Best TWAS P=6.89e-20 · Best GWAS P=2.42e-20 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ARNT | 0.23 | 0.30 | lasso | 6 | 0.30 | 1.1e-37 | 9.24 | 9.1 | 6.9e-20 | 0.99 | 0.00 | 1.00 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | CERS2 | 0.04 | 0.03 | bslmm | 307 | 0.02 | 1.7e-03 | 8.59 | 8.2 | 1.8e-16 | 0.91 | 0.01 | 0.98 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | CTSS | 0.04 | 0.01 | bslmm | 313 | 0.02 | 5.5e-04 | -1.33 | 6.1 | 8.5e-10 | 0.70 | 0.12 | 0.75 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | GABPB2 | 0.05 | 0.01 | blup | 324 | 0.01 | 1.6e-02 | 0.75 | -5.5 | 4.9e-08 | -0.67 | 0.07 | 0.44 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | GOLPH3L | 0.15 | 0.27 | lasso | 11 | 0.27 | 1.5e-32 | 7.87 | -8.0 | 1.1e-15 | -0.76 | 0.99 | 0.01 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | HORMAD1 | 0.21 | 0.26 | lasso | 15 | 0.32 | 2.9e-39 | 8.35 | 9.0 | 2.4e-19 | 0.91 | 0.12 | 0.88 | FALSE |
7 | GTEx | Adipose Subcutaneous | ARNT | 0.06 | 0.01 | lasso | 3 | 0.00 | 3.9e-01 | 7.22 | 7.3 | 3.0e-13 | 0.86 | 0.02 | 0.89 | FALSE |
8 | GTEx | Adipose Subcutaneous | RP11-316M1.12 | 0.23 | 0.46 | enet | 17 | 0.46 | 4.8e-42 | 8.26 | -8.6 | 6.2e-18 | -0.83 | 0.63 | 0.37 | FALSE |
9 | GTEx | Adipose Visceral Omentum | CERS2 | 0.06 | 0.02 | enet | 9 | 0.09 | 2.8e-05 | 3.77 | -7.1 | 1.6e-12 | -0.64 | 0.04 | 0.80 | FALSE |
10 | GTEx | Adipose Visceral Omentum | ARNT | 0.06 | 0.04 | enet | 11 | 0.06 | 3.5e-04 | 6.05 | 8.0 | 1.4e-15 | 0.84 | 0.03 | 0.94 | FALSE |
11 | GTEx | Adipose Visceral Omentum | RP11-316M1.12 | 0.40 | 0.46 | enet | 21 | 0.52 | 2.7e-31 | 8.26 | -8.9 | 6.9e-19 | -0.85 | 0.46 | 0.54 | FALSE |
12 | GTEx | Adrenal Gland | CTSK | 0.19 | -0.01 | enet | 12 | 0.00 | 3.1e-01 | 8.89 | 7.8 | 7.3e-15 | 0.72 | 0.04 | 0.41 | FALSE |
13 | GTEx | Adrenal Gland | CTSS | 0.12 | 0.13 | lasso | 9 | 0.08 | 7.0e-04 | 5.73 | 7.1 | 1.4e-12 | 0.69 | 0.13 | 0.83 | FALSE |
14 | GTEx | Adrenal Gland | RP11-316M1.12 | 0.22 | 0.37 | lasso | 12 | 0.37 | 4.6e-14 | 8.31 | -8.4 | 6.4e-17 | -0.80 | 0.22 | 0.78 | FALSE |
15 | GTEx | Artery Aorta | ARNT | 0.16 | 0.14 | lasso | 8 | 0.12 | 6.1e-07 | 8.89 | 9.0 | 1.8e-19 | 0.89 | 0.10 | 0.90 | FALSE |
16 | GTEx | Artery Aorta | RP11-316M1.12 | 0.44 | 0.48 | lasso | 8 | 0.49 | 2.2e-30 | 8.26 | -8.2 | 1.8e-16 | -0.82 | 0.43 | 0.57 | FALSE |
17 | GTEx | Artery Coronary | RP11-316M1.12 | 0.24 | 0.36 | lasso | 5 | 0.36 | 4.9e-13 | 8.26 | -8.3 | 8.6e-17 | -0.80 | 0.28 | 0.72 | FALSE |
18 | GTEx | Artery Tibial | ARNT | 0.09 | 0.07 | lasso | 3 | 0.06 | 1.5e-05 | -4.92 | 6.1 | 1.2e-09 | 0.72 | 0.08 | 0.88 | FALSE |
19 | GTEx | Artery Tibial | GOLPH3L | 0.04 | 0.04 | enet | 12 | 0.03 | 1.4e-03 | 7.87 | -8.5 | 2.1e-17 | -0.88 | 0.18 | 0.81 | FALSE |
20 | GTEx | Artery Tibial | RP11-316M1.12 | 0.26 | 0.46 | lasso | 7 | 0.47 | 1.6e-40 | 8.31 | -8.5 | 1.7e-17 | -0.82 | 0.68 | 0.32 | FALSE |
21 | GTEx | Brain Caudate basal ganglia | RP11-316M1.12 | 0.30 | 0.15 | enet | 28 | 0.19 | 3.8e-06 | 8.81 | -7.6 | 3.4e-14 | -0.71 | 0.13 | 0.86 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | CTSS | 0.10 | 0.01 | enet | 2 | 0.05 | 2.2e-02 | 8.32 | 8.4 | 6.2e-17 | 0.85 | 0.06 | 0.51 | FALSE |
23 | GTEx | Brain Cerebellar Hemisphere | RP11-316M1.12 | 0.31 | 0.37 | lasso | 4 | 0.39 | 4.5e-11 | 8.49 | -7.6 | 2.5e-14 | -0.74 | 0.44 | 0.56 | TRUE |
24 | GTEx | Brain Cerebellum | CTSK | 0.11 | 0.14 | lasso | 3 | 0.11 | 4.0e-04 | 7.75 | 8.0 | 9.1e-16 | 0.90 | 0.04 | 0.81 | FALSE |
25 | GTEx | Brain Cerebellum | CTSS | 0.23 | 0.02 | enet | 25 | 0.07 | 5.0e-03 | 8.59 | 5.5 | 3.4e-08 | 0.72 | 0.02 | 0.93 | FALSE |
26 | GTEx | Brain Cerebellum | RP11-316M1.12 | 0.22 | 0.28 | lasso | 7 | 0.28 | 8.5e-09 | 8.26 | -8.5 | 2.5e-17 | -0.81 | 0.14 | 0.86 | FALSE |
27 | GTEx | Brain Cortex | RP11-316M1.12 | 0.15 | 0.18 | lasso | 6 | 0.13 | 1.8e-04 | 7.87 | -8.2 | 2.6e-16 | -0.77 | 0.14 | 0.83 | FALSE |
28 | GTEx | Brain Frontal Cortex BA9 | RP11-316M1.12 | 0.18 | 0.10 | lasso | 3 | 0.06 | 1.3e-02 | 8.32 | -8.0 | 1.1e-15 | -0.72 | 0.11 | 0.73 | FALSE |
29 | GTEx | Brain Hippocampus | ARNT | 0.14 | 0.09 | enet | 14 | 0.08 | 5.3e-03 | 8.59 | 7.3 | 2.0e-13 | 0.90 | 0.03 | 0.76 | FALSE |
30 | GTEx | Brain Hypothalamus | RP11-316M1.12 | 0.14 | 0.03 | lasso | 6 | 0.02 | 9.9e-02 | 6.19 | -5.6 | 2.5e-08 | -0.55 | 0.08 | 0.27 | FALSE |
31 | GTEx | Brain Nucleus accumbens basal ganglia | RP11-316M1.12 | 0.36 | 0.31 | lasso | 8 | 0.32 | 3.3e-09 | 8.81 | -8.6 | 1.2e-17 | -0.78 | 0.15 | 0.85 | FALSE |
32 | GTEx | Brain Putamen basal ganglia | RP11-316M1.12 | 0.25 | 0.02 | lasso | 6 | 0.02 | 8.7e-02 | 8.81 | -6.8 | 1.1e-11 | -0.79 | 0.08 | 0.65 | FALSE |
33 | GTEx | Breast Mammary Tissue | SETDB1 | 0.06 | 0.01 | enet | 7 | 0.04 | 3.9e-03 | 7.87 | -5.1 | 2.9e-07 | -0.35 | 0.12 | 0.54 | FALSE |
34 | GTEx | Breast Mammary Tissue | RP11-54A4.2 | 0.06 | 0.01 | enet | 3 | 0.00 | 4.1e-01 | 8.49 | -8.4 | 4.7e-17 | -0.80 | 0.07 | 0.62 | FALSE |
35 | GTEx | Breast Mammary Tissue | RP11-316M1.12 | 0.14 | 0.16 | lasso | 8 | 0.18 | 7.8e-10 | 8.93 | -8.6 | 9.1e-18 | -0.85 | 0.08 | 0.92 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | SETDB1 | 0.13 | 0.00 | enet | 7 | 0.04 | 3.8e-02 | 6.19 | -5.5 | 4.9e-08 | -0.42 | 0.07 | 0.22 | FALSE |
37 | GTEx | Breast Mammary Tissue (Male) | RP11-54A4.2 | 0.07 | 0.01 | enet | 2 | 0.03 | 7.4e-02 | -5.66 | -6.1 | 1.0e-09 | -0.57 | 0.03 | 0.30 | FALSE |
38 | GTEx | Breast Mammary Tissue (Male) | RP11-316M1.12 | 0.15 | 0.17 | lasso | 5 | 0.19 | 3.0e-05 | 7.75 | -8.7 | 2.3e-18 | -0.90 | 0.06 | 0.87 | FALSE |
39 | GTEx | Breast Mammary Tissue (Female) | RP11-316M1.12 | 0.08 | 0.02 | enet | 8 | 0.02 | 9.4e-02 | 8.48 | -9.1 | 1.1e-19 | -0.84 | 0.07 | 0.50 | FALSE |
40 | GTEx | Cells EBV-transformed lymphocytes | CTSS | 0.28 | 0.22 | lasso | 8 | 0.30 | 3.0e-10 | 9.07 | 9.1 | 9.5e-20 | 0.94 | 0.03 | 0.97 | FALSE |
41 | GTEx | Cells EBV-transformed lymphocytes | RP11-316M1.12 | 0.20 | 0.21 | enet | 30 | 0.20 | 5.8e-07 | 8.26 | -7.1 | 1.2e-12 | -0.78 | 0.20 | 0.79 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | ARNT | 0.10 | 0.09 | enet | 27 | 0.08 | 1.8e-06 | 9.09 | 7.1 | 1.5e-12 | 0.93 | 0.01 | 0.99 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | CTSS | 0.05 | 0.02 | lasso | 6 | 0.03 | 1.4e-03 | 8.81 | 8.8 | 1.8e-18 | 0.83 | 0.13 | 0.87 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | RP11-316M1.12 | 0.25 | 0.46 | lasso | 9 | 0.47 | 6.2e-39 | 8.31 | -8.5 | 1.3e-17 | -0.82 | 0.37 | 0.63 | FALSE |
45 | GTEx | Colon Sigmoid | RP11-316M1.12 | 0.21 | 0.42 | lasso | 9 | 0.39 | 8.4e-15 | 8.26 | -8.6 | 7.6e-18 | -0.84 | 0.26 | 0.74 | FALSE |
46 | GTEx | Colon Transverse | RP11-54A4.2 | 0.15 | 0.06 | lasso | 3 | 0.09 | 5.2e-05 | -3.71 | -5.5 | 3.5e-08 | -0.14 | 0.11 | 0.17 | TRUE |
47 | GTEx | Colon Transverse | RP11-316M1.12 | 0.28 | 0.47 | lasso | 6 | 0.46 | 4.2e-24 | 8.26 | -8.2 | 1.6e-16 | -0.80 | 0.22 | 0.78 | FALSE |
48 | GTEx | Esophagus Gastroesophageal Junction | ARNT | 0.11 | 0.03 | enet | 18 | 0.02 | 8.8e-02 | 8.86 | 5.5 | 4.7e-08 | 0.69 | 0.08 | 0.67 | FALSE |
49 | GTEx | Esophagus Gastroesophageal Junction | RP11-316M1.12 | 0.25 | 0.40 | lasso | 8 | 0.41 | 4.4e-16 | 8.26 | -8.1 | 3.9e-16 | -0.79 | 0.27 | 0.73 | FALSE |
50 | GTEx | Esophagus Mucosa | CERS2 | 0.03 | 0.04 | lasso | 2 | 0.01 | 1.2e-01 | 7.75 | -8.3 | 1.0e-16 | -0.89 | 0.09 | 0.76 | FALSE |
51 | GTEx | Esophagus Mucosa | GOLPH3L | 0.14 | 0.14 | lasso | 9 | 0.13 | 5.6e-09 | 8.00 | 8.8 | 9.5e-19 | 0.84 | 0.13 | 0.87 | FALSE |
52 | GTEx | Esophagus Mucosa | CTSS | 0.10 | 0.10 | enet | 10 | 0.06 | 6.8e-05 | 9.07 | 7.7 | 1.2e-14 | 0.91 | 0.01 | 0.99 | FALSE |
53 | GTEx | Esophagus Mucosa | RP11-316M1.12 | 0.17 | 0.38 | lasso | 7 | 0.38 | 3.7e-27 | 8.36 | -8.4 | 4.4e-17 | -0.82 | 0.35 | 0.65 | FALSE |
54 | GTEx | Esophagus Muscularis | ARNT | 0.08 | 0.07 | enet | 7 | 0.05 | 3.3e-04 | 8.59 | 9.0 | 2.1e-19 | 0.98 | 0.02 | 0.98 | FALSE |
55 | GTEx | Esophagus Muscularis | CTSS | 0.05 | 0.04 | enet | 12 | 0.06 | 1.2e-04 | 9.07 | 8.6 | 1.1e-17 | 0.88 | 0.02 | 0.96 | FALSE |
56 | GTEx | Esophagus Muscularis | RP11-316M1.12 | 0.26 | 0.46 | lasso | 2 | 0.44 | 2.5e-29 | 8.26 | -8.3 | 1.5e-16 | -0.80 | 0.47 | 0.53 | FALSE |
57 | GTEx | Heart Atrial Appendage | RP11-316M1.12 | 0.28 | 0.41 | enet | 20 | 0.42 | 4.2e-20 | 8.26 | -8.4 | 2.9e-17 | -0.83 | 0.14 | 0.86 | FALSE |
58 | GTEx | Heart Left Ventricle | CERS2 | 0.08 | 0.02 | enet | 9 | 0.03 | 1.7e-02 | 8.36 | -5.5 | 3.0e-08 | -0.45 | 0.12 | 0.43 | FALSE |
59 | GTEx | Heart Left Ventricle | RP11-316M1.12 | 0.21 | 0.29 | lasso | 2 | 0.30 | 2.5e-16 | 8.36 | -8.1 | 6.4e-16 | -0.79 | 0.34 | 0.66 | FALSE |
60 | GTEx | Liver | CERS2 | 0.09 | 0.08 | lasso | 3 | 0.06 | 9.9e-03 | 8.75 | -8.8 | 1.9e-18 | -0.82 | 0.08 | 0.56 | FALSE |
61 | GTEx | Liver | CTSS | 0.11 | 0.10 | lasso | 13 | 0.09 | 2.0e-03 | 8.77 | 8.9 | 5.1e-19 | 0.84 | 0.08 | 0.82 | FALSE |
62 | GTEx | Liver | RP11-316M1.12 | 0.27 | 0.33 | lasso | 5 | 0.37 | 2.9e-11 | 8.49 | -8.2 | 2.1e-16 | -0.79 | 0.12 | 0.88 | FALSE |
63 | GTEx | Lung | CERS2 | 0.03 | 0.04 | lasso | 3 | 0.03 | 4.2e-03 | 8.81 | -8.7 | 5.0e-18 | -0.83 | 0.11 | 0.84 | FALSE |
64 | GTEx | Lung | RP11-316M1.12 | 0.30 | 0.52 | lasso | 6 | 0.51 | 3.1e-44 | 8.29 | -8.3 | 6.6e-17 | -0.80 | 0.70 | 0.30 | FALSE |
65 | GTEx | Muscle Skeletal | CERS2 | 0.03 | 0.04 | lasso | 4 | 0.03 | 4.1e-04 | 7.75 | -8.4 | 4.1e-17 | -0.86 | 0.09 | 0.81 | FALSE |
66 | GTEx | Muscle Skeletal | GOLPH3L | 0.02 | 0.01 | lasso | 2 | 0.00 | 6.1e-01 | 8.49 | -8.7 | 2.4e-18 | -0.83 | 0.06 | 0.78 | FALSE |
67 | GTEx | Muscle Skeletal | CTSS | 0.04 | 0.01 | enet | 13 | 0.03 | 1.4e-03 | 6.03 | 7.3 | 2.5e-13 | 0.70 | 0.10 | 0.81 | FALSE |
68 | GTEx | Muscle Skeletal | RP11-316M1.12 | 0.16 | 0.26 | lasso | 8 | 0.27 | 9.1e-27 | 8.26 | -8.4 | 4.2e-17 | -0.84 | 0.49 | 0.51 | FALSE |
69 | GTEx | Nerve Tibial | SETDB1 | 0.13 | 0.07 | enet | 30 | 0.12 | 8.6e-09 | 8.81 | -6.7 | 1.7e-11 | -0.53 | 0.16 | 0.83 | FALSE |
70 | GTEx | Nerve Tibial | CERS2 | 0.04 | 0.07 | enet | 5 | 0.05 | 1.4e-04 | 7.75 | -8.1 | 4.1e-16 | -0.87 | 0.14 | 0.77 | FALSE |
71 | GTEx | Nerve Tibial | ARNT | 0.25 | 0.08 | enet | 23 | 0.17 | 4.3e-12 | 9.09 | 7.7 | 1.2e-14 | 0.89 | 0.00 | 1.00 | FALSE |
72 | GTEx | Nerve Tibial | GOLPH3L | 0.33 | 0.52 | lasso | 5 | 0.50 | 1.6e-40 | 7.41 | 7.5 | 6.8e-14 | 0.71 | 1.00 | 0.00 | FALSE |
73 | GTEx | Nerve Tibial | RP11-316M1.12 | 0.28 | 0.48 | enet | 17 | 0.51 | 3.1e-41 | 8.26 | -8.5 | 2.1e-17 | -0.84 | 0.59 | 0.41 | FALSE |
74 | GTEx | Ovary | RP11-316M1.12 | 0.17 | 0.11 | lasso | 6 | 0.13 | 5.2e-04 | 8.26 | -8.4 | 4.5e-17 | -0.86 | 0.14 | 0.78 | FALSE |
75 | GTEx | Pancreas | CTSS | 0.07 | 0.07 | lasso | 8 | 0.06 | 2.3e-03 | 8.31 | 8.2 | 1.7e-16 | 0.83 | 0.13 | 0.64 | FALSE |
76 | GTEx | Pancreas | RP11-316M1.12 | 0.21 | 0.28 | lasso | 10 | 0.26 | 1.5e-11 | 8.36 | -8.6 | 6.1e-18 | -0.82 | 0.15 | 0.85 | FALSE |
77 | GTEx | Pituitary | CTSK | 0.14 | 0.14 | lasso | 2 | 0.06 | 1.6e-02 | 8.59 | 8.6 | 8.4e-18 | 0.95 | 0.03 | 0.78 | FALSE |
78 | GTEx | Pituitary | RP11-316M1.12 | 0.47 | 0.51 | lasso | 4 | 0.49 | 5.3e-14 | 8.26 | -8.3 | 1.2e-16 | -0.80 | 0.14 | 0.86 | FALSE |
79 | GTEx | Prostate | RP11-316M1.12 | 0.16 | 0.23 | enet | 24 | 0.21 | 5.2e-06 | 7.41 | -8.1 | 3.9e-16 | -0.77 | 0.19 | 0.78 | FALSE |
80 | GTEx | Skin Not Sun Exposed Suprapubic | SETDB1 | 0.07 | 0.06 | lasso | 6 | 0.03 | 5.3e-03 | 8.31 | -8.5 | 2.3e-17 | -0.81 | 0.12 | 0.82 | FALSE |
81 | GTEx | Skin Not Sun Exposed Suprapubic | ANXA9 | 0.11 | 0.12 | lasso | 2 | 0.13 | 2.0e-07 | -4.83 | 7.2 | 5.8e-13 | 0.68 | 0.15 | 0.78 | TRUE |
82 | GTEx | Skin Not Sun Exposed Suprapubic | GOLPH3L | 0.23 | 0.32 | lasso | 10 | 0.31 | 1.6e-17 | 7.95 | 8.1 | 7.0e-16 | 0.78 | 0.79 | 0.21 | FALSE |
83 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-316M1.12 | 0.19 | 0.37 | lasso | 2 | 0.38 | 7.6e-22 | 8.32 | -8.2 | 2.0e-16 | -0.79 | 0.26 | 0.74 | FALSE |
84 | GTEx | Skin Sun Exposed Lower leg | ANXA9 | 0.12 | 0.04 | lasso | 3 | 0.08 | 3.8e-07 | -4.81 | 7.6 | 3.1e-14 | 0.70 | 0.26 | 0.73 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | GOLPH3L | 0.18 | 0.36 | enet | 48 | 0.39 | 4.7e-34 | 8.31 | 8.5 | 2.0e-17 | 0.81 | 0.22 | 0.78 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | CTSS | 0.19 | 0.02 | lasso | 8 | 0.08 | 1.9e-07 | 2.37 | 6.7 | 1.6e-11 | 0.64 | 0.07 | 0.93 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | RP11-316M1.12 | 0.15 | 0.26 | enet | 20 | 0.26 | 1.1e-21 | 8.26 | -8.7 | 3.8e-18 | -0.84 | 0.19 | 0.81 | FALSE |
88 | GTEx | Spleen | RP11-54A4.2 | 0.29 | 0.10 | lasso | 9 | 0.04 | 3.8e-02 | 5.73 | -7.5 | 7.1e-14 | -0.69 | 0.16 | 0.52 | FALSE |
89 | GTEx | Spleen | RP11-316M1.12 | 0.39 | 0.55 | lasso | 12 | 0.53 | 3.9e-16 | 8.29 | -8.4 | 4.0e-17 | -0.81 | 0.23 | 0.77 | FALSE |
90 | GTEx | Stomach | CTSS | 0.05 | 0.02 | enet | 16 | 0.00 | 2.8e-01 | 8.29 | 7.4 | 1.9e-13 | 0.78 | 0.10 | 0.59 | FALSE |
91 | GTEx | Stomach | RP11-316M1.12 | 0.14 | 0.20 | lasso | 6 | 0.19 | 1.7e-09 | 8.32 | -8.3 | 8.8e-17 | -0.80 | 0.18 | 0.82 | FALSE |
92 | GTEx | Testis | CTSK | 0.07 | 0.01 | enet | 19 | 0.01 | 1.2e-01 | 8.86 | 8.9 | 7.9e-19 | 0.83 | 0.11 | 0.72 | FALSE |
93 | GTEx | Testis | GOLPH3L | 0.11 | 0.13 | lasso | 3 | 0.14 | 1.2e-06 | 8.81 | 8.8 | 1.3e-18 | 0.82 | 0.12 | 0.88 | FALSE |
94 | GTEx | Testis | CTSS | 0.12 | 0.19 | lasso | 3 | 0.18 | 2.1e-08 | 8.26 | 8.6 | 1.1e-17 | 0.82 | 0.12 | 0.88 | FALSE |
95 | GTEx | Testis | RP11-316M1.12 | 0.30 | 0.32 | lasso | 8 | 0.30 | 6.4e-14 | 8.26 | -8.3 | 1.2e-16 | -0.79 | 0.17 | 0.83 | FALSE |
96 | GTEx | Thyroid | SETDB1 | 0.03 | 0.02 | enet | 9 | 0.01 | 2.9e-02 | 8.86 | -8.1 | 4.0e-16 | -0.74 | 0.10 | 0.83 | FALSE |
97 | GTEx | Thyroid | CERS2 | 0.06 | 0.05 | lasso | 4 | 0.04 | 2.4e-04 | 8.26 | -8.5 | 2.4e-17 | -0.84 | 0.14 | 0.85 | FALSE |
98 | GTEx | Thyroid | ARNT | 0.08 | 0.10 | lasso | 10 | 0.10 | 7.8e-08 | -8.28 | 7.9 | 2.0e-15 | 0.90 | 0.08 | 0.92 | TRUE |
99 | GTEx | Thyroid | CTSS | 0.15 | 0.12 | enet | 30 | 0.18 | 2.4e-13 | 8.36 | 8.4 | 3.5e-17 | 0.88 | 0.10 | 0.90 | FALSE |
100 | GTEx | Thyroid | RP11-316M1.12 | 0.22 | 0.52 | lasso | 4 | 0.52 | 2.4e-45 | 8.26 | -8.5 | 2.6e-17 | -0.83 | 0.77 | 0.23 | FALSE |
101 | GTEx | Uterus | ARNT | 0.35 | 0.07 | lasso | 8 | 0.10 | 4.7e-03 | 9.07 | 6.3 | 2.2e-10 | 0.85 | 0.03 | 0.83 | FALSE |
102 | GTEx | Uterus | RP11-316M1.12 | 0.28 | 0.18 | lasso | 3 | 0.19 | 1.0e-04 | 8.36 | -8.2 | 1.9e-16 | -0.84 | 0.11 | 0.82 | FALSE |
103 | GTEx | Vagina | RP11-316M1.12 | 0.12 | 0.18 | lasso | 2 | 0.11 | 1.5e-03 | 8.29 | -8.5 | 1.6e-17 | -0.82 | 0.12 | 0.73 | FALSE |
104 | GTEx | Whole Blood | CTSK | 0.12 | 0.03 | enet | 18 | 0.03 | 3.7e-04 | 9.09 | 7.0 | 2.0e-12 | 0.83 | 0.01 | 0.99 | FALSE |
105 | GTEx | Whole Blood | ARNT | 0.14 | 0.06 | enet | 12 | 0.13 | 3.5e-12 | 8.59 | 5.4 | 5.4e-08 | 0.79 | 0.02 | 0.98 | FALSE |
106 | GTEx | Whole Blood | GOLPH3L | 0.03 | 0.03 | lasso | 3 | 0.03 | 5.2e-04 | 6.68 | 5.7 | 9.7e-09 | 0.49 | 0.14 | 0.50 | FALSE |
107 | GTEx | Whole Blood | RP11-316M1.12 | 0.09 | 0.16 | lasso | 5 | 0.15 | 1.4e-13 | 8.49 | -8.5 | 1.6e-17 | -0.81 | 0.39 | 0.61 | FALSE |
108 | METSIM | Adipose | ARNT | 0.15 | 0.15 | lasso | 11 | 0.16 | 5.5e-23 | 9.24 | 8.1 | 6.0e-16 | 0.95 | 0.00 | 1.00 | FALSE |
109 | METSIM | Adipose | SCNM1 | 0.06 | 0.06 | lasso | 10 | 0.05 | 3.6e-08 | -5.36 | -5.3 | 1.1e-07 | -0.25 | 0.99 | 0.00 | FALSE |
110 | METSIM | Adipose | TMOD4 | 0.02 | 0.00 | blup | 312 | 0.01 | 3.2e-02 | 1.98 | -6.4 | 2.0e-10 | -0.66 | 0.07 | 0.19 | FALSE |
111 | NTR | Blood | ARNT | 0.04 | 0.03 | enet | 21 | 0.03 | 5.4e-10 | 9.24 | 8.0 | 1.5e-15 | 0.93 | 0.00 | 1.00 | FALSE |
112 | NTR | Blood | CTSK | 0.03 | 0.02 | enet | 22 | 0.02 | 8.1e-08 | 9.07 | 8.0 | 1.4e-15 | 0.89 | 0.01 | 0.99 | FALSE |
113 | YFS | Blood | ARNT | 0.08 | 0.13 | enet | 11 | 0.13 | 4.7e-41 | 9.12 | 8.7 | 3.2e-18 | 0.97 | 0.01 | 0.99 | FALSE |
114 | YFS | Blood | CTSK | 0.45 | 0.39 | enet | 36 | 0.42 | 1.5e-150 | 9.07 | 8.1 | 7.3e-16 | 0.94 | 0.01 | 0.99 | FALSE |
115 | YFS | Blood | CTSS | 0.17 | 0.11 | enet | 42 | 0.17 | 4.2e-52 | 7.95 | 6.5 | 5.7e-11 | 0.68 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CTSS | 0.05 | 0.04 | lasso | 2 | 0.04 | 2.0e-04 | 7.96 | 7.9 | 2.0e-15 | 0.69 | 0.15 | 0.72 | FALSE |
117 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | HORMAD1 | 0.22 | 0.35 | lasso | 12 | 0.37 | 7.6e-33 | 7.39 | 7.6 | 4.2e-14 | 0.72 | 0.99 | 0.01 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CTSS | 0.02 | 0.01 | enet | 4 | 0.01 | 2.8e-03 | 7.41 | 7.9 | 4.0e-15 | 0.78 | 0.16 | 0.22 | TRUE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | HORMAD1 | 0.06 | 0.11 | lasso | 2 | 0.10 | 2.0e-20 | 7.38 | 7.4 | 1.5e-13 | 0.71 | 0.99 | 0.01 | FALSE |
120 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | HORMAD1 | 0.55 | 0.35 | lasso | 4 | 0.37 | 2.9e-19 | 8.82 | 8.9 | 4.0e-19 | 0.87 | 0.03 | 0.97 | FALSE |
121 | The Cancer Genome Atlas | Colon Adenocarcinoma | HORMAD1 | 0.14 | 0.14 | lasso | 7 | 0.13 | 4.8e-08 | 7.39 | 7.2 | 4.3e-13 | 0.68 | 0.52 | 0.48 | FALSE |
122 | The Cancer Genome Atlas | Esophageal Carcinoma | HORMAD1 | 0.31 | 0.36 | enet | 32 | 0.35 | 7.8e-12 | 7.39 | 8.2 | 2.0e-16 | 0.81 | 0.83 | 0.17 | FALSE |
123 | The Cancer Genome Atlas | Glioblastoma Multiforme | ANXA9 | 0.14 | 0.04 | blup | 40 | 0.10 | 5.1e-04 | 8.80 | -6.2 | 6.3e-10 | -0.71 | 0.01 | 0.78 | FALSE |
124 | The Cancer Genome Atlas | Glioblastoma Multiforme | CTSS | 0.08 | 0.03 | blup | 50 | 0.07 | 4.8e-03 | 7.96 | 8.8 | 2.1e-18 | 0.86 | 0.04 | 0.54 | FALSE |
125 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CTSS | 0.05 | 0.03 | blup | 49 | 0.04 | 1.6e-05 | 8.37 | 8.9 | 4.3e-19 | 0.92 | 0.02 | 0.97 | FALSE |
126 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | GOLPH3L | 0.12 | 0.16 | blup | 49 | 0.16 | 4.8e-18 | 7.87 | -6.8 | 1.2e-11 | -0.63 | 0.11 | 0.89 | FALSE |
127 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | HORMAD1 | 0.27 | 0.54 | lasso | 11 | 0.55 | 4.2e-74 | 7.95 | 8.3 | 1.1e-16 | 0.78 | 0.97 | 0.03 | TRUE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ARNT | 0.10 | 0.07 | blup | 44 | 0.07 | 8.0e-08 | 8.59 | 7.8 | 4.9e-15 | 0.90 | 0.01 | 0.99 | FALSE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CTSS | 0.04 | 0.01 | enet | 4 | 0.03 | 4.7e-04 | 9.07 | 8.8 | 1.6e-18 | 0.86 | 0.02 | 0.96 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ANXA9 | 0.05 | 0.02 | blup | 40 | 0.02 | 8.5e-04 | 6.68 | -6.3 | 3.1e-10 | -0.61 | 0.04 | 0.50 | FALSE |
131 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ARNT | 0.11 | 0.08 | blup | 45 | 0.08 | 3.2e-09 | 9.24 | 6.2 | 4.1e-10 | 0.82 | 0.00 | 1.00 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CTSS | 0.29 | 0.08 | lasso | 3 | 0.08 | 1.5e-09 | -4.83 | 6.4 | 2.1e-10 | 0.60 | 0.93 | 0.06 | FALSE |
133 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | ARNT | 0.05 | 0.03 | blup | 45 | 0.04 | 4.7e-03 | 8.88 | 9.0 | 2.9e-19 | 0.94 | 0.02 | 0.78 | FALSE |
134 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | TARS2 | 0.16 | 0.01 | enet | 8 | 0.07 | 4.4e-04 | 3.77 | 5.9 | 4.1e-09 | 0.42 | 0.00 | 0.08 | FALSE |
135 | The Cancer Genome Atlas | Lung Adenocarcinoma | HORMAD1 | 0.22 | 0.40 | lasso | 7 | 0.41 | 7.7e-52 | 7.39 | 7.8 | 8.3e-15 | 0.73 | 0.99 | 0.01 | FALSE |
136 | The Cancer Genome Atlas | Lung Adenocarcinoma | LASS2 | 0.03 | 0.01 | blup | 30 | 0.01 | 1.0e-02 | 8.32 | -5.9 | 3.9e-09 | -0.68 | 0.01 | 0.65 | FALSE |
137 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CTSS | 0.02 | 0.01 | blup | 50 | 0.02 | 1.5e-03 | 7.87 | 8.9 | 6.7e-19 | 0.87 | 0.04 | 0.82 | FALSE |
138 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | GOLPH3L | 0.02 | 0.02 | blup | 49 | 0.01 | 1.6e-02 | 7.25 | -8.1 | 6.5e-16 | -0.80 | 0.03 | 0.66 | FALSE |
139 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | HORMAD1 | 0.26 | 0.47 | lasso | 6 | 0.46 | 2.1e-58 | 8.00 | 8.0 | 1.6e-15 | 0.74 | 0.98 | 0.02 | FALSE |
140 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CTSS | 0.16 | 0.08 | enet | 8 | 0.07 | 1.6e-05 | -4.83 | 7.0 | 2.7e-12 | 0.73 | 0.06 | 0.86 | FALSE |
141 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | HORMAD1 | 0.19 | 0.09 | blup | 44 | 0.12 | 3.3e-08 | 7.95 | 5.4 | 5.6e-08 | 0.42 | 0.71 | 0.29 | FALSE |
142 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CTSS | 0.07 | 0.07 | blup | 50 | 0.07 | 6.4e-04 | 7.40 | 7.2 | 4.9e-13 | 0.64 | 0.11 | 0.29 | FALSE |
143 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ARNT | 0.06 | 0.02 | lasso | 3 | 0.02 | 1.4e-03 | -4.92 | 7.4 | 1.4e-13 | 0.84 | 0.02 | 0.92 | TRUE |
144 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ENSA | 0.02 | 0.01 | enet | 3 | 0.01 | 2.5e-02 | 6.81 | -5.3 | 1.3e-07 | -0.72 | 0.01 | 0.49 | FALSE |
145 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GOLPH3L | 0.03 | 0.01 | blup | 49 | 0.01 | 2.2e-02 | 7.41 | -7.7 | 1.4e-14 | -0.72 | 0.04 | 0.50 | FALSE |
146 | The Cancer Genome Atlas | Rectum Adenocarcinoma | HORMAD1 | 0.19 | 0.14 | blup | 43 | 0.14 | 3.3e-04 | 7.39 | 8.2 | 1.8e-16 | 0.77 | 0.13 | 0.60 | FALSE |
147 | The Cancer Genome Atlas | Soft Tissue Sarcoma | HORMAD1 | 0.14 | 0.15 | blup | 44 | 0.15 | 3.2e-09 | 7.39 | 7.3 | 3.1e-13 | 0.65 | 0.50 | 0.50 | FALSE |
148 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | HORMAD1 | 0.16 | 0.17 | blup | 44 | 0.16 | 4.4e-05 | 7.95 | 8.3 | 7.5e-17 | 0.80 | 0.14 | 0.64 | FALSE |
149 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CTSS | 0.04 | 0.04 | blup | 48 | 0.04 | 6.9e-04 | 8.86 | 8.8 | 1.1e-18 | 0.86 | 0.05 | 0.78 | FALSE |
150 | The Cancer Genome Atlas | Stomach Adenocarcinoma | HORMAD1 | 0.10 | 0.15 | lasso | 6 | 0.15 | 5.9e-11 | 7.40 | 7.7 | 1.6e-14 | 0.73 | 0.56 | 0.44 | FALSE |
151 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LASS2 | 0.03 | 0.03 | blup | 30 | 0.02 | 2.4e-02 | 8.81 | -8.0 | 1.1e-15 | -0.80 | 0.01 | 0.77 | FALSE |
152 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | HORMAD1 | 0.26 | 0.24 | lasso | 13 | 0.30 | 3.2e-11 | 8.82 | 8.7 | 3.5e-18 | 0.81 | 0.26 | 0.74 | FALSE |
153 | The Cancer Genome Atlas | Thyroid Carcinoma | CTSS | 0.11 | 0.23 | lasso | 8 | 0.24 | 1.2e-22 | 8.82 | 8.7 | 3.5e-18 | 0.83 | 0.07 | 0.93 | FALSE |
154 | The Cancer Genome Atlas | Thyroid Carcinoma | GOLPH3L | 0.02 | 0.02 | blup | 49 | 0.01 | 3.0e-02 | 7.96 | 7.9 | 2.0e-15 | 0.74 | 0.04 | 0.57 | FALSE |
155 | The Cancer Genome Atlas | Thyroid Carcinoma | HORMAD1 | 0.19 | 0.14 | lasso | 5 | 0.15 | 8.3e-15 | 7.41 | 7.7 | 1.6e-14 | 0.73 | 0.94 | 0.06 | FALSE |
156 | The Cancer Genome Atlas | Thyroid Carcinoma | LASS2 | 0.04 | 0.04 | blup | 30 | 0.04 | 1.0e-04 | 8.32 | -8.0 | 1.5e-15 | -0.81 | 0.01 | 0.98 | FALSE |
157 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | CTSS | 0.13 | 0.03 | lasso | 8 | 0.05 | 1.9e-02 | 7.39 | 7.3 | 1.9e-13 | 0.70 | 0.03 | 0.20 | FALSE |
158 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | HORMAD1 | 0.16 | 0.11 | enet | 11 | 0.07 | 5.5e-03 | 7.39 | 6.4 | 2.0e-10 | 0.65 | 0.10 | 0.21 | FALSE |