | 0.57 | 0.44 | lasso | 8 | 0.60 | 5.6e-49 | 4.94 | 6.1 | 1.4e-09 | 0.00 | 0.98 | 0.02 | FALSE |
59 | GTEx | Esophagus Mucosa | HRCT1 | 0.08 | 0.02 | lasso | 7 | 0.02 | 1.2e-02 | 4.13 | -5.2 | 2.5e-07 | 0.27 | 0.29 | 0.26 | FALSE |
60 | GTEx | Esophagus Muscularis | TMEM8B | 0.20 | 0.22 | lasso | 1 | 0.21 | 5.1e-13 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
61 | GTEx | Esophagus Muscularis | NUDT2 | 0.64 | 0.45 | enet | 20 | 0.65 | 1.6e-50 | 5.05 | 5.8 | 5.5e-09 | 0.00 | 0.98 | 0.02 | FALSE |
62 | GTEx | Esophagus Muscularis | HRCT1 | 0.11 | 0.02 | enet | 22 | 0.05 | 4.4e-04 | -9.88 | -6.1 | 1.2e-09 | 0.69 | 0.01 | 0.93 | FALSE |
63 | GTEx | Heart Atrial Appendage | TMEM8B | 0.17 | 0.26 | lasso | 1 | 0.25 | 1.9e-11 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
64 | GTEx | Heart Atrial Appendage | NUDT2 | 0.50 | 0.22 | enet | 23 | 0.51 | 4.1e-26 | -3.12 | 5.7 | 1.6e-08 | 0.01 | 0.99 | 0.01 | FALSE |
65 | GTEx | Heart Atrial Appendage | RP11-112J3.16 | 0.15 | 0.02 | lasso | 5 | 0.05 | 1.9e-03 | -8.26 | -10.2 | 1.3e-24 | 0.51 | 0.13 | 0.07 | FALSE |
66 | GTEx | Heart Left Ventricle | TMEM8B | 0.13 | 0.16 | lasso | 1 | 0.18 | 8.1e-10 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
67 | GTEx | Heart Left Ventricle | NPR2 | 0.13 | 0.00 | lasso | 5 | 0.00 | 3.1e-01 | -8.26 | 7.7 | 1.2e-14 | -0.34 | 0.06 | 0.20 | FALSE |
68 | GTEx | Heart Left Ventricle | NUDT2 | 0.58 | 0.39 | lasso | 7 | 0.54 | 1.4e-33 | 5.10 | 5.9 | 4.7e-09 | 0.00 | 0.98 | 0.02 | FALSE |
69 | GTEx | Liver | NPR2 | 0.18 | 0.04 | lasso | 3 | 0.02 | 1.1e-01 | 8.36 | -8.1 | 5.8e-16 | 0.10 | 0.16 | 0.04 | FALSE |
70 | GTEx | Liver | NUDT2 | 0.42 | 0.20 | lasso | 8 | 0.32 | 1.2e-09 | 5.05 | 6.4 | 1.2e-10 | 0.01 | 0.43 | 0.36 | FALSE |
71 | GTEx | Lung | TMEM8B | 0.24 | 0.17 | lasso | 3 | 0.16 | 2.2e-12 | -8.20 | -8.3 | 1.3e-16 | 0.36 | 1.00 | 0.00 | FALSE |
72 | GTEx | Lung | NUDT2 | 0.40 | 0.31 | lasso | 9 | 0.45 | 3.6e-38 | 4.94 | 5.8 | 6.4e-09 | 0.00 | 0.98 | 0.02 | FALSE |
73 | GTEx | Lung | HRCT1 | 0.08 | 0.01 | enet | 14 | 0.02 | 5.5e-03 | -8.81 | -8.6 | 6.9e-18 | 0.43 | 0.09 | 0.11 | FALSE |
74 | GTEx | Muscle Skeletal | TMEM8B | 0.23 | 0.24 | lasso | 2 | 0.24 | 1.1e-23 | -8.20 | -7.9 | 3.2e-15 | 0.36 | 1.00 | 0.00 | FALSE |
75 | GTEx | Muscle Skeletal | NUDT2 | 0.60 | 0.49 | enet | 20 | 0.63 | 5.8e-80 | 4.94 | 6.0 | 2.0e-09 | 0.00 | 0.99 | 0.01 | FALSE |
76 | GTEx | Muscle Skeletal | HRCT1 | 0.14 | 0.03 | enet | 13 | 0.02 | 4.5e-03 | 4.13 | -7.5 | 7.9e-14 | 0.50 | 0.12 | 0.82 | FALSE |
77 | GTEx | Muscle Skeletal | RP11-112J3.16 | 0.06 | 0.07 | lasso | 3 | 0.05 | 2.7e-05 | -8.26 | -8.4 | 4.6e-17 | 0.35 | 0.95 | 0.00 | FALSE |
78 | GTEx | Nerve Tibial | SPAG8 | 0.13 | 0.09 | lasso | 4 | 0.08 | 5.2e-06 | -8.61 | -9.5 | 2.8e-21 | 0.34 | 0.98 | 0.01 | FALSE |
79 | GTEx | Nerve Tibial | TMEM8B | 0.54 | 0.50 | lasso | 5 | 0.50 | 1.5e-40 | -8.20 | -8.4 | 3.1e-17 | 0.36 | 1.00 | 0.00 | FALSE |
80 | GTEx | Nerve Tibial | NPR2 | 0.13 | 0.03 | lasso | 4 | 0.08 | 3.1e-06 | 5.01 | -6.3 | 3.2e-10 | 0.18 | 0.71 | 0.01 | FALSE |
81 | GTEx | Nerve Tibial | NUDT2 | 0.62 | 0.45 | enet | 26 | 0.58 | 3.5e-50 | -4.85 | 6.1 | 8.5e-10 | 0.00 | 0.99 | 0.01 | FALSE |
82 | GTEx | Nerve Tibial | DCAF12 | 0.08 | 0.01 | enet | 17 | 0.02 | 2.3e-02 | -3.53 | -5.3 | 1.2e-07 | -0.03 | 0.16 | 0.06 | FALSE |
83 | GTEx | Nerve Tibial | RP11-112J3.16 | 0.13 | 0.07 | lasso | 2 | 0.06 | 8.8e-05 | -8.26 | -8.3 | 7.2e-17 | 0.35 | 0.87 | 0.01 | FALSE |
84 | GTEx | Ovary | TMEM8B | 0.23 | 0.01 | lasso | 5 | 0.02 | 1.0e-01 | -6.58 | -8.4 | 6.3e-17 | 0.36 | 0.08 | 0.18 | FALSE |
85 | GTEx | Pancreas | NUDT2 | 0.48 | 0.32 | lasso | 7 | 0.49 | 1.9e-23 | 4.94 | 5.8 | 5.5e-09 | 0.00 | 0.98 | 0.02 | FALSE |
86 | GTEx | Pancreas | GVQW1 | 0.29 | 0.10 | enet | 16 | 0.13 | 2.9e-06 | -4.25 | 5.8 | 7.3e-09 | -0.04 | 0.02 | 0.78 | TRUE |
87 | GTEx | Pituitary | TMEM8B | 0.29 | 0.25 | lasso | 3 | 0.20 | 8.5e-06 | -8.78 | -7.7 | 1.3e-14 | 0.25 | 0.24 | 0.06 | FALSE |
88 | GTEx | Pituitary | NUDT2 | 0.63 | 0.33 | lasso | 18 | 0.49 | 5.5e-14 | -3.24 | 6.0 | 2.8e-09 | 0.01 | 0.91 | 0.06 | FALSE |
89 | GTEx | Prostate | NUDT2 | 0.52 | 0.24 | lasso | 6 | 0.43 | 4.7e-12 | -2.99 | 5.5 | 4.6e-08 | 0.00 | 0.81 | 0.10 | FALSE |
90 | GTEx | Skin Not Sun Exposed Suprapubic | TMEM8B | 0.12 | 0.14 | lasso | 2 | 0.11 | 1.9e-06 | -8.20 | -8.5 | 1.8e-17 | 0.35 | 0.90 | 0.01 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | TMEM8B | 0.19 | 0.16 | enet | 29 | 0.19 | 6.5e-16 | -8.20 | -9.1 | 7.0e-20 | 0.39 | 1.00 | 0.00 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | NUDT2 | 0.61 | 0.26 | enet | 27 | 0.54 | 4.5e-53 | 4.94 | 6.1 | 1.2e-09 | 0.00 | 0.99 | 0.01 | FALSE |
93 | GTEx | Small Intestine Terminal Ileum | NUDT2 | 0.53 | 0.42 | enet | 8 | 0.37 | 2.9e-09 | -4.85 | 6.2 | 5.0e-10 | 0.01 | 0.70 | 0.04 | FALSE |
94 | GTEx | Spleen | NUDT2 | 0.47 | 0.42 | enet | 17 | 0.50 | 9.2e-15 | -2.99 | 5.6 | 2.6e-08 | 0.00 | 0.87 | 0.12 | FALSE |
95 | GTEx | Stomach | NUDT2 | 0.55 | 0.29 | enet | 23 | 0.56 | 2.0e-31 | 5.10 | 6.7 | 1.7e-11 | 0.01 | 0.98 | 0.02 | FALSE |
96 | GTEx | Testis | TMEM8B | 0.16 | 0.19 | lasso | 2 | 0.16 | 1.2e-07 | -8.61 | -8.6 | 1.1e-17 | 0.33 | 0.89 | 0.01 | TRUE |
97 | GTEx | Testis | NUDT2 | 0.24 | 0.08 | lasso | 11 | 0.14 | 9.8e-07 | -4.85 | 5.5 | 3.7e-08 | -0.01 | 0.74 | 0.05 | FALSE |
98 | GTEx | Thyroid | SPAG8 | 0.15 | 0.00 | enet | 17 | 0.02 | 5.0e-03 | -8.81 | -7.2 | 7.0e-13 | 0.14 | 0.35 | 0.03 | FALSE |
99 | GTEx | Thyroid | TMEM8B | 0.32 | 0.37 | lasso | 1 | 0.36 | 1.3e-28 | -8.20 | -8.2 | 2.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
100 | GTEx | Thyroid | NUDT2 | 0.31 | 0.15 | lasso | 7 | 0.30 | 2.8e-23 | -2.99 | 5.7 | 1.1e-08 | 0.00 | 0.99 | 0.01 | FALSE |
101 | GTEx | Thyroid | HRCT1 | 0.21 | 0.19 | enet | 17 | 0.22 | 6.9e-17 | 4.13 | -7.1 | 1.5e-12 | 0.40 | 1.00 | 0.00 | FALSE |
102 | GTEx | Thyroid | RP11-112J3.16 | 0.26 | 0.13 | lasso | 7 | 0.13 | 1.9e-10 | 6.92 | -9.2 | 2.8e-20 | 0.20 | 1.00 | 0.00 | FALSE |
103 | GTEx | Uterus | NUDT2 | 0.38 | 0.26 | lasso | 8 | 0.32 | 2.7e-07 | 4.66 | 5.9 | 4.0e-09 | 0.01 | 0.14 | 0.07 | FALSE |
104 | GTEx | Vagina | TMEM8B | 0.30 | 0.04 | enet | 31 | 0.04 | 4.5e-02 | 8.18 | -5.4 | 5.4e-08 | 0.02 | 0.07 | 0.05 | FALSE |
105 | GTEx | Vagina | NUDT2 | 0.57 | 0.24 | lasso | 5 | 0.51 | 1.0e-13 | -4.85 | 5.4 | 7.4e-08 | 0.01 | 0.46 | 0.07 | FALSE |
106 | GTEx | Whole Blood | NUDT2 | 0.34 | 0.22 | lasso | 7 | 0.28 | 2.1e-25 | 4.94 | 6.2 | 4.1e-10 | 0.01 | 0.98 | 0.02 | FALSE |
107 | METSIM | Adipose | NUDT2 | 0.32 | 0.19 | bslmm | 341 | 0.34 | 7.0e-52 | -4.85 | 6.0 | 1.6e-09 | -0.01 | 1.00 | 0.00 | FALSE |
108 | METSIM | Adipose | TLN1 | 0.08 | 0.01 | bslmm | 420 | 0.03 | 5.4e-06 | -8.25 | 6.7 | 2.6e-11 | -0.26 | 0.92 | 0.03 | FALSE |
109 | METSIM | Adipose | TMEM8B | 0.06 | 0.09 | lasso | 4 | 0.08 | 1.1e-12 | -8.20 | -8.4 | 6.3e-17 | 0.37 | 0.99 | 0.01 | FALSE |
110 | METSIM | Adipose | UBE2R2 | 0.03 | 0.00 | bslmm | 347 | 0.00 | 9.7e-02 | 6.08 | -5.3 | 9.1e-08 | -0.10 | 0.44 | 0.11 | FALSE |
111 | METSIM | Adipose | UNC13B | 0.03 | 0.00 | blup | 444 | 0.01 | 4.7e-03 | -0.98 | -5.4 | 8.5e-08 | 0.06 | 0.17 | 0.46 | FALSE |
112 | NTR | Blood | NUDT2 | 0.02 | 0.02 | enet | 7 | 0.02 | 6.1e-07 | -4.85 | 5.8 | 4.9e-09 | 0.00 | 0.98 | 0.00 | FALSE |
113 | ROSMAP | Brain Pre-frontal Cortex | UBE2R2 | 0.22 | 0.20 | bslmm | 338 | 0.21 | 1.9e-26 | 5.90 | -6.2 | 7.8e-10 | -0.08 | 0.95 | 0.05 | FALSE |
114 | ROSMAP | Brain Pre-frontal Cortex | TMEM8B | 0.28 | 0.26 | lasso | 7 | 0.30 | 1.8e-39 | -8.20 | -9.1 | 6.7e-20 | 0.32 | 1.00 | 0.00 | FALSE |
115 | ROSMAP | Brain Pre-frontal Cortex | C9orf24 | 0.09 | 0.03 | bslmm | 344 | 0.05 | 1.6e-07 | 4.88 | -6.8 | 1.0e-11 | -0.03 | 0.99 | 0.01 | FALSE |
116 | ROSMAP | Brain Pre-frontal Cortex | NUDT2 | 0.53 | 0.40 | enet | 26 | 0.48 | 8.5e-70 | -4.85 | 5.2 | 2.0e-07 | -0.01 | 1.00 | 0.00 | FALSE |
117 | ROSMAP | Brain Pre-frontal Cortex | RP11-112J3.16 | 0.11 | 0.12 | bslmm | 410 | 0.11 | 1.5e-13 | 6.92 | -7.7 | 1.3e-14 | 0.09 | 1.00 | 0.00 | FALSE |
118 | ROSMAP | Brain Pre-frontal Cortex | RP11-384P7.7 | 0.44 | 0.36 | lasso | 6 | 0.40 | 1.7e-55 | 7.51 | 6.3 | 2.2e-10 | 0.00 | 0.00 | 1.00 | TRUE |
119 | YFS | Blood | NUDT2 | 0.65 | 0.44 | enet | 35 | 0.71 | 0.0e+00 | 4.88 | 6.2 | 4.5e-10 | 0.00 | 0.99 | 0.01 | FALSE |
120 | YFS | Blood | SPAG8 | 0.04 | 0.03 | lasso | 7 | 0.02 | 2.6e-08 | -8.81 | -9.1 | 8.8e-20 | 0.32 | 0.98 | 0.02 | FALSE |
121 | YFS | Blood | UBE2R2 | 0.02 | 0.01 | lasso | 7 | 0.01 | 2.6e-03 | 6.09 | 6.3 | 3.8e-10 | 0.05 | 0.26 | 0.11 | FALSE |
122 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | NUDT2 | 0.36 | 0.22 | enet | 12 | 0.36 | 1.1e-31 | -2.99 | 6.7 | 1.6e-11 | 0.04 | 0.98 | 0.02 | FALSE |
123 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | RGP1 | 0.07 | 0.00 | lasso | 5 | 0.03 | 8.1e-04 | -3.09 | -9.3 | 1.0e-20 | 0.20 | 0.01 | 0.43 | TRUE |
124 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C9orf128 | 0.14 | 0.15 | blup | 50 | 0.16 | 1.4e-32 | 6.51 | -6.3 | 3.1e-10 | 0.08 | 1.00 | 0.00 | FALSE |
125 | The Cancer Genome Atlas | Breast Invasive Carcinoma | NUDT2 | 0.40 | 0.19 | lasso | 6 | 0.42 | 1.2e-92 | 5.05 | 5.7 | 1.2e-08 | 0.00 | 0.78 | 0.22 | FALSE |
126 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SPAG8 | 0.06 | 0.02 | blup | 47 | 0.02 | 6.7e-06 | -8.81 | 6.5 | 9.9e-11 | -0.12 | 0.01 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TMEM8B | 0.04 | 0.02 | blup | 58 | 0.02 | 5.6e-05 | -8.61 | -9.0 | 2.0e-19 | 0.35 | 0.09 | 0.90 | FALSE |
128 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | NUDT2 | 0.33 | 0.15 | enet | 14 | 0.35 | 7.7e-18 | 4.94 | 6.2 | 7.5e-10 | 0.01 | 0.77 | 0.23 | FALSE |
129 | The Cancer Genome Atlas | Colon Adenocarcinoma | C9orf128 | 0.07 | 0.03 | blup | 50 | 0.06 | 2.3e-04 | 6.68 | -8.1 | 5.2e-16 | 0.18 | 0.07 | 0.67 | FALSE |
130 | The Cancer Genome Atlas | Colon Adenocarcinoma | NUDT2 | 0.51 | 0.29 | lasso | 7 | 0.42 | 9.4e-26 | -3.12 | 5.2 | 1.6e-07 | 0.00 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Esophageal Carcinoma | NUDT2 | 0.34 | 0.13 | lasso | 8 | 0.32 | 5.4e-11 | -2.96 | 5.1 | 3.0e-07 | 0.01 | 0.37 | 0.56 | FALSE |
132 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | NUDT2 | 0.25 | 0.22 | blup | 36 | 0.29 | 4.9e-33 | -2.99 | 5.3 | 9.3e-08 | 0.00 | 1.00 | 0.00 | FALSE |
133 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | HRCT1 | 0.14 | 0.01 | blup | 49 | 0.09 | 2.7e-10 | -1.82 | -6.6 | 5.2e-11 | 0.61 | 0.33 | 0.66 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NUDT2 | 0.53 | 0.33 | lasso | 8 | 0.57 | 3.1e-79 | -3.10 | 5.7 | 1.0e-08 | 0.00 | 0.92 | 0.08 | FALSE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SPAG8 | 0.07 | 0.06 | lasso | 3 | 0.06 | 5.5e-07 | -8.81 | 8.9 | 7.2e-19 | -0.29 | 0.01 | 0.99 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TMEM8B | 0.05 | 0.03 | enet | 15 | 0.03 | 3.7e-04 | -8.20 | -7.4 | 1.1e-13 | 0.28 | 0.06 | 0.53 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | UBE2R2 | 0.10 | 0.00 | enet | 13 | 0.02 | 4.0e-03 | 6.16 | -5.7 | 9.5e-09 | -0.14 | 0.00 | 0.95 | FALSE |
138 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | NUDT2 | 0.40 | 0.33 | lasso | 4 | 0.46 | 6.4e-29 | 5.10 | 5.5 | 5.0e-08 | 0.00 | 0.66 | 0.34 | FALSE |
139 | The Cancer Genome Atlas | Brain Lower Grade Glioma | HRCT1 | 0.12 | 0.06 | blup | 49 | 0.08 | 3.7e-09 | 3.60 | -6.3 | 2.9e-10 | 0.42 | 0.96 | 0.01 | FALSE |
140 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC92973 | 0.04 | 0.03 | blup | 48 | 0.04 | 2.4e-05 | -8.20 | -5.8 | 8.9e-09 | 0.33 | 0.15 | 0.22 | FALSE |
141 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TMEM8B | 0.13 | 0.13 | blup | 58 | 0.12 | 7.6e-14 | -8.20 | -7.5 | 6.2e-14 | 0.33 | 0.42 | 0.58 | TRUE |
142 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | NUDT2 | 0.33 | 0.14 | lasso | 8 | 0.30 | 2.4e-14 | 5.10 | 5.7 | 1.5e-08 | 0.00 | 0.72 | 0.27 | FALSE |
143 | The Cancer Genome Atlas | Lung Adenocarcinoma | C9orf128 | 0.07 | 0.07 | lasso | 2 | 0.07 | 1.6e-08 | 6.51 | -6.7 | 1.8e-11 | 0.02 | 0.41 | 0.59 | FALSE |
144 | The Cancer Genome Atlas | Lung Adenocarcinoma | HRCT1 | 0.14 | 0.06 | enet | 15 | 0.08 | 3.0e-09 | -1.84 | -5.5 | 5.1e-08 | 0.38 | 0.76 | 0.08 | FALSE |
145 | The Cancer Genome Atlas | Lung Adenocarcinoma | NUDT2 | 0.26 | 0.21 | blup | 36 | 0.36 | 5.6e-44 | -3.10 | 5.5 | 4.0e-08 | 0.00 | 0.92 | 0.08 | FALSE |
146 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C9orf128 | 0.02 | 0.01 | blup | 50 | 0.01 | 2.3e-02 | 6.52 | -5.6 | 2.2e-08 | 0.01 | 0.04 | 0.77 | FALSE |
147 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C9orf24 | 0.05 | 0.01 | enet | 6 | 0.01 | 7.8e-03 | 4.59 | -6.5 | 7.3e-11 | -0.05 | 0.04 | 0.16 | FALSE |
148 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | HRCT1 | 0.04 | 0.00 | blup | 49 | 0.02 | 7.9e-04 | -8.42 | -9.0 | 3.3e-19 | 0.55 | 0.01 | 0.07 | FALSE |
149 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | NUDT2 | 0.26 | 0.21 | blup | 36 | 0.32 | 1.6e-36 | -2.99 | 5.2 | 1.6e-07 | -0.01 | 1.00 | 0.00 | TRUE |
150 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | NUDT2 | 0.27 | 0.12 | blup | 36 | 0.25 | 4.5e-17 | -2.99 | 5.9 | 3.6e-09 | 0.01 | 0.96 | 0.04 | FALSE |
151 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | NUDT2 | 0.51 | 0.16 | enet | 16 | 0.38 | 7.5e-17 | 5.10 | 6.0 | 2.0e-09 | -0.01 | 0.69 | 0.31 | FALSE |
152 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | HRCT1 | 0.15 | 0.00 | blup | 49 | 0.07 | 8.1e-04 | 4.53 | -6.0 | 2.5e-09 | 0.55 | 0.02 | 0.24 | FALSE |
153 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | NUDT2 | 0.62 | 0.42 | enet | 14 | 0.57 | 3.6e-27 | -2.99 | 5.3 | 9.9e-08 | 0.01 | 1.00 | 0.00 | FALSE |
154 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C9orf128 | 0.11 | 0.18 | lasso | 2 | 0.16 | 3.7e-16 | 6.52 | -6.5 | 6.8e-11 | 0.06 | 0.95 | 0.05 | FALSE |
155 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NUDT2 | 0.59 | 0.36 | enet | 21 | 0.60 | 2.4e-79 | -2.99 | 6.1 | 1.3e-09 | 0.01 | 1.00 | 0.00 | FALSE |
156 | The Cancer Genome Atlas | Prostate Adenocarcinoma | UBAP2 | 0.06 | 0.06 | lasso | 2 | 0.05 | 3.3e-06 | 5.52 | 6.2 | 4.7e-10 | 0.10 | 0.03 | 0.94 | FALSE |
157 | The Cancer Genome Atlas | Rectum Adenocarcinoma | C9orf128 | 0.26 | 0.06 | enet | 7 | 0.14 | 4.6e-04 | -8.78 | -8.0 | 9.0e-16 | 0.15 | 0.01 | 0.81 | FALSE |
158 | The Cancer Genome Atlas | Rectum Adenocarcinoma | HRCT1 | 0.26 | 0.03 | blup | 49 | 0.11 | 1.5e-03 | -9.06 | -11.7 | 8.9e-32 | 0.59 | 0.01 | 0.14 | TRUE |
159 | The Cancer Genome Atlas | Rectum Adenocarcinoma | NUDT2 | 0.49 | 0.25 | blup | 36 | 0.35 | 5.5e-09 | -2.99 | 6.7 | 1.6e-11 | 0.03 | 0.08 | 0.82 | FALSE |
160 | The Cancer Genome Atlas | Soft Tissue Sarcoma | NUDT2 | 0.28 | 0.18 | lasso | 6 | 0.26 | 9.5e-16 | -2.99 | 5.5 | 3.7e-08 | 0.00 | 0.98 | 0.02 | FALSE |
161 | The Cancer Genome Atlas | Stomach Adenocarcinoma | C9orf128 | 0.04 | 0.06 | lasso | 2 | 0.05 | 2.8e-04 | 8.81 | -8.9 | 8.3e-19 | 0.11 | 0.01 | 0.90 | TRUE |
162 | The Cancer Genome Atlas | Stomach Adenocarcinoma | NUDT2 | 0.30 | 0.22 | enet | 13 | 0.32 | 9.7e-24 | -2.99 | 6.0 | 2.0e-09 | 0.03 | 1.00 | 0.00 | FALSE |
163 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | NUDT2 | 0.43 | 0.09 | blup | 36 | 0.34 | 8.3e-13 | -3.12 | 6.4 | 1.6e-10 | 0.01 | 0.27 | 0.72 | FALSE |
164 | The Cancer Genome Atlas | Thyroid Carcinoma | C9orf128 | 0.12 | 0.19 | lasso | 1 | 0.20 | 8.5e-19 | 6.52 | -6.5 | 6.8e-11 | 0.06 | 0.92 | 0.08 | FALSE |
165 | The Cancer Genome Atlas | Thyroid Carcinoma | HRCT1 | 0.09 | 0.02 | blup | 49 | 0.02 | 2.0e-03 | -9.06 | -8.0 | 9.0e-16 | 0.54 | 0.10 | 0.12 | FALSE |
166 | The Cancer Genome Atlas | Thyroid Carcinoma | NUDT2 | 0.29 | 0.21 | enet | 17 | 0.38 | 8.8e-39 | 5.10 | 5.8 | 4.8e-09 | 0.01 | 0.71 | 0.29 | FALSE |
167 | The Cancer Genome Atlas | Thyroid Carcinoma | SPAG8 | 0.08 | 0.02 | lasso | 2 | 0.02 | 3.5e-03 | -8.81 | 8.8 | 1.3e-18 | -0.30 | 0.01 | 0.99 | FALSE |
168 | The Cancer Genome Atlas | Thyroid Carcinoma | TMEM8B | 0.18 | 0.08 | lasso | 3 | 0.10 | 1.6e-09 | 3.91 | -7.3 | 2.9e-13 | 0.36 | 0.11 | 0.89 | FALSE |
169 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | NUDT2 | 0.29 | 0.08 | blup | 36 | 0.23 | 5.2e-07 | -3.12 | 6.2 | 7.2e-10 | 0.01 | 0.05 | 0.60 | FALSE |